RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 CCDC195A0A1B0GUA6 201 aa14.14□□□□□ -0.15
CHD3-206ENST00000452447 SLC16A4O15374 487 aa14.14□□□□□ -0.15
CHD3-206ENST00000452447 KIF4AO95239 1232 aa14.14□□□□□ -0.15
CHD3-206ENST00000452447 C1RP00736 705 aa14.14□□□□□ -0.15
CHD3-206ENST00000452447 PLA2G4BP0C869 781 aa14.14□□□□□ -0.15
CHD3-206ENST00000452447 SPATA31D3P0C874 917 aa14.14□□□□□ -0.15
CHD3-206ENST00000452447 MYBP10242 640 aa14.14□□□□□ -0.15
CHD3-206ENST00000452447 PDCP20941 246 aa14.14□□□□□ -0.15
CHD3-206ENST00000452447 ELAVL2Q12926 359 aaKnown RBP14.14□□□□□ -0.15
CHD3-206ENST00000452447 STRN3Q13033 797 aa14.14□□□□□ -0.15
CHD3-206ENST00000452447 MAPK7Q13164 816 aa14.14□□□□□ -0.15
CHD3-206ENST00000452447 MTMR3Q13615 1198 aa14.14□□□□□ -0.15
CHD3-206ENST00000452447 SPATA31D4Q6ZUB0 917 aa14.14□□□□□ -0.15
CHD3-206ENST00000452447 OTOP3Q7RTS5 596 aa14.14□□□□□ -0.15
CHD3-206ENST00000452447 KREMEN2Q8NCW0 462 aa14.14□□□□□ -0.15
CHD3-206ENST00000452447 CMASQ8NFW8 434 aaPredicted RBP14.14□□□□□ -0.15
CHD3-206ENST00000452447 CALML4Q96GE6 196 aa14.14□□□□□ -0.15
CHD3-206ENST00000452447 NTPCRQ9BSD7 190 aaKnown RBP14.14□□□□□ -0.15
CHD3-206ENST00000452447 TTPALQ9BTX7 342 aa14.14□□□□□ -0.15
CHD3-206ENST00000452447 TARS2Q9BW92 718 aaKnown RBP14.14□□□□□ -0.15
CHD3-206ENST00000452447 PLEKHA4Q9H4M7 779 aa14.14□□□□□ -0.15
CHD3-206ENST00000452447 LIMD1Q9UGP4 676 aa14.14□□□□□ -0.15
CHD3-206ENST00000452447 DENND4AQ7Z401 1863 aa14.14□□□□□ -0.15
CHD3-206ENST00000452447 VPS37CA5D8V6 355 aaPredicted RBP14.13□□□□□ -0.15
CHD3-206ENST00000452447 SLC26A4O43511 780 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 TGM5O43548 720 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 B3GAT3O94766 335 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 PLS3P13797 630 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 RPL17P18621 184 aaKnown RBP14.13□□□□□ -0.15
CHD3-206ENST00000452447 GRM5P41594 1212 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 SLC12A3P55017 1021 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 OSTNP61366 133 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 NAB2Q15742 525 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 RTP2Q5QGT7 225 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 PDXDC1Q6P996 788 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 CYP26C1Q6V0L0 522 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 UBALD2Q8IYN6 164 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 ZDHHC14Q8IZN3 488 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 RASSF8Q8NHQ8 419 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 FEZF2Q8TBJ5 459 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 SPIRE2Q8WWL2 714 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 CDT1Q9H211 546 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 KCNH6Q9H252 994 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 PIDD1Q9HB75 910 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 LARSQ9P2J5 1176 aaKnown RBP14.13□□□□□ -0.15
CHD3-206ENST00000452447 VWA8A3KMH1 1905 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 DOCK6Q96HP0 2047 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 RFPL2O75678 378 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 ASGR2P07307 311 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 CUL4AQ13619 759 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 TMEM119Q4V9L6 283 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 DCLRE1AQ6PJP8 1040 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 PRSS55Q6UWB4 352 aaPredicted RBP14.13□□□□□ -0.15
CHD3-206ENST00000452447 TAS1R3Q7RTX0 852 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 CEP120Q8N960 986 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 PIK3R5Q8WYR1 880 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 SMG7Q92540 1137 aaKnown RBP14.13□□□□□ -0.15
CHD3-206ENST00000452447 STAMQ92783 540 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 UROC1Q96N76 676 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 ACAP3Q96P50 834 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 PPP1R10Q96QC0 940 aaKnown RBP14.13□□□□□ -0.15
CHD3-206ENST00000452447 PTPRHQ9HD43 1115 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 SLC38A7Q9NVC3 462 aa14.13□□□□□ -0.15
CHD3-206ENST00000452447 CACNA1HO95180 2353 aa14.12□□□□□ -0.15
CHD3-206ENST00000452447 SMIM28A0A1B0GU29 152 aa14.12□□□□□ -0.15
CHD3-206ENST00000452447 TRAPPC3O43617 180 aa14.12□□□□□ -0.15
CHD3-206ENST00000452447 MCF2P10911 925 aa14.12□□□□□ -0.15
CHD3-206ENST00000452447 HARSP12081 509 aaKnown RBP14.12□□□□□ -0.15
CHD3-206ENST00000452447 LONP1P36776 959 aaKnown RBP14.12□□□□□ -0.15
CHD3-206ENST00000452447 CLCNKBP51801 687 aa14.12□□□□□ -0.15
CHD3-206ENST00000452447 SF3A1Q15459 793 aaKnown RBP14.12□□□□□ -0.15
CHD3-206ENST00000452447 PSMD5Q16401 504 aa14.12□□□□□ -0.15
CHD3-206ENST00000452447 MPZL3Q6UWV2 235 aa14.12□□□□□ -0.15
CHD3-206ENST00000452447 FBXL6Q8N531 539 aa14.12□□□□□ -0.15
CHD3-206ENST00000452447 TMEM161BQ8NDZ6 487 aa14.12□□□□□ -0.15
CHD3-206ENST00000452447 LNX1Q8TBB1 728 aaPredicted RBP14.12□□□□□ -0.15
CHD3-206ENST00000452447 ASIC4Q96FT7 647 aa14.12□□□□□ -0.15
CHD3-206ENST00000452447 ZDHHC7Q9NXF8 308 aa14.12□□□□□ -0.15
CHD3-206ENST00000452447 ANKFY1Q9P2R3 1169 aa14.12□□□□□ -0.15
CHD3-206ENST00000452447 DOCK8Q8NF50 2099 aa14.12□□□□□ -0.15
CHD3-206ENST00000452447 NPHP3-ACAD11A0A0J9YXS1 232 aa14.11□□□□□ -0.15
CHD3-206ENST00000452447 H0YCG3 227 aa14.11□□□□□ -0.15
CHD3-206ENST00000452447 TMEM189-UBE2V1I3L0A0 370 aa14.11□□□□□ -0.15
CHD3-206ENST00000452447 TOM1L1O75674 476 aa14.11□□□□□ -0.15
CHD3-206ENST00000452447 BRD1O95696 1058 aa14.11□□□□□ -0.15
CHD3-206ENST00000452447 PROZP22891 400 aa14.11□□□□□ -0.15
CHD3-206ENST00000452447 MATR3P43243 847 aaKnown RBP eCLIP14.11□□□□□ -0.15
CHD3-206ENST00000452447 CACNB1Q02641 598 aaPredicted RBP14.11□□□□□ -0.15
CHD3-206ENST00000452447 DHX8Q14562 1220 aaKnown RBP14.11□□□□□ -0.15
CHD3-206ENST00000452447 UPP1Q16831 310 aa14.11□□□□□ -0.15
CHD3-206ENST00000452447 LILRA6Q6PI73 481 aa14.11□□□□□ -0.15
CHD3-206ENST00000452447 ALKAL1Q6UXT8 129 aa14.11□□□□□ -0.15
CHD3-206ENST00000452447 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.11□□□□□ -0.15
CHD3-206ENST00000452447 RHOBTB2Q9BYZ6 727 aa14.11□□□□□ -0.15
CHD3-206ENST00000452447 WDR6Q9NNW5 1121 aaKnown RBP14.11□□□□□ -0.15
CHD3-206ENST00000452447 ODF2LQ9ULJ1 636 aa14.11□□□□□ -0.15
CHD3-206ENST00000452447 CLDN3O15551 220 aa14.1□□□□□ -0.15
CHD3-206ENST00000452447 KRT18P05783 430 aaKnown RBP14.1□□□□□ -0.15
CHD3-206ENST00000452447 MAPTP10636 758 aaKnown RBP14.1□□□□□ -0.15
CHD3-206ENST00000452447 GBP2P32456 591 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms