RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 KRT27Q7Z3Y8 459 aa5.44□□□□□ -1.54
SCN11A-202ENST00000444237 ZNF589Q86UQ0 364 aaPredicted RBP5.44□□□□□ -1.54
SCN11A-202ENST00000444237 HEATR4Q86WZ0 1026 aa5.44□□□□□ -1.54
SCN11A-202ENST00000444237 JAMLQ86YT9 394 aa5.44□□□□□ -1.54
SCN11A-202ENST00000444237 CLVS1Q8IUQ0 354 aaPredicted RBP5.44□□□□□ -1.54
SCN11A-202ENST00000444237 PROM2Q8N271 834 aa5.44□□□□□ -1.54
SCN11A-202ENST00000444237 ZCCHC7Q8N3Z6 543 aaKnown RBP5.44□□□□□ -1.54
SCN11A-202ENST00000444237 RASSF5Q8WWW0 418 aa5.44□□□□□ -1.54
SCN11A-202ENST00000444237 EAF2Q96CJ1 260 aaPredicted RBP5.44□□□□□ -1.54
SCN11A-202ENST00000444237 RMND5BQ96G75 393 aaPredicted RBP5.44□□□□□ -1.54
SCN11A-202ENST00000444237 HACD3Q9P035 362 aa5.44□□□□□ -1.54
SCN11A-202ENST00000444237 TLK1Q9UKI8 766 aa5.44□□□□□ -1.54
SCN11A-202ENST00000444237 STX8Q9UNK0 236 aa5.44□□□□□ -1.54
SCN11A-202ENST00000444237 EXOC7Q9UPT5 735 aa5.44□□□□□ -1.54
SCN11A-202ENST00000444237 CLEC11AQ9Y240 323 aa5.44□□□□□ -1.54
SCN11A-202ENST00000444237 TELO2Q9Y4R8 837 aa5.44□□□□□ -1.54
SCN11A-202ENST00000444237 RFX7Q2KHR2 1363 aa5.44□□□□□ -1.54
SCN11A-202ENST00000444237 MAST3O60307 1309 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 C1orf232A0A0U1RR37 186 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 NOTOA8MTQ0 251 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 TXKP42681 527 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 ALDH18A1P54886 795 aaKnown RBP5.43□□□□□ -1.54
SCN11A-202ENST00000444237 OLR1P78380 273 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 SLC18A3Q16572 532 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 CASC4Q6P4E1 433 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 DCUN1D2Q6PH85 259 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 LDHAL6AQ6ZMR3 332 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 DDX42Q86XP3 938 aaKnown RBP eCLIP5.43□□□□□ -1.54
SCN11A-202ENST00000444237 ZNF654Q8IZM8 581 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 SCFD1Q8WVM8 642 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 SEPT1Q8WYJ6 367 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 RMDN1Q96DB5 314 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 CCDC90BQ9GZT6 254 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 TRNAU1APQ9NX07 287 aaKnown RBP5.43□□□□□ -1.54
SCN11A-202ENST00000444237 COPG2Q9UBF2 871 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 HEY2Q9UBP5 337 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 TAGLN3Q9UI15 199 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 MYRFQ9Y2G1 1151 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 UMODL1Q5DID0 1318 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 CPSF1Q10570 1443 aaKnown RBP5.43□□□□□ -1.54
SCN11A-202ENST00000444237 A0A087WXM4 84 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 VWA5AO00534 786 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 PRLP01236 227 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 OR52Z1P0C646 297 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 IFNAR1P17181 557 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 ATF7P17544 494 aaPredicted RBP5.43□□□□□ -1.54
SCN11A-202ENST00000444237 PRCPP42785 496 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 USP11P51784 963 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 COPAP53621 1224 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 VCPP55072 806 aaKnown RBP5.43□□□□□ -1.54
SCN11A-202ENST00000444237 SNX16P57768 344 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 DAB2P98082 770 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 GRM1Q13255 1194 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 MAPRE2Q15555 327 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 AKAP4Q5JQC9 854 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 SETD3Q86TU7 594 aaPredicted RBP5.43□□□□□ -1.54
SCN11A-202ENST00000444237 PRPF39Q86UA1 669 aaKnown RBP5.43□□□□□ -1.54
SCN11A-202ENST00000444237 OR6Y1Q8NGX8 325 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 SLC10A4Q96EP9 437 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 MAGED4Q96JG8 741 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 OLFM1Q99784 485 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 PSMC3IPQ9P2W1 217 aaPredicted RBP5.43□□□□□ -1.54
SCN11A-202ENST00000444237 PHF24Q9UPV7 400 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 GDAQ9Y2T3 454 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 COQ6Q9Y2Z9 468 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 COPG1Q9Y678 874 aaKnown RBP5.43□□□□□ -1.54
SCN11A-202ENST00000444237 PFASO15067 1338 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 GRIN2DO15399 1336 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 TMEM247A6NEH6 219 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 SGK1O00141 431 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 CES2O00748 559 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 TRMUO75648 421 aaKnown RBP5.43□□□□□ -1.54
SCN11A-202ENST00000444237 BAIAP3O94812 1187 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 SEC24DO94855 1032 aaPredicted RBP5.43□□□□□ -1.54
SCN11A-202ENST00000444237 ATP5BP06576 529 aaKnown RBP5.43□□□□□ -1.54
SCN11A-202ENST00000444237 LINGO3P0C6S8 592 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 TRIM49P0CI25 452 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 TRIM49CP0CI26 452 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 PLCG2P16885 1265 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 PTGS2P35354 604 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 IL12RB1P42701 662 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 ERFP50548 548 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 NLRP11P59045 1033 aaKnown RBP5.43□□□□□ -1.54
SCN11A-202ENST00000444237 ITGADQ13349 1161 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 INPP5AQ14642 412 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 MTFR1Q15390 333 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 FAM83BQ5T0W9 1011 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 NET1Q7Z628 596 aaPredicted RBP5.43□□□□□ -1.54
SCN11A-202ENST00000444237 BLIDQ8IZY5 108 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 ZNF786Q8N393 782 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 FANCBQ8NB91 859 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 ZNF570Q96NI8 536 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 QKIQ96PU8 341 aaKnown RBP eCLIP5.43□□□□□ -1.54
SCN11A-202ENST00000444237 TMEM237Q96Q45 408 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 EYA1Q99502 592 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 DCUN1D5Q9BTE7 237 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 TBC1D10AQ9BXI6 508 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 SPON1Q9HCB6 807 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 VAT1LQ9HCJ6 419 aa5.43□□□□□ -1.54
SCN11A-202ENST00000444237 PCDHB6Q9Y5E3 794 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms