RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 C1GALT1C1Q96EU7 318 aa6.31□□□□□ -1.4
PFDN4-202ENST00000441080 FAM89AQ96GI7 184 aa6.31□□□□□ -1.4
PFDN4-202ENST00000441080 MRGPRX4Q96LA9 322 aa6.31□□□□□ -1.4
PFDN4-202ENST00000441080 SAMD11Q96NU1 681 aa6.31□□□□□ -1.4
PFDN4-202ENST00000441080 TAAR9Q96RI9 348 aa6.31□□□□□ -1.4
PFDN4-202ENST00000441080 LSM14BQ9BX40 385 aaKnown RBP6.31□□□□□ -1.4
PFDN4-202ENST00000441080 KCNH6Q9H252 994 aa6.31□□□□□ -1.4
PFDN4-202ENST00000441080 KMT5AQ9NQR1 393 aa6.31□□□□□ -1.4
PFDN4-202ENST00000441080 ST6GALNAC2Q9UJ37 374 aa6.31□□□□□ -1.4
PFDN4-202ENST00000441080 CNOT11Q9UKZ1 510 aaKnown RBP6.31□□□□□ -1.4
PFDN4-202ENST00000441080 VSTM5A8MXK1 200 aa6.3□□□□□ -1.4
PFDN4-202ENST00000441080 PRR5-ARHGAP8B1AHC4 643 aa6.3□□□□□ -1.4
PFDN4-202ENST00000441080 ERC2O15083 957 aa6.3□□□□□ -1.4
PFDN4-202ENST00000441080 SLC16A6O15403 523 aa6.3□□□□□ -1.4
PFDN4-202ENST00000441080 FTLP02792 175 aaPredicted RBP6.3□□□□□ -1.4
PFDN4-202ENST00000441080 SNRPA1P09661 255 aaKnown RBP6.3□□□□□ -1.4
PFDN4-202ENST00000441080 ATP5JP18859 108 aa6.3□□□□□ -1.4
PFDN4-202ENST00000441080 ACO1P21399 889 aaKnown RBP6.3□□□□□ -1.4
PFDN4-202ENST00000441080 CTXN1P60606 82 aa6.3□□□□□ -1.4
PFDN4-202ENST00000441080 GFOD2Q3B7J2 385 aa6.3□□□□□ -1.4
PFDN4-202ENST00000441080 ZNF808Q8N4W9 903 aaPredicted RBP6.3□□□□□ -1.4
PFDN4-202ENST00000441080 CAMKK1Q8N5S9 505 aa6.3□□□□□ -1.4
PFDN4-202ENST00000441080 CHST13Q8NET6 341 aa6.3□□□□□ -1.4
PFDN4-202ENST00000441080 MDGA1Q8NFP4 955 aa6.3□□□□□ -1.4
PFDN4-202ENST00000441080 SLC35B2Q8TB61 432 aa6.3□□□□□ -1.4
PFDN4-202ENST00000441080 DMRTA2Q96SC8 542 aa6.3□□□□□ -1.4
PFDN4-202ENST00000441080 MRI1Q9BV20 369 aa6.3□□□□□ -1.4
PFDN4-202ENST00000441080 DEF6Q9H4E7 631 aa6.3□□□□□ -1.4
PFDN4-202ENST00000441080 CD248Q9HCU0 757 aa6.3□□□□□ -1.4
PFDN4-202ENST00000441080 CALCOCO1Q9P1Z2 691 aa6.3□□□□□ -1.4
PFDN4-202ENST00000441080 HECAQ9UBI9 543 aaPredicted RBP6.3□□□□□ -1.4
PFDN4-202ENST00000441080 POLHQ9Y253 713 aa6.3□□□□□ -1.4
PFDN4-202ENST00000441080 TCAF1Q9Y4C2 921 aa6.3□□□□□ -1.4
PFDN4-202ENST00000441080 LRRC14BA6NHZ5 514 aa6.29□□□□□ -1.4
PFDN4-202ENST00000441080 TBKBP1A7MCY6 615 aa6.29□□□□□ -1.4
PFDN4-202ENST00000441080 PJA2O43164 708 aa6.29□□□□□ -1.4
PFDN4-202ENST00000441080 FOXD2O60548 495 aaPredicted RBP6.29□□□□□ -1.4
PFDN4-202ENST00000441080 SELENOPP49908 381 aa6.29□□□□□ -1.4
PFDN4-202ENST00000441080 CLRN1P58418 232 aa6.29□□□□□ -1.4
PFDN4-202ENST00000441080 ZNF280AP59817 542 aaPredicted RBP6.29□□□□□ -1.4
PFDN4-202ENST00000441080 CREMQ03060 361 aa6.29□□□□□ -1.4
PFDN4-202ENST00000441080 TLE1Q04724 770 aa6.29□□□□□ -1.4
PFDN4-202ENST00000441080 ATP2B3Q16720 1220 aa6.29□□□□□ -1.4
PFDN4-202ENST00000441080 KHDC1Q4VXA5 237 aaKnown RBP6.29□□□□□ -1.4
PFDN4-202ENST00000441080 ARHGAP29Q52LW3 1261 aa6.29□□□□□ -1.4
PFDN4-202ENST00000441080 SPTY2D1Q68D10 685 aaPredicted RBP6.29□□□□□ -1.4
PFDN4-202ENST00000441080 OTUD7BQ6GQQ9 843 aa6.29□□□□□ -1.4
PFDN4-202ENST00000441080 MAMDC4Q6UXC1 1216 aa6.29□□□□□ -1.4
PFDN4-202ENST00000441080 Q6ZSN1 163 aa6.29□□□□□ -1.4
PFDN4-202ENST00000441080 DENND1CQ8IV53 801 aa6.29□□□□□ -1.4
PFDN4-202ENST00000441080 GSPT2Q8IYD1 628 aaKnown RBP6.29□□□□□ -1.4
PFDN4-202ENST00000441080 TTC9BQ8N6N2 239 aa6.29□□□□□ -1.4
PFDN4-202ENST00000441080 C3orf20Q8ND61 904 aa6.29□□□□□ -1.4
PFDN4-202ENST00000441080 ATXN2LQ8WWM7 1075 aaKnown RBP6.29□□□□□ -1.4
PFDN4-202ENST00000441080 TFAP2CQ92754 450 aa6.29□□□□□ -1.4
PFDN4-202ENST00000441080 RUNDC1Q96C34 613 aa6.29□□□□□ -1.4
PFDN4-202ENST00000441080 CCDC136Q96JN2 1154 aa6.29□□□□□ -1.4
PFDN4-202ENST00000441080 C8orf48Q96LL4 319 aa6.29□□□□□ -1.4
PFDN4-202ENST00000441080 WWC2-AS2Q96NR7 200 aa6.29□□□□□ -1.4
PFDN4-202ENST00000441080 VRK1Q99986 396 aaPredicted RBP6.29□□□□□ -1.4
PFDN4-202ENST00000441080 SPON1Q9HCB6 807 aa6.29□□□□□ -1.4
PFDN4-202ENST00000441080 MAN1C1Q9NR34 630 aa6.29□□□□□ -1.4
PFDN4-202ENST00000441080 CYP27B1O15528 508 aa6.28□□□□□ -1.4
PFDN4-202ENST00000441080 CTNND1O60716 968 aaKnown RBP6.28□□□□□ -1.4
PFDN4-202ENST00000441080 ALDH2P05091 517 aa6.28□□□□□ -1.4
PFDN4-202ENST00000441080 HK1P19367 917 aa6.28□□□□□ -1.4
PFDN4-202ENST00000441080 MAP2K6P52564 334 aa6.28□□□□□ -1.4
PFDN4-202ENST00000441080 RAP2BP61225 183 aa6.28□□□□□ -1.4
PFDN4-202ENST00000441080 NOGQ13253 232 aa6.28□□□□□ -1.4
PFDN4-202ENST00000441080 BMT2Q1RMZ1 405 aa6.28□□□□□ -1.4
PFDN4-202ENST00000441080 CCDC157Q569K6 752 aa6.28□□□□□ -1.4
PFDN4-202ENST00000441080 EFCAB12Q6NXP0 572 aa6.28□□□□□ -1.4
PFDN4-202ENST00000441080 ZNF585AQ6P3V2 769 aa6.28□□□□□ -1.4
PFDN4-202ENST00000441080 SEM1Q6ZVN7 128 aa6.28□□□□□ -1.4
PFDN4-202ENST00000441080 GPRIN1Q7Z2K8 1008 aa6.28□□□□□ -1.4
PFDN4-202ENST00000441080 PLXDC1Q8IUK5 500 aa6.28□□□□□ -1.4
PFDN4-202ENST00000441080 ZBTB34Q8NCN2 500 aa6.28□□□□□ -1.4
PFDN4-202ENST00000441080 OR52N2Q8NGI0 321 aa6.28□□□□□ -1.4
PFDN4-202ENST00000441080 ZFP28Q8NHY6 868 aa6.28□□□□□ -1.4
PFDN4-202ENST00000441080 C8orf49Q96NF6 230 aa6.28□□□□□ -1.4
PFDN4-202ENST00000441080 ADOQ96SZ5 270 aa6.28□□□□□ -1.4
PFDN4-202ENST00000441080 ACO2Q99798 780 aaKnown RBP6.28□□□□□ -1.4
PFDN4-202ENST00000441080 CPEB1Q9BZB8 566 aaKnown RBP6.28□□□□□ -1.4
PFDN4-202ENST00000441080 C11orf54Q9H0W9 315 aaPredicted RBP6.28□□□□□ -1.4
PFDN4-202ENST00000441080 SMPD4Q9NXE4 827 aa6.28□□□□□ -1.4
PFDN4-202ENST00000441080 CLCA2Q9UQC9 943 aa6.28□□□□□ -1.4
PFDN4-202ENST00000441080 JAG2Q9Y219 1238 aa6.28□□□□□ -1.4
PFDN4-202ENST00000441080 H3BML4 177 aa6.27□□□□□ -1.41
PFDN4-202ENST00000441080 ARIH2O95376 493 aa6.27□□□□□ -1.41
PFDN4-202ENST00000441080 MYBP10242 640 aa6.27□□□□□ -1.41
PFDN4-202ENST00000441080 MALP21145 153 aa6.27□□□□□ -1.41
PFDN4-202ENST00000441080 HIBADHP31937 336 aaKnown RBP6.27□□□□□ -1.41
PFDN4-202ENST00000441080 IL12RB1P42701 662 aa6.27□□□□□ -1.41
PFDN4-202ENST00000441080 HK3P52790 923 aa6.27□□□□□ -1.41
PFDN4-202ENST00000441080 DCAF17Q5H9S7 520 aaPredicted RBP6.27□□□□□ -1.41
PFDN4-202ENST00000441080 ATXN7L2Q5T6C5 722 aaPredicted RBP6.27□□□□□ -1.41
PFDN4-202ENST00000441080 ZNF529Q6P280 563 aa6.27□□□□□ -1.41
PFDN4-202ENST00000441080 DCBLD1Q8N8Z6 715 aa6.27□□□□□ -1.41
PFDN4-202ENST00000441080 RNF169Q8NCN4 708 aa6.27□□□□□ -1.41
PFDN4-202ENST00000441080 PPP1R35Q8TAP8 253 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms