RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 PAGE5Q96GU1 130 aa15.48■□□□□ 0.07
HDAC4-205ENST00000454542 ACAP3Q96P50 834 aa15.48■□□□□ 0.07
HDAC4-205ENST00000454542 TCHPQ9BT92 498 aa15.48■□□□□ 0.07
HDAC4-205ENST00000454542 HERC2P3Q9BVR0 1158 aa15.48■□□□□ 0.07
HDAC4-205ENST00000454542 BLZF1Q9H2G9 400 aa15.48■□□□□ 0.07
HDAC4-205ENST00000454542 NGRNQ9NPE2 291 aaKnown RBP15.48■□□□□ 0.07
HDAC4-205ENST00000454542 CHMP5Q9NZZ3 219 aa15.48■□□□□ 0.07
HDAC4-205ENST00000454542 TBC1D7Q9P0N9 293 aa15.48■□□□□ 0.07
HDAC4-205ENST00000454542 PCDHB13Q9Y5F0 798 aa15.48■□□□□ 0.07
HDAC4-205ENST00000454542 IRAK3Q9Y616 596 aa15.48■□□□□ 0.07
HDAC4-205ENST00000454542 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.47■□□□□ 0.07
HDAC4-205ENST00000454542 SMIM28A0A1B0GU29 152 aa15.47■□□□□ 0.07
HDAC4-205ENST00000454542 TTC26A0AVF1 554 aa15.47■□□□□ 0.07
HDAC4-205ENST00000454542 F8W810 466 aa15.47■□□□□ 0.07
HDAC4-205ENST00000454542 TMEM189-UBE2V1I3L0A0 370 aa15.47■□□□□ 0.07
HDAC4-205ENST00000454542 ALDH2P05091 517 aa15.47■□□□□ 0.07
HDAC4-205ENST00000454542 CLTAP09496 248 aa15.47■□□□□ 0.07
HDAC4-205ENST00000454542 CTSAP10619 480 aa15.47■□□□□ 0.07
HDAC4-205ENST00000454542 ADSSP30520 456 aa15.47■□□□□ 0.07
HDAC4-205ENST00000454542 HOXD13P35453 343 aa15.47■□□□□ 0.07
HDAC4-205ENST00000454542 YARSP54577 528 aaKnown RBP15.47■□□□□ 0.07
HDAC4-205ENST00000454542 POU5F1Q01860 360 aaKnown RBP15.47■□□□□ 0.07
HDAC4-205ENST00000454542 BMT2Q1RMZ1 405 aa15.47■□□□□ 0.07
HDAC4-205ENST00000454542 SLC10A6Q3KNW5 377 aa15.47■□□□□ 0.07
HDAC4-205ENST00000454542 GLRA4Q5JXX5 417 aa15.47■□□□□ 0.07
HDAC4-205ENST00000454542 ZBTB41Q5SVQ8 909 aa15.47■□□□□ 0.07
HDAC4-205ENST00000454542 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.47■□□□□ 0.07
HDAC4-205ENST00000454542 TMEM87AQ8NBN3 555 aa15.47■□□□□ 0.07
HDAC4-205ENST00000454542 HPS3Q969F9 1004 aa15.47■□□□□ 0.07
HDAC4-205ENST00000454542 PABPC5Q96DU9 382 aaKnown RBP15.47■□□□□ 0.07
HDAC4-205ENST00000454542 ZMAT2Q96NC0 199 aaKnown RBP15.47■□□□□ 0.07
HDAC4-205ENST00000454542 ACCSQ96QU6 501 aa15.47■□□□□ 0.07
HDAC4-205ENST00000454542 TCF25Q9BQ70 676 aa15.47■□□□□ 0.07
HDAC4-205ENST00000454542 PAAF1Q9BRP4 392 aa15.47■□□□□ 0.07
HDAC4-205ENST00000454542 IKZF4Q9H2S9 585 aa15.47■□□□□ 0.07
HDAC4-205ENST00000454542 UBE2ZQ9H832 354 aaPredicted RBP15.47■□□□□ 0.07
HDAC4-205ENST00000454542 PUF60Q9UHX1 559 aaKnown RBP15.47■□□□□ 0.07
HDAC4-205ENST00000454542 CPSF3Q9UKF6 684 aaKnown RBP15.47■□□□□ 0.07
HDAC4-205ENST00000454542 COG5Q9UP83 839 aa15.47■□□□□ 0.07
HDAC4-205ENST00000454542 EXOC7Q9UPT5 735 aa15.47■□□□□ 0.07
HDAC4-205ENST00000454542 FAN1Q9Y2M0 1017 aa15.47■□□□□ 0.07
HDAC4-205ENST00000454542 PRG3Q9Y2Y8 225 aaPredicted RBP15.47■□□□□ 0.07
HDAC4-205ENST00000454542 VWA8A3KMH1 1905 aa15.47■□□□□ 0.07
HDAC4-205ENST00000454542 SOD2P04179 222 aa15.46■□□□□ 0.07
HDAC4-205ENST00000454542 CXCL8P10145 99 aa15.46■□□□□ 0.07
HDAC4-205ENST00000454542 TNFSF9P41273 254 aa15.46■□□□□ 0.07
HDAC4-205ENST00000454542 AFMP43652 599 aa15.46■□□□□ 0.07
HDAC4-205ENST00000454542 OR1G1P47890 313 aa15.46■□□□□ 0.07
HDAC4-205ENST00000454542 OSTNP61366 133 aa15.46■□□□□ 0.07
HDAC4-205ENST00000454542 SOX4Q06945 474 aaPredicted RBP15.46■□□□□ 0.07
HDAC4-205ENST00000454542 KCNC3Q14003 757 aa15.46■□□□□ 0.07
HDAC4-205ENST00000454542 HSP90AA2PQ14568 343 aaPredicted RBP15.46■□□□□ 0.07
HDAC4-205ENST00000454542 SMC1AQ14683 1233 aaKnown RBP15.46■□□□□ 0.07
HDAC4-205ENST00000454542 ENOX2Q16206 610 aaKnown RBP15.46■□□□□ 0.07
HDAC4-205ENST00000454542 DUSP6Q16828 381 aa15.46■□□□□ 0.07
HDAC4-205ENST00000454542 SEZ6Q53EL9 994 aa15.46■□□□□ 0.07
HDAC4-205ENST00000454542 PLPP4Q5VZY2 271 aa15.46■□□□□ 0.07
HDAC4-205ENST00000454542 SLFN12LQ6IEE8 588 aa15.46■□□□□ 0.07
HDAC4-205ENST00000454542 KRBA2Q6ZNG9 492 aa15.46■□□□□ 0.07
HDAC4-205ENST00000454542 FMR1NBQ8N0W7 255 aaPredicted RBP15.46■□□□□ 0.07
HDAC4-205ENST00000454542 VPS52Q8N1B4 723 aa15.46■□□□□ 0.07
HDAC4-205ENST00000454542 ENGASEQ8NFI3 743 aa15.46■□□□□ 0.07
HDAC4-205ENST00000454542 PPP2R3CQ969Q6 453 aa15.46■□□□□ 0.07
HDAC4-205ENST00000454542 CDCA3Q99618 268 aaPredicted RBP15.46■□□□□ 0.07
HDAC4-205ENST00000454542 MSTO1Q9BUK6 570 aa15.46■□□□□ 0.07
HDAC4-205ENST00000454542 TMEM206Q9H813 350 aa15.46■□□□□ 0.07
HDAC4-205ENST00000454542 PLEKHA5Q9HAU0 1116 aa15.46■□□□□ 0.07
HDAC4-205ENST00000454542 ENTPD7Q9NQZ7 604 aa15.46■□□□□ 0.07
HDAC4-205ENST00000454542 CACNG4Q9UBN1 327 aa15.46■□□□□ 0.07
HDAC4-205ENST00000454542 FSD2A1L4K1 749 aa15.45■□□□□ 0.06
HDAC4-205ENST00000454542 C2orf71A6NGG8 1288 aa15.45■□□□□ 0.06
HDAC4-205ENST00000454542 CASTOR2A6NHX0 329 aa15.45■□□□□ 0.06
HDAC4-205ENST00000454542 HIDE1A8MVS5 230 aa15.45■□□□□ 0.06
HDAC4-205ENST00000454542 NCK2O43639 380 aa15.45■□□□□ 0.06
HDAC4-205ENST00000454542 LILRB3O75022 631 aa15.45■□□□□ 0.06
HDAC4-205ENST00000454542 PRPF6O94906 941 aaKnown RBP15.45■□□□□ 0.06
HDAC4-205ENST00000454542 ZNF202O95125 648 aa15.45■□□□□ 0.06
HDAC4-205ENST00000454542 CSPG5O95196 566 aa15.45■□□□□ 0.06
HDAC4-205ENST00000454542 KIF4AO95239 1232 aa15.45■□□□□ 0.06
HDAC4-205ENST00000454542 GLP2RO95838 553 aa15.45■□□□□ 0.06
HDAC4-205ENST00000454542 PRR29P0C7W0 189 aa15.45■□□□□ 0.06
HDAC4-205ENST00000454542 GARTP22102 1010 aa15.45■□□□□ 0.06
HDAC4-205ENST00000454542 GTF2F1P35269 517 aaKnown RBP eCLIP15.45■□□□□ 0.06
HDAC4-205ENST00000454542 SNW1Q13573 536 aaKnown RBP15.45■□□□□ 0.06
HDAC4-205ENST00000454542 PTPN14Q15678 1187 aa15.45■□□□□ 0.06
HDAC4-205ENST00000454542 FUT10Q6P4F1 479 aa15.45■□□□□ 0.06
HDAC4-205ENST00000454542 CRELD2Q6UXH1 353 aaPredicted RBP15.45■□□□□ 0.06
HDAC4-205ENST00000454542 STXBP4Q6ZWJ1 553 aa15.45■□□□□ 0.06
HDAC4-205ENST00000454542 GPR65Q8IYL9 337 aa15.45■□□□□ 0.06
HDAC4-205ENST00000454542 EFHBQ8N7U6 833 aa15.45■□□□□ 0.06
HDAC4-205ENST00000454542 ZNF507Q8TCN5 953 aa15.45■□□□□ 0.06
HDAC4-205ENST00000454542 SCFD1Q8WVM8 642 aa15.45■□□□□ 0.06
HDAC4-205ENST00000454542 ATXN2LQ8WWM7 1075 aaKnown RBP15.45■□□□□ 0.06
HDAC4-205ENST00000454542 UROC1Q96N76 676 aa15.45■□□□□ 0.06
HDAC4-205ENST00000454542 SLC38A7Q9NVC3 462 aa15.45■□□□□ 0.06
HDAC4-205ENST00000454542 ADAM28Q9UKQ2 775 aa15.45■□□□□ 0.06
HDAC4-205ENST00000454542 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.45■□□□□ 0.06
HDAC4-205ENST00000454542 TBX10O75333 385 aa15.44■□□□□ 0.06
HDAC4-205ENST00000454542 NR1I2O75469 434 aa15.44■□□□□ 0.06
HDAC4-205ENST00000454542 LTBRP36941 435 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms