RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 KLC1Q07866 573 aa21.66■■□□□ 1.06
SHOX2-203ENST00000441443 IKQ13123 557 aaPredicted RBP21.66■■□□□ 1.06
SHOX2-203ENST00000441443 SAMD1Q6SPF0 538 aaPredicted RBP21.66■■□□□ 1.06
SHOX2-203ENST00000441443 UCMAQ8WVF2 138 aa21.66■■□□□ 1.06
SHOX2-203ENST00000441443 TEKT1Q969V4 418 aa21.66■■□□□ 1.06
SHOX2-203ENST00000441443 SLC7A6OSQ96CW6 309 aaPredicted RBP21.66■■□□□ 1.06
SHOX2-203ENST00000441443 DENND2DQ9H6A0 471 aaPredicted RBP21.66■■□□□ 1.06
SHOX2-203ENST00000441443 T-ENOLP0DO92 83 aa21.65■■□□□ 1.06
SHOX2-203ENST00000441443 SPIRE1Q08AE8 756 aa21.65■■□□□ 1.06
SHOX2-203ENST00000441443 MUM1Q2TAK8 710 aa21.65■■□□□ 1.06
SHOX2-203ENST00000441443 SLC27A3Q5K4L6 730 aa21.65■■□□□ 1.06
SHOX2-203ENST00000441443 RPUSD2Q8IZ73 545 aaKnown RBP21.65■■□□□ 1.06
SHOX2-203ENST00000441443 ACP6Q9NPH0 428 aa21.65■■□□□ 1.06
SHOX2-203ENST00000441443 NINJ2Q9NZG7 142 aa21.65■■□□□ 1.06
SHOX2-203ENST00000441443 HLA-DOAP06340 250 aa21.65■■□□□ 1.06
SHOX2-203ENST00000441443 BMT2Q1RMZ1 405 aa21.65■■□□□ 1.06
SHOX2-203ENST00000441443 C9orf72Q96LT7 481 aa21.65■■□□□ 1.06
SHOX2-203ENST00000441443 PHTF1Q9UMS5 762 aa21.65■■□□□ 1.06
SHOX2-203ENST00000441443 ZMYM2Q9UBW7 1377 aa21.64■■□□□ 1.06
SHOX2-203ENST00000441443 RASA4BC9J798 803 aa21.64■■□□□ 1.06
SHOX2-203ENST00000441443 RASA4O43374 803 aa21.64■■□□□ 1.06
SHOX2-203ENST00000441443 TAL1P17542 331 aaPredicted RBP21.64■■□□□ 1.06
SHOX2-203ENST00000441443 SHMT1P34896 483 aa21.64■■□□□ 1.06
SHOX2-203ENST00000441443 RPS6KA3P51812 740 aa21.64■■□□□ 1.06
SHOX2-203ENST00000441443 IL9RQ01113 521 aa21.64■■□□□ 1.06
SHOX2-203ENST00000441443 TMED2Q15363 201 aa21.64■■□□□ 1.06
SHOX2-203ENST00000441443 SGO2Q562F6 1265 aa21.64■■□□□ 1.06
SHOX2-203ENST00000441443 PPP1R15BQ5SWA1 713 aa21.64■■□□□ 1.06
SHOX2-203ENST00000441443 TMEM63BQ5T3F8 832 aa21.64■■□□□ 1.06
SHOX2-203ENST00000441443 RHBDF2Q6PJF5 856 aa21.64■■□□□ 1.06
SHOX2-203ENST00000441443 NSMFQ6X4W1 530 aa21.64■■□□□ 1.06
SHOX2-203ENST00000441443 C7orf43Q8WVR3 580 aa21.64■■□□□ 1.06
SHOX2-203ENST00000441443 GRAMD1AQ96CP6 724 aa21.64■■□□□ 1.06
SHOX2-203ENST00000441443 UBE2TQ9NPD8 197 aaPredicted RBP21.64■■□□□ 1.06
SHOX2-203ENST00000441443 CHST7Q9NS84 486 aa21.64■■□□□ 1.06
SHOX2-203ENST00000441443 ATF5Q9Y2D1 282 aaPredicted RBP21.64■■□□□ 1.06
SHOX2-203ENST00000441443 MYL7Q01449 175 aa21.64■■□□□ 1.05
SHOX2-203ENST00000441443 DDX60LQ5H9U9 1706 aaKnown RBP21.64■■□□□ 1.05
SHOX2-203ENST00000441443 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.64■■□□□ 1.05
SHOX2-203ENST00000441443 MYCT1Q8N699 235 aa21.64■■□□□ 1.05
SHOX2-203ENST00000441443 WNT8AQ9H1J5 351 aa21.64■■□□□ 1.05
SHOX2-203ENST00000441443 WHRNQ9P202 907 aa21.64■■□□□ 1.05
SHOX2-203ENST00000441443 A0A1W2PRG0 241 aa21.64■■□□□ 1.05
SHOX2-203ENST00000441443 SP100P23497 879 aaPredicted RBP21.64■■□□□ 1.05
SHOX2-203ENST00000441443 GABPAQ06546 454 aa21.64■■□□□ 1.05
SHOX2-203ENST00000441443 ZNF543Q08ER8 600 aa21.64■■□□□ 1.05
SHOX2-203ENST00000441443 KIF22Q14807 665 aa21.64■■□□□ 1.05
SHOX2-203ENST00000441443 TSNAXIP1Q2TAA8 658 aa21.64■■□□□ 1.05
SHOX2-203ENST00000441443 SLC30A10Q6XR72 485 aa21.64■■□□□ 1.05
SHOX2-203ENST00000441443 ANO3Q9BYT9 981 aa21.64■■□□□ 1.05
SHOX2-203ENST00000441443 RGL1Q9NZL6 768 aa21.64■■□□□ 1.05
SHOX2-203ENST00000441443 RPA1P27694 616 aa21.63■■□□□ 1.05
SHOX2-203ENST00000441443 HADHBP55084 474 aaKnown RBP21.63■■□□□ 1.05
SHOX2-203ENST00000441443 ROR2Q01974 943 aaKnown RBP21.63■■□□□ 1.05
SHOX2-203ENST00000441443 MFN1Q8IWA4 741 aa21.63■■□□□ 1.05
SHOX2-203ENST00000441443 CD101Q93033 1021 aa21.63■■□□□ 1.05
SHOX2-203ENST00000441443 USH1CQ9Y6N9 552 aa21.63■■□□□ 1.05
SHOX2-203ENST00000441443 E7ENQ6 273 aa21.63■■□□□ 1.05
SHOX2-203ENST00000441443 MAPK13O15264 365 aa21.63■■□□□ 1.05
SHOX2-203ENST00000441443 GDF11O95390 407 aa21.63■■□□□ 1.05
SHOX2-203ENST00000441443 NPTXRO95502 500 aa21.63■■□□□ 1.05
SHOX2-203ENST00000441443 YARSP54577 528 aaKnown RBP21.63■■□□□ 1.05
SHOX2-203ENST00000441443 PPP1R18Q6NYC8 613 aa21.63■■□□□ 1.05
SHOX2-203ENST00000441443 PPP1R21Q6ZMI0 780 aa21.63■■□□□ 1.05
SHOX2-203ENST00000441443 PCDHB18PQ96TA0 734 aa21.63■■□□□ 1.05
SHOX2-203ENST00000441443 ZBTB5O15062 677 aa21.62■■□□□ 1.05
SHOX2-203ENST00000441443 ONECUT3O60422 494 aaPredicted RBP21.62■■□□□ 1.05
SHOX2-203ENST00000441443 ATP5HO75947 161 aa21.62■■□□□ 1.05
SHOX2-203ENST00000441443 APBA3O96018 575 aa21.62■■□□□ 1.05
SHOX2-203ENST00000441443 CRKP46108 304 aa21.62■■□□□ 1.05
SHOX2-203ENST00000441443 APOBEC3HQ6NTF7 200 aaKnown RBP21.62■■□□□ 1.05
SHOX2-203ENST00000441443 PHC3Q8NDX5 983 aa21.62■■□□□ 1.05
SHOX2-203ENST00000441443 ERMNQ8TAM6 284 aa21.62■■□□□ 1.05
SHOX2-203ENST00000441443 THSD7AQ9UPZ6 1657 aa21.62■■□□□ 1.05
SHOX2-203ENST00000441443 SLFN12Q8IYM2 578 aa21.62■■□□□ 1.05
SHOX2-203ENST00000441443 ADAM33Q9BZ11 813 aa21.62■■□□□ 1.05
SHOX2-203ENST00000441443 LRRC19Q9H756 370 aa21.62■■□□□ 1.05
SHOX2-203ENST00000441443 ASB3Q9Y575 518 aa21.62■■□□□ 1.05
SHOX2-203ENST00000441443 ADGRA3Q8IWK6 1321 aa21.62■■□□□ 1.05
SHOX2-203ENST00000441443 ARFGEF1Q9Y6D6 1849 aa21.62■■□□□ 1.05
SHOX2-203ENST00000441443 CDH16O75309 829 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 SNHG28P0DPA3 235 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 ITIH2P19823 946 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 NOVP48745 357 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 POLE2P56282 527 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 RFWD3Q6PCD5 774 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 APBB1IPQ7Z5R6 666 aaPredicted RBP21.61■■□□□ 1.05
SHOX2-203ENST00000441443 ARHGEF19Q8IW93 802 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 ENDOVQ8N8Q3 282 aaKnown RBP21.61■■□□□ 1.05
SHOX2-203ENST00000441443 SNF8Q96H20 258 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 FAM118BQ9BPY3 351 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 NUP85Q9BW27 656 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 PPP1R12CQ9BZL4 782 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 NMRK1Q9NWW6 199 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 FAM47DPA6NHR8 397 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 ZBTB39O15060 712 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 FAM13AO94988 1023 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 ACADSP16219 412 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 IVDP26440 423 aa21.61■■□□□ 1.05
SHOX2-203ENST00000441443 ADCY8P40145 1251 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms