RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 TCEAL6Q6IPX3 200 aa8.93□□□□□ -0.98
LINC01961-201ENST00000449954 LILRA6Q6PI73 481 aa8.93□□□□□ -0.98
LINC01961-201ENST00000449954 ZNF605Q86T29 641 aa8.93□□□□□ -0.98
LINC01961-201ENST00000449954 KBTBD6Q86V97 674 aa8.93□□□□□ -0.98
LINC01961-201ENST00000449954 PALB2Q86YC2 1186 aa8.93□□□□□ -0.98
LINC01961-201ENST00000449954 SIRT2Q8IXJ6 389 aa8.93□□□□□ -0.98
LINC01961-201ENST00000449954 STAG2Q8N3U4 1231 aa8.93□□□□□ -0.98
LINC01961-201ENST00000449954 METTL13Q8N6R0 699 aa8.93□□□□□ -0.98
LINC01961-201ENST00000449954 IRF7Q92985 503 aa8.93□□□□□ -0.98
LINC01961-201ENST00000449954 TCEAL3Q969E4 200 aa8.93□□□□□ -0.98
LINC01961-201ENST00000449954 ELSPBP1Q96BH3 223 aa8.93□□□□□ -0.98
LINC01961-201ENST00000449954 LRIG1Q96JA1 1093 aa8.93□□□□□ -0.98
LINC01961-201ENST00000449954 ZC3H10Q96K80 434 aaKnown RBP8.93□□□□□ -0.98
LINC01961-201ENST00000449954 MBOAT7Q96N66 472 aa8.93□□□□□ -0.98
LINC01961-201ENST00000449954 FAM193BQ96PV7 902 aaPredicted RBP8.93□□□□□ -0.98
LINC01961-201ENST00000449954 ZSCAN10Q96SZ4 725 aaPredicted RBP8.93□□□□□ -0.98
LINC01961-201ENST00000449954 SLC32A1Q9H598 525 aa8.93□□□□□ -0.98
LINC01961-201ENST00000449954 BRD9Q9H8M2 597 aa8.93□□□□□ -0.98
LINC01961-201ENST00000449954 TMEM9BQ9NQ34 198 aa8.93□□□□□ -0.98
LINC01961-201ENST00000449954 GDE1Q9NZC3 331 aa8.93□□□□□ -0.98
LINC01961-201ENST00000449954 KANSL3Q9P2N6 904 aa8.93□□□□□ -0.98
LINC01961-201ENST00000449954 AKT3Q9Y243 479 aa8.93□□□□□ -0.98
LINC01961-201ENST00000449954 MAP4K5Q9Y4K4 846 aa8.93□□□□□ -0.98
LINC01961-201ENST00000449954 RAI2Q9Y5P3 530 aa8.93□□□□□ -0.98
LINC01961-201ENST00000449954 UBIAD1Q9Y5Z9 338 aa8.93□□□□□ -0.98
LINC01961-201ENST00000449954 PIAS3Q9Y6X2 628 aa8.93□□□□□ -0.98
LINC01961-201ENST00000449954 NFASCO94856 1347 aa8.93□□□□□ -0.98
LINC01961-201ENST00000449954 NEDD4P46934 1319 aa8.93□□□□□ -0.98
LINC01961-201ENST00000449954 IGKV6D-21A0A0A0MT36 114 aa8.92□□□□□ -0.98
LINC01961-201ENST00000449954 ZBTB42B2RXF5 422 aa8.92□□□□□ -0.98
LINC01961-201ENST00000449954 NRP1O14786 923 aa8.92□□□□□ -0.98
LINC01961-201ENST00000449954 B4GALT3O60512 393 aa8.92□□□□□ -0.98
LINC01961-201ENST00000449954 OFD1O75665 1012 aa8.92□□□□□ -0.98
LINC01961-201ENST00000449954 WFS1O76024 890 aa8.92□□□□□ -0.98
LINC01961-201ENST00000449954 ATG7O95352 703 aa8.92□□□□□ -0.98
LINC01961-201ENST00000449954 MLLT6P55198 1093 aaPredicted RBP8.92□□□□□ -0.98
LINC01961-201ENST00000449954 NTHL1P78549 312 aa8.92□□□□□ -0.98
LINC01961-201ENST00000449954 TSHZ3Q63HK5 1081 aa8.92□□□□□ -0.98
LINC01961-201ENST00000449954 TBC1D10CQ8IV04 446 aa8.92□□□□□ -0.98
LINC01961-201ENST00000449954 ENAHQ8N8S7 591 aaPredicted RBP8.92□□□□□ -0.98
LINC01961-201ENST00000449954 ITFG1Q8TB96 612 aa8.92□□□□□ -0.98
LINC01961-201ENST00000449954 PGBD4Q96DM1 585 aa8.92□□□□□ -0.98
LINC01961-201ENST00000449954 SCLT1Q96NL6 688 aa8.92□□□□□ -0.98
LINC01961-201ENST00000449954 PIGSQ96S52 555 aa8.92□□□□□ -0.98
LINC01961-201ENST00000449954 HNRNPABQ99729 332 aaKnown RBP8.92□□□□□ -0.98
LINC01961-201ENST00000449954 RIOX1Q9H6W3 641 aa8.92□□□□□ -0.98
LINC01961-201ENST00000449954 JADE2Q9NQC1 790 aa8.92□□□□□ -0.98
LINC01961-201ENST00000449954 FBXW11Q9UKB1 542 aa8.92□□□□□ -0.98
LINC01961-201ENST00000449954 CEP131Q9UPN4 1083 aa8.92□□□□□ -0.98
LINC01961-201ENST00000449954 TICRRQ7Z2Z1 1910 aa8.92□□□□□ -0.98
LINC01961-201ENST00000449954 APC2O95996 2303 aa8.91□□□□□ -0.98
LINC01961-201ENST00000449954 TTC41PQ6P2S7 1318 aa8.91□□□□□ -0.98
LINC01961-201ENST00000449954 BACH1O14867 736 aa8.91□□□□□ -0.98
LINC01961-201ENST00000449954 MAGEB2O15479 319 aa8.91□□□□□ -0.98
LINC01961-201ENST00000449954 ZNF623O75123 536 aa8.91□□□□□ -0.98
LINC01961-201ENST00000449954 C1QL1O75973 258 aa8.91□□□□□ -0.98
LINC01961-201ENST00000449954 EFEMP2O95967 443 aa8.91□□□□□ -0.98
LINC01961-201ENST00000449954 HAND2P61296 217 aa8.91□□□□□ -0.98
LINC01961-201ENST00000449954 SCAPQ12770 1279 aa8.91□□□□□ -0.98
LINC01961-201ENST00000449954 ELF2Q15723 593 aa8.91□□□□□ -0.98
LINC01961-201ENST00000449954 PABPC1LQ4VXU2 614 aaKnown RBP8.91□□□□□ -0.98
LINC01961-201ENST00000449954 PPM1LQ5SGD2 360 aa8.91□□□□□ -0.98
LINC01961-201ENST00000449954 TWF2Q6IBS0 349 aaKnown RBP8.91□□□□□ -0.98
LINC01961-201ENST00000449954 USP17L6PQ6QN14 398 aa8.91□□□□□ -0.98
LINC01961-201ENST00000449954 DEFB124Q8NES8 71 aa8.91□□□□□ -0.98
LINC01961-201ENST00000449954 HNRNPLLQ8WVV9 542 aaKnown RBP8.91□□□□□ -0.98
LINC01961-201ENST00000449954 LPPQ93052 612 aa8.91□□□□□ -0.98
LINC01961-201ENST00000449954 TRMT61BQ9BVS5 477 aaKnown RBP8.91□□□□□ -0.98
LINC01961-201ENST00000449954 CCDC86Q9H6F5 360 aaKnown RBP8.91□□□□□ -0.98
LINC01961-201ENST00000449954 CHST7Q9NS84 486 aa8.91□□□□□ -0.98
LINC01961-201ENST00000449954 FAM105AQ9NUU6 356 aa8.91□□□□□ -0.98
LINC01961-201ENST00000449954 MARCH5Q9NX47 278 aa8.91□□□□□ -0.98
LINC01961-201ENST00000449954 MAD2L2Q9UI95 211 aa8.91□□□□□ -0.98
LINC01961-201ENST00000449954 POLIQ9UNA4 740 aa8.91□□□□□ -0.98
LINC01961-201ENST00000449954 CNTNAP2Q9UHC6 1331 aa8.9□□□□□ -0.98
LINC01961-201ENST00000449954 PALM3A6NDB9 673 aaPredicted RBP8.9□□□□□ -0.98
LINC01961-201ENST00000449954 J3QKU1 62 aa8.9□□□□□ -0.98
LINC01961-201ENST00000449954 MEIS2O14770 477 aa8.9□□□□□ -0.98
LINC01961-201ENST00000449954 SMARCA5O60264 1052 aaPredicted RBP8.9□□□□□ -0.98
LINC01961-201ENST00000449954 DDHD2O94830 711 aa8.9□□□□□ -0.98
LINC01961-201ENST00000449954 CAVIN2O95810 425 aa8.9□□□□□ -0.98
LINC01961-201ENST00000449954 C8AP07357 584 aa8.9□□□□□ -0.98
LINC01961-201ENST00000449954 SFPQP23246 707 aaKnown RBP eCLIP8.9□□□□□ -0.98
LINC01961-201ENST00000449954 GPC3P51654 580 aa8.9□□□□□ -0.98
LINC01961-201ENST00000449954 CLCN3P51790 818 aa8.9□□□□□ -0.98
LINC01961-201ENST00000449954 DGKKQ5KSL6 1271 aa8.9□□□□□ -0.98
LINC01961-201ENST00000449954 C6orf118Q5T5N4 469 aa8.9□□□□□ -0.98
LINC01961-201ENST00000449954 IFIT1BQ5T764 474 aaKnown RBP8.9□□□□□ -0.98
LINC01961-201ENST00000449954 TAS1R1Q7RTX1 841 aa8.9□□□□□ -0.98
LINC01961-201ENST00000449954 CCDC116Q8IYX3 515 aa8.9□□□□□ -0.98
LINC01961-201ENST00000449954 LSM14AQ8ND56 463 aaKnown RBP8.9□□□□□ -0.98
LINC01961-201ENST00000449954 KCTD15Q96SI1 283 aaPredicted RBP8.9□□□□□ -0.98
LINC01961-201ENST00000449954 PLA2G2FQ9BZM2 168 aa8.9□□□□□ -0.98
LINC01961-201ENST00000449954 HELLSQ9NRZ9 838 aa8.9□□□□□ -0.98
LINC01961-201ENST00000449954 KCNH7Q9NS40 1196 aa8.9□□□□□ -0.98
LINC01961-201ENST00000449954 PRG3Q9Y2Y8 225 aaPredicted RBP8.9□□□□□ -0.98
LINC01961-201ENST00000449954 DOCK6Q96HP0 2047 aa8.89□□□□□ -0.99
LINC01961-201ENST00000449954 BCLAF3A2AJT9 711 aaKnown RBP8.89□□□□□ -0.99
LINC01961-201ENST00000449954 CAPN8A6NHC0 703 aa8.89□□□□□ -0.99
LINC01961-201ENST00000449954 MEIS3P2A8K0S8 358 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms