RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 BHMG1C9JSJ3 638 aaPredicted RBP20.27■□□□□ 0.84
PAXBP1-204ENST00000443785 RALAP11233 206 aa20.27■□□□□ 0.84
PAXBP1-204ENST00000443785 TNNI1P19237 187 aa20.27■□□□□ 0.84
PAXBP1-204ENST00000443785 RPS6P62753 249 aaKnown RBP20.27■□□□□ 0.84
PAXBP1-204ENST00000443785 BTNL9Q6UXG8 535 aa20.27■□□□□ 0.84
PAXBP1-204ENST00000443785 TMEM130Q8N3G9 435 aa20.27■□□□□ 0.84
PAXBP1-204ENST00000443785 AAASQ9NRG9 546 aa20.27■□□□□ 0.84
PAXBP1-204ENST00000443785 SERPINA10Q9UK55 444 aa20.27■□□□□ 0.84
PAXBP1-204ENST00000443785 DHX15O43143 795 aaKnown RBP20.26■□□□□ 0.83
PAXBP1-204ENST00000443785 NPTX2P47972 431 aa20.26■□□□□ 0.83
PAXBP1-204ENST00000443785 ADCY2Q08462 1091 aa20.26■□□□□ 0.83
PAXBP1-204ENST00000443785 EMC10Q5UCC4 262 aa20.26■□□□□ 0.83
PAXBP1-204ENST00000443785 ZBTB45Q96K62 511 aaPredicted RBP20.26■□□□□ 0.83
PAXBP1-204ENST00000443785 CEP170P1Q96L14 293 aa20.26■□□□□ 0.83
PAXBP1-204ENST00000443785 SEL1LQ9UBV2 794 aa20.26■□□□□ 0.83
PAXBP1-204ENST00000443785 PASKQ96RG2 1323 aa20.26■□□□□ 0.83
PAXBP1-204ENST00000443785 POC1B-GALNT4F8VUJ3 575 aa20.26■□□□□ 0.83
PAXBP1-204ENST00000443785 ATF7P17544 494 aaPredicted RBP20.26■□□□□ 0.83
PAXBP1-204ENST00000443785 MMP13P45452 471 aa20.26■□□□□ 0.83
PAXBP1-204ENST00000443785 KMT5AQ9NQR1 393 aa20.26■□□□□ 0.83
PAXBP1-204ENST00000443785 EIF3BP55884 814 aaKnown RBP20.26■□□□□ 0.83
PAXBP1-204ENST00000443785 SIX1Q15475 284 aaPredicted RBP20.26■□□□□ 0.83
PAXBP1-204ENST00000443785 CNGA2Q16280 664 aa20.26■□□□□ 0.83
PAXBP1-204ENST00000443785 SLC15A2Q16348 729 aa20.26■□□□□ 0.83
PAXBP1-204ENST00000443785 SPATS2Q86XZ4 545 aaKnown RBP20.26■□□□□ 0.83
PAXBP1-204ENST00000443785 ANKS4BQ8N8V4 417 aa20.26■□□□□ 0.83
PAXBP1-204ENST00000443785 NT5C1BQ96P26 610 aa20.26■□□□□ 0.83
PAXBP1-204ENST00000443785 ANKFY1Q9P2R3 1169 aa20.26■□□□□ 0.83
PAXBP1-204ENST00000443785 CTDP1Q9Y5B0 961 aaPredicted RBP20.26■□□□□ 0.83
PAXBP1-204ENST00000443785 ASTN2O75129 1339 aaPredicted RBP20.26■□□□□ 0.83
PAXBP1-204ENST00000443785 CTNNA2P26232 953 aa20.25■□□□□ 0.83
PAXBP1-204ENST00000443785 MFAP3P55082 362 aa20.25■□□□□ 0.83
PAXBP1-204ENST00000443785 ZBTB41Q5SVQ8 909 aa20.25■□□□□ 0.83
PAXBP1-204ENST00000443785 FAM71AQ8IYT1 594 aa20.25■□□□□ 0.83
PAXBP1-204ENST00000443785 CCDC63Q8NA47 563 aa20.25■□□□□ 0.83
PAXBP1-204ENST00000443785 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.25■□□□□ 0.83
PAXBP1-204ENST00000443785 RAB20Q9NX57 234 aa20.25■□□□□ 0.83
PAXBP1-204ENST00000443785 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.25■□□□□ 0.83
PAXBP1-204ENST00000443785 PCDHA3Q9Y5H8 950 aa20.25■□□□□ 0.83
PAXBP1-204ENST00000443785 ADGRA3Q8IWK6 1321 aa20.25■□□□□ 0.83
PAXBP1-204ENST00000443785 EGFRP00533 1210 aa20.25■□□□□ 0.83
PAXBP1-204ENST00000443785 BRAFP15056 766 aa20.25■□□□□ 0.83
PAXBP1-204ENST00000443785 TMED2Q15363 201 aa20.25■□□□□ 0.83
PAXBP1-204ENST00000443785 LARGE2Q8N3Y3 721 aa20.25■□□□□ 0.83
PAXBP1-204ENST00000443785 OGFOD1Q8N543 542 aa20.25■□□□□ 0.83
PAXBP1-204ENST00000443785 HELQQ8TDG4 1101 aa20.25■□□□□ 0.83
PAXBP1-204ENST00000443785 PARD3BQ8TEW8 1205 aa20.25■□□□□ 0.83
PAXBP1-204ENST00000443785 RMDN3Q96TC7 470 aa20.25■□□□□ 0.83
PAXBP1-204ENST00000443785 C12orf65Q9H3J6 166 aaKnown RBP20.25■□□□□ 0.83
PAXBP1-204ENST00000443785 SAE1Q9UBE0 346 aaPredicted RBP20.25■□□□□ 0.83
PAXBP1-204ENST00000443785 GABBR1Q9UBS5 961 aa20.25■□□□□ 0.83
PAXBP1-204ENST00000443785 SPDYE2BA6NHP3 402 aa20.24■□□□□ 0.83
PAXBP1-204ENST00000443785 IFNB1P01574 187 aa20.24■□□□□ 0.83
PAXBP1-204ENST00000443785 SPDYE6P0CI01 402 aa20.24■□□□□ 0.83
PAXBP1-204ENST00000443785 HOXA7P31268 230 aaPredicted RBP20.24■□□□□ 0.83
PAXBP1-204ENST00000443785 CAP2P40123 477 aa20.24■□□□□ 0.83
PAXBP1-204ENST00000443785 CCDC91Q7Z6B0 441 aa20.24■□□□□ 0.83
PAXBP1-204ENST00000443785 N4BP2L2Q92802 583 aaPredicted RBP20.24■□□□□ 0.83
PAXBP1-204ENST00000443785 SGSM3Q96HU1 749 aa20.24■□□□□ 0.83
PAXBP1-204ENST00000443785 RANBP17Q9H2T7 1088 aaKnown RBP20.24■□□□□ 0.83
PAXBP1-204ENST00000443785 TMEM206Q9H813 350 aa20.24■□□□□ 0.83
PAXBP1-204ENST00000443785 TBX20Q9UMR3 447 aa20.24■□□□□ 0.83
PAXBP1-204ENST00000443785 RIPK3Q9Y572 518 aa20.24■□□□□ 0.83
PAXBP1-204ENST00000443785 MIF4GDA9UHW6 222 aaKnown RBP20.24■□□□□ 0.83
PAXBP1-204ENST00000443785 RNASELQ05823 741 aaKnown RBP20.24■□□□□ 0.83
PAXBP1-204ENST00000443785 C6orf118Q5T5N4 469 aa20.24■□□□□ 0.83
PAXBP1-204ENST00000443785 KRT39Q6A163 491 aa20.24■□□□□ 0.83
PAXBP1-204ENST00000443785 ANO5Q75V66 913 aa20.24■□□□□ 0.83
PAXBP1-204ENST00000443785 YTHDF3Q7Z739 585 aaKnown RBP20.24■□□□□ 0.83
PAXBP1-204ENST00000443785 GIMAP7Q8NHV1 300 aa20.24■□□□□ 0.83
PAXBP1-204ENST00000443785 TMEM143Q96AN5 459 aa20.24■□□□□ 0.83
PAXBP1-204ENST00000443785 STAMBPL1Q96FJ0 436 aa20.24■□□□□ 0.83
PAXBP1-204ENST00000443785 AGO4Q9HCK5 861 aaKnown RBP20.24■□□□□ 0.83
PAXBP1-204ENST00000443785 CHUKO15111 745 aa20.23■□□□□ 0.83
PAXBP1-204ENST00000443785 TP73O15350 636 aa20.23■□□□□ 0.83
PAXBP1-204ENST00000443785 UPP2O95045 317 aa20.23■□□□□ 0.83
PAXBP1-204ENST00000443785 TAS2R40P59535 323 aa20.23■□□□□ 0.83
PAXBP1-204ENST00000443785 DYNLT1P63172 113 aa20.23■□□□□ 0.83
PAXBP1-204ENST00000443785 SWSAP1Q6NVH7 229 aa20.23■□□□□ 0.83
PAXBP1-204ENST00000443785 SLC39A4Q6P5W5 647 aa20.23■□□□□ 0.83
PAXBP1-204ENST00000443785 TRPM8Q7Z2W7 1104 aa20.23■□□□□ 0.83
PAXBP1-204ENST00000443785 TAOK3Q9H2K8 898 aa20.23■□□□□ 0.83
PAXBP1-204ENST00000443785 CNOT10Q9H9A5 744 aaKnown RBP20.23■□□□□ 0.83
PAXBP1-204ENST00000443785 ANAPC5Q9UJX4 755 aa20.23■□□□□ 0.83
PAXBP1-204ENST00000443785 WDR91A4D1P6 747 aa20.23■□□□□ 0.83
PAXBP1-204ENST00000443785 NUDT17P0C025 328 aa20.23■□□□□ 0.83
PAXBP1-204ENST00000443785 ELF3P78545 371 aaPredicted RBP20.23■□□□□ 0.83
PAXBP1-204ENST00000443785 MTERF2Q49AM1 385 aa20.23■□□□□ 0.83
PAXBP1-204ENST00000443785 UMODL1Q5DID0 1318 aa20.23■□□□□ 0.83
PAXBP1-204ENST00000443785 C4orf33Q8N1A6 199 aa20.23■□□□□ 0.83
PAXBP1-204ENST00000443785 SLC17A8Q8NDX2 589 aa20.23■□□□□ 0.83
PAXBP1-204ENST00000443785 KCNV2Q8TDN2 545 aa20.23■□□□□ 0.83
PAXBP1-204ENST00000443785 ZNF536O15090 1300 aa20.23■□□□□ 0.83
PAXBP1-204ENST00000443785 SKAP2O75563 359 aaPredicted RBP20.23■□□□□ 0.83
PAXBP1-204ENST00000443785 PRKG1Q13976 671 aa20.23■□□□□ 0.83
PAXBP1-204ENST00000443785 FASTKD3Q14CZ7 662 aaKnown RBP20.23■□□□□ 0.83
PAXBP1-204ENST00000443785 C11orf63Q6NUN7 778 aa20.23■□□□□ 0.83
PAXBP1-204ENST00000443785 TMEM270Q6UE05 265 aa20.23■□□□□ 0.83
PAXBP1-204ENST00000443785 FBXL13Q8NEE6 735 aa20.23■□□□□ 0.83
PAXBP1-204ENST00000443785 AKT1S1Q96B36 256 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms