RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 HOXD13P35453 343 aa23.97■■□□□ 1.43
APOE-204ENST00000446996 PTPROQ16827 1216 aa23.97■■□□□ 1.43
APOE-204ENST00000446996 SPPL3Q8TCT6 385 aa23.97■■□□□ 1.43
APOE-204ENST00000446996 MYLIPQ8WY64 445 aa23.97■■□□□ 1.43
APOE-204ENST00000446996 SNX27Q96L92 541 aa23.97■■□□□ 1.43
APOE-204ENST00000446996 CNTN3Q9P232 1028 aa23.97■■□□□ 1.43
APOE-204ENST00000446996 CPSF3Q9UKF6 684 aaKnown RBP23.97■■□□□ 1.43
APOE-204ENST00000446996 STXBP5LQ9Y2K9 1186 aa23.97■■□□□ 1.43
APOE-204ENST00000446996 COL4A4P53420 1690 aaPredicted RBP23.96■■□□□ 1.43
APOE-204ENST00000446996 CHD7Q9P2D1 2997 aa23.96■■□□□ 1.43
APOE-204ENST00000446996 GOLGA6L22H0YM25 854 aa23.96■■□□□ 1.43
APOE-204ENST00000446996 RFXAPO00287 272 aa23.96■■□□□ 1.43
APOE-204ENST00000446996 ZC3H11AO75152 810 aaKnown RBP eCLIP23.96■■□□□ 1.43
APOE-204ENST00000446996 FGF18O76093 207 aa23.96■■□□□ 1.43
APOE-204ENST00000446996 ITGB1P05556 798 aa23.96■■□□□ 1.43
APOE-204ENST00000446996 OSTNP61366 133 aa23.96■■□□□ 1.43
APOE-204ENST00000446996 TUSC3Q13454 348 aa23.96■■□□□ 1.43
APOE-204ENST00000446996 PNOCQ13519 176 aa23.96■■□□□ 1.43
APOE-204ENST00000446996 ADGRE1Q14246 886 aa23.96■■□□□ 1.43
APOE-204ENST00000446996 KNOP1Q1ED39 458 aaKnown RBP23.96■■□□□ 1.43
APOE-204ENST00000446996 SLC10A6Q3KNW5 377 aa23.96■■□□□ 1.43
APOE-204ENST00000446996 KIAA0895Q8NCT3 520 aa23.96■■□□□ 1.43
APOE-204ENST00000446996 GDPD5Q8WTR4 605 aa23.96■■□□□ 1.43
APOE-204ENST00000446996 PPP1R10Q96QC0 940 aaKnown RBP23.96■■□□□ 1.43
APOE-204ENST00000446996 RPF1Q9H9Y2 349 aaKnown RBP23.96■■□□□ 1.43
APOE-204ENST00000446996 FAN1Q9Y2M0 1017 aa23.96■■□□□ 1.43
APOE-204ENST00000446996 PDCD11Q14690 1871 aaKnown RBP23.96■■□□□ 1.43
APOE-204ENST00000446996 SMIM28A0A1B0GU29 152 aa23.95■■□□□ 1.42
APOE-204ENST00000446996 TTC26A0AVF1 554 aa23.95■■□□□ 1.42
APOE-204ENST00000446996 KRT17Q04695 432 aa23.95■■□□□ 1.42
APOE-204ENST00000446996 HSP90AA2PQ14568 343 aaPredicted RBP23.95■■□□□ 1.42
APOE-204ENST00000446996 NAB2Q15742 525 aa23.95■■□□□ 1.42
APOE-204ENST00000446996 C12orf56Q8IXR9 622 aa23.95■■□□□ 1.42
APOE-204ENST00000446996 TMEM174Q8WUU8 243 aa23.95■■□□□ 1.42
APOE-204ENST00000446996 LMBRD1Q9NUN5 540 aa23.95■■□□□ 1.42
APOE-204ENST00000446996 SLC38A7Q9NVC3 462 aa23.95■■□□□ 1.42
APOE-204ENST00000446996 DNAJB4Q9UDY4 337 aa23.95■■□□□ 1.42
APOE-204ENST00000446996 PUF60Q9UHX1 559 aaKnown RBP23.95■■□□□ 1.42
APOE-204ENST00000446996 PCDHA5Q9Y5H7 936 aa23.95■■□□□ 1.42
APOE-204ENST00000446996 PLXNA4Q9HCM2 1894 aa23.94■■□□□ 1.42
APOE-204ENST00000446996 TISP43B9A030 160 aa23.94■■□□□ 1.42
APOE-204ENST00000446996 NRP1O14786 923 aa23.94■■□□□ 1.42
APOE-204ENST00000446996 TGFB1I1O43294 461 aa23.94■■□□□ 1.42
APOE-204ENST00000446996 FOSL2P15408 326 aa23.94■■□□□ 1.42
APOE-204ENST00000446996 SLC11A1P49279 550 aa23.94■■□□□ 1.42
APOE-204ENST00000446996 ARMCX5Q6P1M9 558 aa23.94■■□□□ 1.42
APOE-204ENST00000446996 HS2ST1Q7LGA3 356 aa23.94■■□□□ 1.42
APOE-204ENST00000446996 GOLGA5Q8TBA6 731 aa23.94■■□□□ 1.42
APOE-204ENST00000446996 SMARCE1Q969G3 411 aa23.94■■□□□ 1.42
APOE-204ENST00000446996 MRPL38Q96DV4 380 aaKnown RBP23.94■■□□□ 1.42
APOE-204ENST00000446996 TMEM169Q96HH4 297 aa23.94■■□□□ 1.42
APOE-204ENST00000446996 IGSF21Q96ID5 467 aa23.94■■□□□ 1.42
APOE-204ENST00000446996 ASB7Q9H672 318 aa23.94■■□□□ 1.42
APOE-204ENST00000446996 MTCH2Q9Y6C9 303 aa23.94■■□□□ 1.42
APOE-204ENST00000446996 GRM6O15303 877 aa23.93■■□□□ 1.42
APOE-204ENST00000446996 B4GALT3O60512 393 aa23.93■■□□□ 1.42
APOE-204ENST00000446996 TNFSF9P41273 254 aa23.93■■□□□ 1.42
APOE-204ENST00000446996 SEZ6Q53EL9 994 aa23.93■■□□□ 1.42
APOE-204ENST00000446996 COBLL1Q53SF7 1204 aa23.93■■□□□ 1.42
APOE-204ENST00000446996 PDE12Q6L8Q7 609 aaKnown RBP23.93■■□□□ 1.42
APOE-204ENST00000446996 GUF1Q8N442 669 aaKnown RBP23.93■■□□□ 1.42
APOE-204ENST00000446996 UROC1Q96N76 676 aa23.93■■□□□ 1.42
APOE-204ENST00000446996 COLEC11Q9BWP8 271 aa23.93■■□□□ 1.42
APOE-204ENST00000446996 IKZF4Q9H2S9 585 aa23.93■■□□□ 1.42
APOE-204ENST00000446996 KIAA1586Q9HCI6 787 aa23.93■■□□□ 1.42
APOE-204ENST00000446996 A0A0C4DFX4 3053 aa23.92■■□□□ 1.42
APOE-204ENST00000446996 PDXKO00764 312 aa23.92■■□□□ 1.42
APOE-204ENST00000446996 MEFVO15553 781 aaPredicted RBP23.92■■□□□ 1.42
APOE-204ENST00000446996 EXTL3O43909 919 aa23.92■■□□□ 1.42
APOE-204ENST00000446996 CXCL8P10145 99 aa23.92■■□□□ 1.42
APOE-204ENST00000446996 PPP2R3AQ06190 1150 aa23.92■■□□□ 1.42
APOE-204ENST00000446996 ENOX2Q16206 610 aaKnown RBP23.92■■□□□ 1.42
APOE-204ENST00000446996 CRELD2Q6UXH1 353 aaPredicted RBP23.92■■□□□ 1.42
APOE-204ENST00000446996 NELFCDQ8IXH7 590 aa23.92■■□□□ 1.42
APOE-204ENST00000446996 POF1BQ8WVV4 589 aa23.92■■□□□ 1.42
APOE-204ENST00000446996 CXCL16Q9H2A7 254 aa23.92■■□□□ 1.42
APOE-204ENST00000446996 ALG13Q9NP73 1137 aaKnown RBP23.92■■□□□ 1.42
APOE-204ENST00000446996 AGPAT3Q9NRZ7 376 aa23.92■■□□□ 1.42
APOE-204ENST00000446996 DERAQ9Y315 318 aa23.92■■□□□ 1.42
APOE-204ENST00000446996 ANK1P16157 1881 aa23.92■■□□□ 1.42
APOE-204ENST00000446996 XPOTO43592 962 aaKnown RBP23.91■■□□□ 1.42
APOE-204ENST00000446996 CYP3A5P20815 502 aa23.91■■□□□ 1.42
APOE-204ENST00000446996 IGFBP4P22692 258 aa23.91■■□□□ 1.42
APOE-204ENST00000446996 OR1G1P47890 313 aa23.91■■□□□ 1.42
APOE-204ENST00000446996 MYBPC2Q14324 1141 aa23.91■■□□□ 1.42
APOE-204ENST00000446996 ZNF658Q5TYW1 1059 aaPredicted RBP23.91■■□□□ 1.42
APOE-204ENST00000446996 DDX53Q86TM3 631 aaKnown RBP23.91■■□□□ 1.42
APOE-204ENST00000446996 NT5DC4Q86YG4 428 aa23.91■■□□□ 1.42
APOE-204ENST00000446996 GPD1LQ8N335 351 aa23.91■■□□□ 1.42
APOE-204ENST00000446996 DDX27Q96GQ7 796 aaKnown RBP23.91■■□□□ 1.42
APOE-204ENST00000446996 FBXL18Q96ME1 805 aa23.91■■□□□ 1.42
APOE-204ENST00000446996 ZMAT2Q96NC0 199 aaKnown RBP23.91■■□□□ 1.42
APOE-204ENST00000446996 CBWD1Q9BRT8 395 aa23.91■■□□□ 1.42
APOE-204ENST00000446996 KCTD10Q9H3F6 313 aa23.91■■□□□ 1.42
APOE-204ENST00000446996 TRANK1O15050 2925 aa23.91■■□□□ 1.42
APOE-204ENST00000446996 PRRC2BQ5JSZ5 2229 aaKnown RBP23.91■■□□□ 1.42
APOE-204ENST00000446996 EYSQ5T1H1 3165 aa23.91■■□□□ 1.42
APOE-204ENST00000446996 LACTBL1A8MY62 500 aa23.9■■□□□ 1.42
APOE-204ENST00000446996 NT5C1B-RDH14C9J2C7 533 aa23.9■■□□□ 1.42
APOE-204ENST00000446996 IL18RAPO95256 599 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms