RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 PHOX2BQ99453 314 aa20.37■□□□□ 0.85
UBE2D4-208ENST00000454350 ACO2Q99798 780 aaKnown RBP20.37■□□□□ 0.85
UBE2D4-208ENST00000454350 CLSTN3Q9BQT9 956 aa20.37■□□□□ 0.85
UBE2D4-208ENST00000454350 NT5C3AQ9H0P0 336 aa20.37■□□□□ 0.85
UBE2D4-208ENST00000454350 PLEKHA4Q9H4M7 779 aa20.37■□□□□ 0.85
UBE2D4-208ENST00000454350 TNFSF13BQ9Y275 285 aa20.37■□□□□ 0.85
UBE2D4-208ENST00000454350 USP34Q70CQ2 3546 aa20.37■□□□□ 0.85
UBE2D4-208ENST00000454350 PHLPP2Q6ZVD8 1323 aa20.36■□□□□ 0.85
UBE2D4-208ENST00000454350 SPDYE4A6NLX3 237 aa20.36■□□□□ 0.85
UBE2D4-208ENST00000454350 K7ERI5 159 aa20.36■□□□□ 0.85
UBE2D4-208ENST00000454350 ST18O60284 1047 aa20.36■□□□□ 0.85
UBE2D4-208ENST00000454350 GJB2P29033 226 aa20.36■□□□□ 0.85
UBE2D4-208ENST00000454350 TMEM132AQ24JP5 1023 aa20.36■□□□□ 0.85
UBE2D4-208ENST00000454350 RILPL1Q5EBL4 403 aa20.36■□□□□ 0.85
UBE2D4-208ENST00000454350 XKR4Q5GH76 650 aa20.36■□□□□ 0.85
UBE2D4-208ENST00000454350 FAM171A1Q5VUB5 890 aa20.36■□□□□ 0.85
UBE2D4-208ENST00000454350 ALKAL1Q6UXT8 129 aa20.36■□□□□ 0.85
UBE2D4-208ENST00000454350 ACSF2Q96CM8 615 aaPredicted RBP20.36■□□□□ 0.85
UBE2D4-208ENST00000454350 CDT1Q9H211 546 aa20.36■□□□□ 0.85
UBE2D4-208ENST00000454350 TMEM134Q9H6X4 195 aa20.36■□□□□ 0.85
UBE2D4-208ENST00000454350 DAXXQ9UER7 740 aaPredicted RBP20.36■□□□□ 0.85
UBE2D4-208ENST00000454350 MYH15Q9Y2K3 1946 aa20.35■□□□□ 0.85
UBE2D4-208ENST00000454350 CLUHO75153 1309 aa20.35■□□□□ 0.85
UBE2D4-208ENST00000454350 TMEM189-UBE2V1I3L0A0 370 aa20.35■□□□□ 0.85
UBE2D4-208ENST00000454350 MEFVO15553 781 aaPredicted RBP20.35■□□□□ 0.85
UBE2D4-208ENST00000454350 ADAM12O43184 909 aa20.35■□□□□ 0.85
UBE2D4-208ENST00000454350 PROZP22891 400 aa20.35■□□□□ 0.85
UBE2D4-208ENST00000454350 MRE11P49959 708 aa20.35■□□□□ 0.85
UBE2D4-208ENST00000454350 GLRA4Q5JXX5 417 aa20.35■□□□□ 0.85
UBE2D4-208ENST00000454350 MCTP1Q6DN14 999 aa20.35■□□□□ 0.85
UBE2D4-208ENST00000454350 SMG7Q92540 1137 aaKnown RBP20.35■□□□□ 0.85
UBE2D4-208ENST00000454350 MYADMQ96S97 322 aa20.35■□□□□ 0.85
UBE2D4-208ENST00000454350 NTPCRQ9BSD7 190 aaKnown RBP20.35■□□□□ 0.85
UBE2D4-208ENST00000454350 TTPALQ9BTX7 342 aa20.35■□□□□ 0.85
UBE2D4-208ENST00000454350 KCNK12Q9HB15 430 aa20.35■□□□□ 0.85
UBE2D4-208ENST00000454350 ZDHHC7Q9NXF8 308 aa20.35■□□□□ 0.85
UBE2D4-208ENST00000454350 DPP7Q9UHL4 492 aa20.35■□□□□ 0.85
UBE2D4-208ENST00000454350 FBXW11Q9UKB1 542 aa20.35■□□□□ 0.85
UBE2D4-208ENST00000454350 KIF3AQ9Y496 699 aa20.35■□□□□ 0.85
UBE2D4-208ENST00000454350 CCDC169A6NNP5 214 aa20.34■□□□□ 0.85
UBE2D4-208ENST00000454350 FGFR3P22607 806 aa20.34■□□□□ 0.85
UBE2D4-208ENST00000454350 GUCY2CP25092 1073 aa20.34■□□□□ 0.85
UBE2D4-208ENST00000454350 GRM5P41594 1212 aa20.34■□□□□ 0.85
UBE2D4-208ENST00000454350 CREMQ03060 361 aa20.34■□□□□ 0.85
UBE2D4-208ENST00000454350 SOX4Q06945 474 aaPredicted RBP20.34■□□□□ 0.85
UBE2D4-208ENST00000454350 TMEM105Q8N8V8 129 aa20.34■□□□□ 0.85
UBE2D4-208ENST00000454350 C3orf58Q8NDZ4 430 aa20.34■□□□□ 0.85
UBE2D4-208ENST00000454350 PRRX2Q99811 253 aa20.34■□□□□ 0.85
UBE2D4-208ENST00000454350 TARS2Q9BW92 718 aaKnown RBP20.34■□□□□ 0.85
UBE2D4-208ENST00000454350 PRKD2Q9BZL6 878 aa20.34■□□□□ 0.85
UBE2D4-208ENST00000454350 MYO15AQ9UKN7 3530 aa20.34■□□□□ 0.85
UBE2D4-208ENST00000454350 SMIM28A0A1B0GU29 152 aa20.33■□□□□ 0.85
UBE2D4-208ENST00000454350 SFI1A8K8P3 1242 aa20.33■□□□□ 0.85
UBE2D4-208ENST00000454350 ZMYND10O75800 440 aa20.33■□□□□ 0.85
UBE2D4-208ENST00000454350 CLCNKBP51801 687 aa20.33■□□□□ 0.85
UBE2D4-208ENST00000454350 PTPN5P54829 565 aa20.33■□□□□ 0.85
UBE2D4-208ENST00000454350 SLC12A3P55017 1021 aa20.33■□□□□ 0.85
UBE2D4-208ENST00000454350 TDGQ13569 410 aa20.33■□□□□ 0.85
UBE2D4-208ENST00000454350 PSMD5Q16401 504 aa20.33■□□□□ 0.85
UBE2D4-208ENST00000454350 UPP1Q16831 310 aa20.33■□□□□ 0.85
UBE2D4-208ENST00000454350 SYT2Q8N9I0 419 aaPredicted RBP20.33■□□□□ 0.85
UBE2D4-208ENST00000454350 LRRC15Q8TF66 581 aa20.33■□□□□ 0.85
UBE2D4-208ENST00000454350 DRC1Q96MC2 740 aa20.33■□□□□ 0.85
UBE2D4-208ENST00000454350 ZMAT2Q96NC0 199 aaKnown RBP20.33■□□□□ 0.85
UBE2D4-208ENST00000454350 C17orf75Q9HAS0 396 aa20.33■□□□□ 0.85
UBE2D4-208ENST00000454350 GOLGA2P5Q9HBQ8 144 aa20.33■□□□□ 0.85
UBE2D4-208ENST00000454350 KMT5AQ9NQR1 393 aa20.33■□□□□ 0.85
UBE2D4-208ENST00000454350 EPS15L1Q9UBC2 864 aa20.33■□□□□ 0.85
UBE2D4-208ENST00000454350 DUSP12Q9UNI6 340 aa20.33■□□□□ 0.85
UBE2D4-208ENST00000454350 SLC16A4O15374 487 aa20.32■□□□□ 0.84
UBE2D4-208ENST00000454350 DMP1Q13316 513 aaPredicted RBP20.32■□□□□ 0.84
UBE2D4-208ENST00000454350 TMEM119Q4V9L6 283 aa20.32■□□□□ 0.84
UBE2D4-208ENST00000454350 ARL6IP4Q66PJ3 421 aaKnown RBP20.32■□□□□ 0.84
UBE2D4-208ENST00000454350 ELMSAN1Q6PJG2 1045 aa20.32■□□□□ 0.84
UBE2D4-208ENST00000454350 DCLRE1AQ6PJP8 1040 aa20.32■□□□□ 0.84
UBE2D4-208ENST00000454350 RSPO2Q6UXX9 243 aaPredicted RBP20.32■□□□□ 0.84
UBE2D4-208ENST00000454350 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.32■□□□□ 0.84
UBE2D4-208ENST00000454350 CEP57Q86XR8 500 aa20.32■□□□□ 0.84
UBE2D4-208ENST00000454350 RSAD2Q8WXG1 361 aa20.32■□□□□ 0.84
UBE2D4-208ENST00000454350 TBC1D32Q96NH3 1257 aa20.32■□□□□ 0.84
UBE2D4-208ENST00000454350 MRPL4Q9BYD3 311 aaKnown RBP20.32■□□□□ 0.84
UBE2D4-208ENST00000454350 IGSF9Q9P2J2 1179 aa20.32■□□□□ 0.84
UBE2D4-208ENST00000454350 RBM19Q9Y4C8 960 aaKnown RBP20.32■□□□□ 0.84
UBE2D4-208ENST00000454350 ANK1P16157 1881 aa20.31■□□□□ 0.84
UBE2D4-208ENST00000454350 VWA3AA6NCI4 1184 aa20.31■□□□□ 0.84
UBE2D4-208ENST00000454350 NPR3P17342 541 aa20.31■□□□□ 0.84
UBE2D4-208ENST00000454350 ELAVL2Q12926 359 aaKnown RBP20.31■□□□□ 0.84
UBE2D4-208ENST00000454350 ZNF568Q3ZCX4 644 aa20.31■□□□□ 0.84
UBE2D4-208ENST00000454350 ARSHQ5FYA8 562 aa20.31■□□□□ 0.84
UBE2D4-208ENST00000454350 KCTD17Q8N5Z5 321 aa20.31■□□□□ 0.84
UBE2D4-208ENST00000454350 TMEM161BQ8NDZ6 487 aa20.31■□□□□ 0.84
UBE2D4-208ENST00000454350 SPIRE2Q8WWL2 714 aa20.31■□□□□ 0.84
UBE2D4-208ENST00000454350 ZBTB45Q96K62 511 aaPredicted RBP20.31■□□□□ 0.84
UBE2D4-208ENST00000454350 PLIN2Q99541 437 aa20.31■□□□□ 0.84
UBE2D4-208ENST00000454350 TIPINQ9BVW5 301 aa20.31■□□□□ 0.84
UBE2D4-208ENST00000454350 NARSO43776 548 aaKnown RBP20.3■□□□□ 0.84
UBE2D4-208ENST00000454350 B3GAT3O94766 335 aa20.3■□□□□ 0.84
UBE2D4-208ENST00000454350 MCF2P10911 925 aa20.3■□□□□ 0.84
UBE2D4-208ENST00000454350 OSTNP61366 133 aa20.3■□□□□ 0.84
UBE2D4-208ENST00000454350 RAD51AP2Q09MP3 1159 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms