RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 C10orf88Q9H8K7 445 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 HOMER3Q9NSC5 361 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 COL16A1Q07092 1604 aaPredicted RBP10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 ECM29Q5VYK3 1845 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 DENND3A2RUS2 1198 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 LRRD1A4D1F6 860 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 CFAP69A5D8W1 941 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 CHKAP35790 457 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 ASTE1Q2TB18 679 aaPredicted RBP10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 SLC25A41Q8N5S1 370 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 TTLL6Q8N841 843 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 LNX1Q8TBB1 728 aaPredicted RBP10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 UCMAQ8WVF2 138 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 IFT74Q96LB3 600 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 NPHS2Q9NP85 383 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 VAV3Q9UKW4 847 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 PCDHGC5Q9Y5F6 944 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 ALG6Q9Y672 507 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 BZW2Q9Y6E2 419 aaKnown RBP10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 ZHX2Q9Y6X8 837 aa10.6□□□□□ -0.71
CDC42SE1-202ENST00000439374 MYH7BA7E2Y1 1941 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 LRRIQ4A6NIV6 560 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 RASA4BC9J798 803 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 PI4K2BG5E9Z4 385 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 RASA4O43374 803 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 ATP9AO75110 1047 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 BANF1O75531 89 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 COPS2P61201 443 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 RPS6P62753 249 aaKnown RBP10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 PPP3CAQ08209 521 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 XRCC4Q13426 336 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 RBBP5Q15291 538 aaKnown RBP10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 PHLDB3Q6NSJ2 640 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 SWSAP1Q6NVH7 229 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 PABPC3Q9H361 631 aaKnown RBP10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 AIPL1Q9NZN9 384 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 PITPNM2Q9BZ72 1349 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 LRP5O75197 1615 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 SPDYE2BA6NHP3 402 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 SPDYE6P0CI01 402 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 RARAP10276 462 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 LMNB1P20700 586 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 COMTP21964 271 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 ACOT2P49753 483 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 BFSP1Q12934 665 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 BAATQ14032 418 aaPredicted RBP10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 RASIP1Q5U651 963 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 DCAF12L1Q5VU92 463 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 C1orf186Q6ZWK4 172 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 TAOK1Q7L7X3 1001 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 NT5DC3Q86UY8 548 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 TEKT4Q8WW24 435 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 NAF1Q96HR8 494 aaKnown RBP10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 FNBP1Q96RU3 617 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 TAOK3Q9H2K8 898 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 COL20A1Q9P218 1284 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 GABBR1Q9UBS5 961 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 APEX2Q9UBZ4 518 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 ASTN2O75129 1339 aaPredicted RBP10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 MGRN1O60291 552 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 GJB6O95452 261 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 EGFRP00533 1210 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 ATF7P17544 494 aaPredicted RBP10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 CA4P22748 312 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 MARK3P27448 753 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 YWHABP31946 246 aaKnown RBP10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 DYNLT1P63172 113 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 SGO2Q562F6 1265 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 WLSQ5T9L3 541 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 DLK2Q6UY11 383 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 EXOC3L1Q86VI1 746 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 SLC47A2Q86VL8 602 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 CDR2LQ86X02 465 aaPredicted RBP10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 SYCE1Q8N0S2 351 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 HSD17B14Q9BPX1 270 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 EDEM3Q9BZQ6 932 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 TRIM7Q9C029 511 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 TRIM4Q9C037 500 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 CDC42EP4Q9H3Q1 356 aaKnown RBP10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 KMT5AQ9NQR1 393 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 HSPBP1Q9NZL4 362 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 ADAM22Q9P0K1 906 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 TRAF3IP3Q9Y228 551 aa10.59□□□□□ -0.71
CDC42SE1-202ENST00000439374 LTBP4Q8N2S1 1624 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 KITP10721 976 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 DPEP1P16444 411 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 NT5C2P49902 561 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 C10orf76Q5T2E6 689 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 TTC27Q6P3X3 843 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 YTHDF3Q7Z739 585 aaKnown RBP10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 ANKMY2Q8IV38 441 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 LMNTD2Q8IXW0 634 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 CYP4X1Q8N118 509 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 XXYLT1Q8NBI6 393 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 SCFD2Q8WU76 684 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 CPA5Q8WXQ8 436 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 MKL1Q969V6 931 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 TTC1Q99614 292 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 IDI2Q9BXS1 227 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms