RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 RFX1P22670 979 aa10.28□□□□□ -0.76
SMPD4P1-203ENST00000443839 HNRNPH3P31942 346 aaKnown RBP10.28□□□□□ -0.76
SMPD4P1-203ENST00000443839 MRPS6P82932 125 aaKnown RBP10.28□□□□□ -0.76
SMPD4P1-203ENST00000443839 ARID5AQ03989 594 aa10.28□□□□□ -0.76
SMPD4P1-203ENST00000443839 IQCEQ6IPM2 695 aa10.28□□□□□ -0.76
SMPD4P1-203ENST00000443839 DPY19L2P1Q6NXN4 242 aa10.28□□□□□ -0.76
SMPD4P1-203ENST00000443839 RAD9BQ6WBX8 426 aa10.28□□□□□ -0.76
SMPD4P1-203ENST00000443839 TOGARAM2Q6ZUX3 1019 aa10.28□□□□□ -0.76
SMPD4P1-203ENST00000443839 CCAR2Q8N163 923 aaKnown RBP10.28□□□□□ -0.76
SMPD4P1-203ENST00000443839 TAS1R2Q8TE23 839 aa10.28□□□□□ -0.76
SMPD4P1-203ENST00000443839 TMEM40Q8WWA1 233 aa10.28□□□□□ -0.76
SMPD4P1-203ENST00000443839 SYN2Q92777 582 aaPredicted RBP10.28□□□□□ -0.76
SMPD4P1-203ENST00000443839 CGRRF1Q99675 332 aa10.28□□□□□ -0.76
SMPD4P1-203ENST00000443839 TSEN34Q9BSV6 310 aaKnown RBP10.28□□□□□ -0.76
SMPD4P1-203ENST00000443839 DESI2Q9BSY9 194 aa10.28□□□□□ -0.76
SMPD4P1-203ENST00000443839 CELF4Q9BZC1 486 aaKnown RBP10.28□□□□□ -0.76
SMPD4P1-203ENST00000443839 RPF1Q9H9Y2 349 aaKnown RBP10.28□□□□□ -0.76
SMPD4P1-203ENST00000443839 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.28□□□□□ -0.764e-7■■■■■ 52.5
SMPD4P1-203ENST00000443839 RAB20Q9NX57 234 aa10.28□□□□□ -0.76
SMPD4P1-203ENST00000443839 GRIN2DO15399 1336 aa10.28□□□□□ -0.76
SMPD4P1-203ENST00000443839 USP27XA6NNY8 438 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 KBTBD13C9JR72 458 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 CCP110O43303 1012 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 ZSCAN12O43309 604 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 CLSTN1O94985 981 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 IPO7O95373 1038 aaKnown RBP10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 CLTAP09496 248 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 CTSHP09668 335 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 CCDC175P0C221 793 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 STAG3L1P0CL83 205 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 CXCL8P10145 99 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 CDK17Q00537 523 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 SURF1Q15526 300 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 ENOX2Q16206 610 aaKnown RBP10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 KYAT1Q16773 422 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 DCAF4L1Q3SXM0 396 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 TDRD12Q587J7 1177 aaKnown RBP10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 NOTUMQ6P988 496 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 WDR49Q8IV35 697 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 LMO3Q8TAP4 145 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 ZNF516Q92618 1163 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 FAM84AQ96KN4 292 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 UNC93B1Q9H1C4 597 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 DEF6Q9H4E7 631 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 SPTLC3Q9NUV7 552 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 DNAJC12Q9UKB3 198 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 MYO6Q9UM54 1294 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 PIN4Q9Y237 131 aaKnown RBP10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 COQ4Q9Y3A0 265 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 PTPRJQ12913 1337 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 PHACTR2O75167 634 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 LRRN2O75325 713 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 IL18RAPO95256 599 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 HOXA11P31270 313 aaPredicted RBP10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 PIK3CAP42336 1068 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 AP3M2P53677 418 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 ASIC2Q16515 512 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 ZACNQ401N2 412 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 TDRD10Q5VZ19 366 aaKnown RBP10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 PHLDB3Q6NSJ2 640 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 SLC27A1Q6PCB7 646 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 TMEM192Q8IY95 271 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 PPM1KQ8N3J5 372 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 SEMA4DQ92854 862 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 CCDC42Q96M95 316 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 TRIM6Q9C030 488 aaPredicted RBP10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 NHEJ1Q9H9Q4 299 aaPredicted RBP10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 UBE2TQ9NPD8 197 aaPredicted RBP10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 STARD7Q9NQZ5 370 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 TRMT13Q9NUP7 481 aaKnown RBP10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 AJAP1Q9UKB5 411 aaPredicted RBP10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 PPP2R2CQ9Y2T4 447 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 DAAM1Q9Y4D1 1078 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 TRPV2Q9Y5S1 764 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 CDY2AQ9Y6F7 541 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 FRMPD3Q5JV73 1810 aa10.27□□□□□ -0.77
SMPD4P1-203ENST00000443839 UQCRHLA0A096LP55 91 aa10.26□□□□□ -0.77
SMPD4P1-203ENST00000443839 A0A1W2PQ45 241 aaPredicted RBP10.26□□□□□ -0.77
SMPD4P1-203ENST00000443839 A0A1W2PQY0 241 aa10.26□□□□□ -0.77
SMPD4P1-203ENST00000443839 F8VZ95 297 aa10.26□□□□□ -0.77
SMPD4P1-203ENST00000443839 NDUFA10O95299 355 aa10.26□□□□□ -0.77
SMPD4P1-203ENST00000443839 NPTXRO95502 500 aa10.26□□□□□ -0.77
SMPD4P1-203ENST00000443839 UQCRHP07919 91 aa10.26□□□□□ -0.77
SMPD4P1-203ENST00000443839 AXLP30530 894 aa10.26□□□□□ -0.77
SMPD4P1-203ENST00000443839 CYLC1P35663 651 aaPredicted RBP10.26□□□□□ -0.77
SMPD4P1-203ENST00000443839 THPOP40225 353 aa10.26□□□□□ -0.77
SMPD4P1-203ENST00000443839 JAM2P57087 298 aa10.26□□□□□ -0.77
SMPD4P1-203ENST00000443839 TFAMQ00059 246 aaKnown RBP10.26□□□□□ -0.77
SMPD4P1-203ENST00000443839 PTPN11Q06124 597 aaPredicted RBP10.26□□□□□ -0.77
SMPD4P1-203ENST00000443839 ARHGAP44Q17R89 818 aa10.26□□□□□ -0.77
SMPD4P1-203ENST00000443839 DUOXA2Q1HG44 320 aa10.26□□□□□ -0.77
SMPD4P1-203ENST00000443839 C15orf39Q6ZRI6 1047 aa10.26□□□□□ -0.77
SMPD4P1-203ENST00000443839 CCDC170Q8IYT3 715 aa10.26□□□□□ -0.77
SMPD4P1-203ENST00000443839 OR5B17Q8NGF7 314 aa10.26□□□□□ -0.77
SMPD4P1-203ENST00000443839 WNT8BQ93098 351 aa10.26□□□□□ -0.77
SMPD4P1-203ENST00000443839 PPP1R13BQ96KQ4 1090 aa10.26□□□□□ -0.77
SMPD4P1-203ENST00000443839 NT5C1BQ96P26 610 aa10.26□□□□□ -0.77
SMPD4P1-203ENST00000443839 ACAP3Q96P50 834 aa10.26□□□□□ -0.77
SMPD4P1-203ENST00000443839 STK33Q9BYT3 514 aa10.26□□□□□ -0.77
SMPD4P1-203ENST00000443839 MTMR12Q9C0I1 747 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms