RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 KRTAP4-12Q9BQ66 201 aa4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 BDH2Q9BUT1 245 aa4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 DEF6Q9H4E7 631 aa4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 GNL3LQ9NVN8 582 aaKnown RBP4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 FAM30AQ9NZY2 134 aa4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 TCAF1Q9Y4C2 921 aa4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 ZMYM3Q14202 1370 aa4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 ATRNL1Q5VV63 1379 aa4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 FTLP02792 175 aaPredicted RBP4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 AMY1AP04745 511 aa4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 RAP2AP10114 183 aa4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 MTHFD1P11586 935 aaKnown RBP4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 SYN1P17600 705 aa4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 ATP5JP18859 108 aa4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 CLRN1P58418 232 aa4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 ATP8B2P98198 1209 aa4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 TARDBPQ13148 414 aaKnown RBP eCLIP4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 MTM1Q13496 603 aa4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 BMT2Q1RMZ1 405 aa4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 DCAF17Q5H9S7 520 aaPredicted RBP4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 AFMIDQ63HM1 303 aa4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 EFCAB12Q6NXP0 572 aa4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 DRICH1Q6PGQ1 229 aaPredicted RBP4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 B3GNT9Q6UX72 402 aa4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 MAMDC4Q6UXC1 1216 aa4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 SEM1Q6ZVN7 128 aa4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 C14orf80Q86SX3 495 aa4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 DENND1CQ8IV53 801 aa4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 MDGA1Q8NFP4 955 aa4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 Q8TCH9 128 aa4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 STON2Q8WXE9 905 aa4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 EDAQ92838 391 aa4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 LOXL4Q96JB6 756 aa4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 MRGPRX4Q96LA9 322 aa4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 MRI1Q9BV20 369 aa4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 LDAHQ9H6V9 325 aa4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 ANLNQ9NQW6 1124 aa4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 SH3BP1Q9Y3L3 701 aa4.84□□□□□ -1.63
LSM1P1-201ENST00000438629 CAPN14A8MX76 684 aa4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 CXorf49A8MYA2 514 aaPredicted RBP4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 GOLGA6L6A8MZA4 724 aa4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 POMCP01189 267 aa4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 AMHP03971 560 aa4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 ALAS1P13196 640 aa4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 HK3P52790 923 aa4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 ZNF267Q14586 743 aaPredicted RBP4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 KHDC1Q4VXA5 237 aaKnown RBP4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 MFSD14BQ5SR56 506 aa4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 DACT2Q5SW24 774 aa4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 GPRIN1Q7Z2K8 1008 aa4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 AOPEPQ8N6M6 819 aa4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 IFI44Q8TCB0 444 aa4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 TFAP2CQ92754 450 aa4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 RUNDC1Q96C34 613 aa4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 MTFMTQ96DP5 389 aaKnown RBP4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 CEP95Q96GE4 821 aa4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 C20orf173Q96LM9 149 aa4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 TAAR9Q96RI9 348 aa4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 CDK5RAP1Q96SZ6 601 aaKnown RBP4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 C11orf54Q9H0W9 315 aaPredicted RBP4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 WDCPQ9H6R7 721 aa4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 FAM204AQ9H8W3 233 aa4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 SPON1Q9HCB6 807 aa4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 AURKAIP1Q9NWT8 199 aaPredicted RBP4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 SIDT1Q9NXL6 827 aaKnown RBP4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 ACTL7AQ9Y615 435 aa4.83□□□□□ -1.64
LSM1P1-201ENST00000438629 VSTM5A8MXK1 200 aa4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 PRPF3O43395 683 aaKnown RBP4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 FOXD2O60548 495 aaPredicted RBP4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 STC2O76061 302 aa4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 MALP21145 153 aa4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 ACO1P21399 889 aaKnown RBP4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 PCSK1P29120 753 aa4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 HIBADHP31937 336 aaKnown RBP4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 FXR1P51114 621 aaKnown RBP eCLIP4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 TLE1Q04724 770 aa4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 NOGQ13253 232 aa4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 FAM214AQ32MH5 1076 aa4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 PABPC1LQ4VXU2 614 aaKnown RBP4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 ATXN7L2Q5T6C5 722 aaPredicted RBP4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 SRGAP1Q7Z6B7 1085 aa4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 PLXDC1Q8IUK5 500 aa4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 ELOA2Q8IYF1 753 aaPredicted RBP4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 ZGPATQ8N5A5 531 aaKnown RBP4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 IL17RDQ8NFM7 739 aa4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 ATXN2LQ8WWM7 1075 aaKnown RBP4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 DMRTA2Q96SC8 542 aa4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 ACO2Q99798 780 aaKnown RBP4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 KCNH6Q9H252 994 aa4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 LMBRD1Q9NUN5 540 aa4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 OBP2AQ9NY56 170 aa4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 POGKQ9P215 609 aa4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 STXBP5LQ9Y2K9 1186 aa4.82□□□□□ -1.64
LSM1P1-201ENST00000438629 CAND2O75155 1236 aa4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 UBXN7O94888 489 aa4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 ALDH1A3P47895 512 aa4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 SELENOPP49908 381 aa4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 MAP2K6P52564 334 aa4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 GPSM2P81274 684 aa4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 CNGB1Q14028 1251 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms