RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 PLEKHA4Q9H4M7 779 aa18.48■□□□□ 0.55
COL16A1-204ENST00000440437 C17orf75Q9HAS0 396 aa18.48■□□□□ 0.55
COL16A1-204ENST00000440437 KMT5AQ9NQR1 393 aa18.48■□□□□ 0.55
COL16A1-204ENST00000440437 LIMD1Q9UGP4 676 aa18.48■□□□□ 0.55
COL16A1-204ENST00000440437 SMC3Q9UQE7 1217 aa18.48■□□□□ 0.55
COL16A1-204ENST00000440437 ZDBF2Q9HCK1 2354 aa18.47■□□□□ 0.55
COL16A1-204ENST00000440437 VWA3AA6NCI4 1184 aa18.47■□□□□ 0.55
COL16A1-204ENST00000440437 TMEM189-UBE2V1I3L0A0 370 aa18.47■□□□□ 0.55
COL16A1-204ENST00000440437 ABLIM1O14639 778 aa18.47■□□□□ 0.55
COL16A1-204ENST00000440437 N4BP1O75113 896 aaKnown RBP18.47■□□□□ 0.55
COL16A1-204ENST00000440437 RPL17P18621 184 aaKnown RBP18.47■□□□□ 0.55
COL16A1-204ENST00000440437 PROZP22891 400 aa18.47■□□□□ 0.55
COL16A1-204ENST00000440437 GRM5P41594 1212 aa18.47■□□□□ 0.55
COL16A1-204ENST00000440437 NHLH1Q02575 133 aa18.47■□□□□ 0.55
COL16A1-204ENST00000440437 GLRA4Q5JXX5 417 aa18.47■□□□□ 0.55
COL16A1-204ENST00000440437 OTOP3Q7RTS5 596 aa18.47■□□□□ 0.55
COL16A1-204ENST00000440437 PALB2Q86YC2 1186 aa18.47■□□□□ 0.55
COL16A1-204ENST00000440437 GLYCTKQ8IVS8 523 aa18.47■□□□□ 0.55
COL16A1-204ENST00000440437 SYT2Q8N9I0 419 aaPredicted RBP18.47■□□□□ 0.55
COL16A1-204ENST00000440437 PRSS33Q8NF86 280 aa18.47■□□□□ 0.55
COL16A1-204ENST00000440437 ZNF707Q96C28 371 aaPredicted RBP18.47■□□□□ 0.55
COL16A1-204ENST00000440437 ACSF2Q96CM8 615 aaPredicted RBP18.47■□□□□ 0.55
COL16A1-204ENST00000440437 MRPL4Q9BYD3 311 aaKnown RBP18.47■□□□□ 0.55
COL16A1-204ENST00000440437 NT5C3AQ9H0P0 336 aa18.47■□□□□ 0.55
COL16A1-204ENST00000440437 DOCK6Q96HP0 2047 aa18.47■□□□□ 0.55
COL16A1-204ENST00000440437 PDGFBP01127 241 aaPredicted RBP18.46■□□□□ 0.55
COL16A1-204ENST00000440437 SPATA31D3P0C874 917 aa18.46■□□□□ 0.55
COL16A1-204ENST00000440437 MYBP10242 640 aa18.46■□□□□ 0.55
COL16A1-204ENST00000440437 SLC12A3P55017 1021 aa18.46■□□□□ 0.55
COL16A1-204ENST00000440437 VCPP55072 806 aaKnown RBP18.46■□□□□ 0.55
COL16A1-204ENST00000440437 ZNF568Q3ZCX4 644 aa18.46■□□□□ 0.55
COL16A1-204ENST00000440437 TMEM119Q4V9L6 283 aa18.46■□□□□ 0.55
COL16A1-204ENST00000440437 XKR4Q5GH76 650 aa18.46■□□□□ 0.55
COL16A1-204ENST00000440437 IER5LQ5T953 404 aa18.46■□□□□ 0.55
COL16A1-204ENST00000440437 FAM171A1Q5VUB5 890 aa18.46■□□□□ 0.55
COL16A1-204ENST00000440437 SPATA31D4Q6ZUB0 917 aa18.46■□□□□ 0.55
COL16A1-204ENST00000440437 APBB1IPQ7Z5R6 666 aaPredicted RBP18.46■□□□□ 0.55
COL16A1-204ENST00000440437 LNX1Q8TBB1 728 aaPredicted RBP18.46■□□□□ 0.55
COL16A1-204ENST00000440437 CLSTN3Q9BQT9 956 aa18.46■□□□□ 0.55
COL16A1-204ENST00000440437 NTPCRQ9BSD7 190 aaKnown RBP18.46■□□□□ 0.55
COL16A1-204ENST00000440437 TTPALQ9BTX7 342 aa18.46■□□□□ 0.55
COL16A1-204ENST00000440437 TARS2Q9BW92 718 aaKnown RBP18.46■□□□□ 0.55
COL16A1-204ENST00000440437 WDR6Q9NNW5 1121 aaKnown RBP18.46■□□□□ 0.55
COL16A1-204ENST00000440437 ZDHHC7Q9NXF8 308 aa18.46■□□□□ 0.55
COL16A1-204ENST00000440437 RBM19Q9Y4C8 960 aaKnown RBP18.46■□□□□ 0.55
COL16A1-204ENST00000440437 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.46■□□□□ 0.55
COL16A1-204ENST00000440437 CLUHO75153 1309 aa18.46■□□□□ 0.55
COL16A1-204ENST00000440437 SFI1A8K8P3 1242 aa18.45■□□□□ 0.54
COL16A1-204ENST00000440437 SLC16A4O15374 487 aa18.45■□□□□ 0.54
COL16A1-204ENST00000440437 IGFBP6P24592 240 aaPredicted RBP18.45■□□□□ 0.54
COL16A1-204ENST00000440437 ELAVL2Q12926 359 aaKnown RBP18.45■□□□□ 0.54
COL16A1-204ENST00000440437 ZRSR1Q15695 479 aaKnown RBP18.45■□□□□ 0.54
COL16A1-204ENST00000440437 PSMD5Q16401 504 aa18.45■□□□□ 0.54
COL16A1-204ENST00000440437 CD300LGQ6UXG3 332 aa18.45■□□□□ 0.54
COL16A1-204ENST00000440437 ALKAL1Q6UXT8 129 aa18.45■□□□□ 0.54
COL16A1-204ENST00000440437 SPIRE2Q8WWL2 714 aa18.45■□□□□ 0.54
COL16A1-204ENST00000440437 SMG7Q92540 1137 aaKnown RBP18.45■□□□□ 0.54
COL16A1-204ENST00000440437 GOLGA2P5Q9HBQ8 144 aa18.45■□□□□ 0.54
COL16A1-204ENST00000440437 FBXW11Q9UKB1 542 aa18.45■□□□□ 0.54
COL16A1-204ENST00000440437 SMIM28A0A1B0GU29 152 aa18.44■□□□□ 0.54
COL16A1-204ENST00000440437 MCF2P10911 925 aa18.44■□□□□ 0.54
COL16A1-204ENST00000440437 PLS3P13797 630 aa18.44■□□□□ 0.54
COL16A1-204ENST00000440437 CLCNKBP51801 687 aa18.44■□□□□ 0.54
COL16A1-204ENST00000440437 SOX4Q06945 474 aaPredicted RBP18.44■□□□□ 0.54
COL16A1-204ENST00000440437 RAD51AP2Q09MP3 1159 aa18.44■□□□□ 0.54
COL16A1-204ENST00000440437 UPP1Q16831 310 aa18.44■□□□□ 0.54
COL16A1-204ENST00000440437 LARP1BQ659C4 914 aaKnown RBP18.44■□□□□ 0.54
COL16A1-204ENST00000440437 MPZL3Q6UWV2 235 aa18.44■□□□□ 0.54
COL16A1-204ENST00000440437 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.44■□□□□ 0.54
COL16A1-204ENST00000440437 CEP57Q86XR8 500 aa18.44■□□□□ 0.54
COL16A1-204ENST00000440437 C3orf58Q8NDZ4 430 aa18.44■□□□□ 0.54
COL16A1-204ENST00000440437 TMEM161BQ8NDZ6 487 aa18.44■□□□□ 0.54
COL16A1-204ENST00000440437 SNX27Q96L92 541 aa18.44■□□□□ 0.54
COL16A1-204ENST00000440437 AK8Q96MA6 479 aa18.44■□□□□ 0.54
COL16A1-204ENST00000440437 UROC1Q96N76 676 aa18.44■□□□□ 0.54
COL16A1-204ENST00000440437 PLIN2Q99541 437 aa18.44■□□□□ 0.54
COL16A1-204ENST00000440437 CCDC94Q9BW85 323 aaPredicted RBP18.44■□□□□ 0.54
COL16A1-204ENST00000440437 TOPORSQ9NS56 1045 aaPredicted RBP18.44■□□□□ 0.54
COL16A1-204ENST00000440437 KCND2Q9NZV8 630 aa18.44■□□□□ 0.54
COL16A1-204ENST00000440437 SLC26A4O43511 780 aa18.43■□□□□ 0.54
COL16A1-204ENST00000440437 ZMYND10O75800 440 aa18.43■□□□□ 0.54
COL16A1-204ENST00000440437 PLA2G4BP0C869 781 aa18.43■□□□□ 0.54
COL16A1-204ENST00000440437 FGFR3P22607 806 aa18.43■□□□□ 0.54
COL16A1-204ENST00000440437 AVPR2P30518 371 aa18.43■□□□□ 0.54
COL16A1-204ENST00000440437 YARSP54577 528 aaKnown RBP18.43■□□□□ 0.54
COL16A1-204ENST00000440437 CUL4AQ13619 759 aa18.43■□□□□ 0.54
COL16A1-204ENST00000440437 PDXDC1Q6P996 788 aa18.43■□□□□ 0.54
COL16A1-204ENST00000440437 LRRC15Q8TF66 581 aa18.43■□□□□ 0.54
COL16A1-204ENST00000440437 STAMQ92783 540 aa18.43■□□□□ 0.54
COL16A1-204ENST00000440437 CDK5RAP3Q96JB5 506 aa18.43■□□□□ 0.54
COL16A1-204ENST00000440437 PRRX2Q99811 253 aa18.43■□□□□ 0.54
COL16A1-204ENST00000440437 PRKD2Q9BZL6 878 aa18.43■□□□□ 0.54
COL16A1-204ENST00000440437 NOTCH4Q99466 2003 aa18.42■□□□□ 0.54
COL16A1-204ENST00000440437 MEFVO15553 781 aaPredicted RBP18.42■□□□□ 0.54
COL16A1-204ENST00000440437 ADAM12O43184 909 aa18.42■□□□□ 0.54
COL16A1-204ENST00000440437 B3GAT3O94766 335 aa18.42■□□□□ 0.54
COL16A1-204ENST00000440437 MAPTP10636 758 aaKnown RBP18.42■□□□□ 0.54
COL16A1-204ENST00000440437 OSTNP61366 133 aa18.42■□□□□ 0.54
COL16A1-204ENST00000440437 ARSHQ5FYA8 562 aa18.42■□□□□ 0.54
COL16A1-204ENST00000440437 DCLRE1AQ6PJP8 1040 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms