RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 PSD3Q9NYI0 1048 aa7.6□□□□□ -1.19
BEST1-202ENST00000449131 SUCLA2Q9P2R7 463 aaPredicted RBP7.6□□□□□ -1.19
BEST1-202ENST00000449131 UVRAGQ9P2Y5 699 aa7.6□□□□□ -1.19
BEST1-202ENST00000449131 M0QYV0 167 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 CHUKO15111 745 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 SPAG7O75391 227 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 GPC4O75487 556 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 AKAP3O75969 853 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 MYBL1P10243 752 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 PPM1FP49593 454 aaPredicted RBP7.59□□□□□ -1.19
BEST1-202ENST00000449131 STAT5BP51692 787 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 CDK17Q00537 523 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 COG2Q14746 738 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 C2CD6Q53TS8 623 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 RSBN1LQ6PCB5 846 aaPredicted RBP7.59□□□□□ -1.19
BEST1-202ENST00000449131 SIX6OS1Q8N1H7 587 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 KIF2BQ8N4N8 673 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 DCLK2Q8N568 766 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 GBP5Q96PP8 586 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 TGS1Q96RS0 853 aaKnown RBP7.59□□□□□ -1.19
BEST1-202ENST00000449131 KIFC3Q9BVG8 833 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 TMEM117Q9H0C3 514 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 THAP2Q9H0W7 228 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 ISCUQ9H1K1 167 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 ALG13Q9NP73 1137 aaKnown RBP7.59□□□□□ -1.19
BEST1-202ENST00000449131 BCAP29Q9UHQ4 241 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 DCTN4Q9UJW0 460 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 COPEO14579 308 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 EPHB6O15197 1021 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 TPD52L2O43399 206 aaKnown RBP7.59□□□□□ -1.19
BEST1-202ENST00000449131 GSTA1P08263 222 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 GSTA2P09210 222 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 ARP10275 920 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 CIITAP33076 1130 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 ARSEP51690 589 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 TMPRSS15P98073 1019 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 TRADDQ15628 312 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 PPM1NQ8N819 430 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 TSEN2Q8NCE0 465 aaKnown RBP7.59□□□□□ -1.19
BEST1-202ENST00000449131 CASKIN2Q8WXE0 1202 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 LPAR1Q92633 364 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 TTC25Q96NG3 672 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 ERP44Q9BS26 406 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 KLC4Q9NSK0 619 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 PARVAQ9NVD7 372 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 KRT7P08729 469 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 PHKA2P46019 1235 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 RPS6P62753 249 aaKnown RBP7.59□□□□□ -1.19
BEST1-202ENST00000449131 NFX1Q12986 1120 aaKnown RBP7.59□□□□□ -1.19
BEST1-202ENST00000449131 PRPSAP1Q14558 356 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 LONRF1Q17RB8 773 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 WDR72Q3MJ13 1102 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 FAM102AQ5T9C2 384 aaPredicted RBP7.59□□□□□ -1.19
BEST1-202ENST00000449131 MAP3K21Q5TCX8 1036 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 ZC3H18Q86VM9 953 aaKnown RBP7.59□□□□□ -1.19
BEST1-202ENST00000449131 TMEM139Q8IV31 216 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 DEPDC1BQ8WUY9 529 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 SLC10A4Q96EP9 437 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 TAAR1Q96RJ0 339 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 TIPINQ9BVW5 301 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 TEX13BQ9BXU2 312 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 KLC2Q9H0B6 622 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 AP5M1Q9H0R1 490 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 HSD3B7Q9H2F3 369 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 UNC45AQ9H3U1 944 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 YY1AP1Q9H869 796 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 GPRC5CQ9NQ84 441 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 DCCP43146 1447 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 RIC1Q4ADV7 1423 aa7.59□□□□□ -1.19
BEST1-202ENST00000449131 MED1Q15648 1581 aaPredicted RBP7.59□□□□□ -1.2
BEST1-202ENST00000449131 LRRC10BA6NIK2 292 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 OPHN1O60890 802 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 CHN1P15882 459 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 SREBF1P36956 1147 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 NR1H3Q13133 447 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 TAF11Q15544 211 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 GRIK5Q16478 980 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 LRIG3Q6UXM1 1119 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 ZNF571Q7Z3V5 609 aaPredicted RBP7.58□□□□□ -1.2
BEST1-202ENST00000449131 LRP10Q7Z4F1 713 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 CYP2W1Q8TAV3 490 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 SPIRE2Q8WWL2 714 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 OTUD5Q96G74 571 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 TRIM55Q9BYV6 548 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 NUF2Q9BZD4 464 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 BLOC1S4Q9NUP1 217 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 TLK1Q9UKI8 766 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 TPX2Q9ULW0 747 aaKnown RBP7.58□□□□□ -1.2
BEST1-202ENST00000449131 TACC3Q9Y6A5 838 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 F5H423 210 aaPredicted RBP7.58□□□□□ -1.2
BEST1-202ENST00000449131 FOXP2O15409 715 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 NOL3O60936 208 aaKnown RBP7.58□□□□□ -1.2
BEST1-202ENST00000449131 HLA-DRAP01903 254 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 PDHA1P08559 390 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 PRLRP16471 622 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 SDC4P31431 198 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 CDH6P55285 790 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 KCNK18Q7Z418 384 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 MCUQ8NE86 351 aa7.58□□□□□ -1.2
BEST1-202ENST00000449131 ZDHHC15Q96MV8 337 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms