RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 FAM193BQ96PV7 902 aaPredicted RBP17.61■□□□□ 0.41
SNRPB-202ENST00000438552 CLSTN2Q9H4D0 955 aa17.61■□□□□ 0.41
SNRPB-202ENST00000438552 AAASQ9NRG9 546 aa17.61■□□□□ 0.41
SNRPB-202ENST00000438552 MTMR10Q9NXD2 777 aa17.61■□□□□ 0.41
SNRPB-202ENST00000438552 KANSL3Q9P2N6 904 aa17.61■□□□□ 0.41
SNRPB-202ENST00000438552 CACNG4Q9UBN1 327 aa17.61■□□□□ 0.41
SNRPB-202ENST00000438552 CPSF3Q9UKF6 684 aaKnown RBP17.61■□□□□ 0.41
SNRPB-202ENST00000438552 MAN1B1Q9UKM7 699 aa17.61■□□□□ 0.41
SNRPB-202ENST00000438552 GOLGA8IPA6NC78 632 aa17.6■□□□□ 0.41
SNRPB-202ENST00000438552 GOLGA8JA6NMD2 632 aa17.6■□□□□ 0.41
SNRPB-202ENST00000438552 NT5C1B-RDH14C9J2C7 533 aa17.6■□□□□ 0.41
SNRPB-202ENST00000438552 SLC11A1P49279 550 aa17.6■□□□□ 0.41
SNRPB-202ENST00000438552 DSC1Q08554 894 aa17.6■□□□□ 0.41
SNRPB-202ENST00000438552 KYAT1Q16773 422 aa17.6■□□□□ 0.41
SNRPB-202ENST00000438552 ISM2Q6H9L7 571 aa17.6■□□□□ 0.41
SNRPB-202ENST00000438552 KLHL23Q8NBE8 558 aa17.6■□□□□ 0.41
SNRPB-202ENST00000438552 MYLIPQ8WY64 445 aa17.6■□□□□ 0.41
SNRPB-202ENST00000438552 ZMAT2Q96NC0 199 aaKnown RBP17.6■□□□□ 0.41
SNRPB-202ENST00000438552 FAM213AQ9BRX8 229 aa17.6■□□□□ 0.41
SNRPB-202ENST00000438552 C11orf84Q9BUA3 381 aaPredicted RBP17.6■□□□□ 0.41
SNRPB-202ENST00000438552 KCTD10Q9H3F6 313 aa17.6■□□□□ 0.41
SNRPB-202ENST00000438552 CNTN3Q9P232 1028 aa17.6■□□□□ 0.41
SNRPB-202ENST00000438552 PCDHB12Q9Y5F1 795 aa17.6■□□□□ 0.41
SNRPB-202ENST00000438552 BIN1O00499 593 aa17.59■□□□□ 0.41
SNRPB-202ENST00000438552 CLIC2O15247 247 aa17.59■□□□□ 0.41
SNRPB-202ENST00000438552 CSPG5O95196 566 aa17.59■□□□□ 0.41
SNRPB-202ENST00000438552 ITGB1P05556 798 aa17.59■□□□□ 0.41
SNRPB-202ENST00000438552 THP07101 528 aa17.59■□□□□ 0.41
SNRPB-202ENST00000438552 CYP2J2P51589 502 aa17.59■□□□□ 0.41
SNRPB-202ENST00000438552 PPP2R3AQ06190 1150 aa17.59■□□□□ 0.41
SNRPB-202ENST00000438552 GPM6BQ13491 265 aa17.59■□□□□ 0.41
SNRPB-202ENST00000438552 NAB2Q15742 525 aa17.59■□□□□ 0.41
SNRPB-202ENST00000438552 XKR4Q5GH76 650 aa17.59■□□□□ 0.41
SNRPB-202ENST00000438552 ZNF658Q5TYW1 1059 aaPredicted RBP17.59■□□□□ 0.41
SNRPB-202ENST00000438552 CRELD2Q6UXH1 353 aaPredicted RBP17.59■□□□□ 0.41
SNRPB-202ENST00000438552 ALKAL1Q6UXT8 129 aa17.59■□□□□ 0.41
SNRPB-202ENST00000438552 HS2ST1Q7LGA3 356 aa17.59■□□□□ 0.41
SNRPB-202ENST00000438552 TMEM173Q86WV6 379 aaPredicted RBP17.59■□□□□ 0.41
SNRPB-202ENST00000438552 COLGALT2Q8IYK4 626 aa17.59■□□□□ 0.41
SNRPB-202ENST00000438552 SLC39A11Q8N1S5 342 aa17.59■□□□□ 0.41
SNRPB-202ENST00000438552 BCL7CQ8WUZ0 217 aaPredicted RBP17.59■□□□□ 0.41
SNRPB-202ENST00000438552 FAM212AQ96EL1 285 aa17.59■□□□□ 0.41
SNRPB-202ENST00000438552 PPP1R10Q96QC0 940 aaKnown RBP17.59■□□□□ 0.41
SNRPB-202ENST00000438552 CDX2Q99626 313 aaPredicted RBP17.59■□□□□ 0.41
SNRPB-202ENST00000438552 PLVAPQ9BX97 442 aa17.59■□□□□ 0.41
SNRPB-202ENST00000438552 NUP62CLQ9H1M0 184 aa17.59■□□□□ 0.41
SNRPB-202ENST00000438552 RPF1Q9H9Y2 349 aaKnown RBP17.59■□□□□ 0.41
SNRPB-202ENST00000438552 HSPBP1Q9NZL4 362 aa17.59■□□□□ 0.41
SNRPB-202ENST00000438552 SMIM28A0A1B0GU29 152 aa17.58■□□□□ 0.4
SNRPB-202ENST00000438552 TTC26A0AVF1 554 aa17.58■□□□□ 0.4
SNRPB-202ENST00000438552 CASTOR2A6NHX0 329 aa17.58■□□□□ 0.4
SNRPB-202ENST00000438552 F8W810 466 aa17.58■□□□□ 0.4
SNRPB-202ENST00000438552 H3BNC9 293 aa17.58■□□□□ 0.4
SNRPB-202ENST00000438552 GRM6O15303 877 aa17.58■□□□□ 0.4
SNRPB-202ENST00000438552 LPXNO60711 386 aa17.58■□□□□ 0.4
SNRPB-202ENST00000438552 FGF18O76093 207 aa17.58■□□□□ 0.4
SNRPB-202ENST00000438552 RB1P06400 928 aa17.58■□□□□ 0.4
SNRPB-202ENST00000438552 GALTP07902 379 aa17.58■□□□□ 0.4
SNRPB-202ENST00000438552 MCM4P33991 863 aa17.58■□□□□ 0.4
SNRPB-202ENST00000438552 OR1G1P47890 313 aa17.58■□□□□ 0.4
SNRPB-202ENST00000438552 ALDH7A1P49419 539 aaKnown RBP17.58■□□□□ 0.4
SNRPB-202ENST00000438552 SPAG1Q07617 926 aa17.58■□□□□ 0.4
SNRPB-202ENST00000438552 ADGRE1Q14246 886 aa17.58■□□□□ 0.4
SNRPB-202ENST00000438552 GUF1Q8N442 669 aaKnown RBP17.58■□□□□ 0.4
SNRPB-202ENST00000438552 RABGGTAQ92696 567 aa17.58■□□□□ 0.4
SNRPB-202ENST00000438552 P2RX5Q93086 422 aa17.58■□□□□ 0.4
SNRPB-202ENST00000438552 C18orf25Q96B23 403 aaPredicted RBP17.58■□□□□ 0.4
SNRPB-202ENST00000438552 PAAF1Q9BRP4 392 aa17.58■□□□□ 0.4
SNRPB-202ENST00000438552 TMEM175Q9BSA9 504 aa17.58■□□□□ 0.4
SNRPB-202ENST00000438552 GOLGA2P5Q9HBQ8 144 aa17.58■□□□□ 0.4
SNRPB-202ENST00000438552 ALG13Q9NP73 1137 aaKnown RBP17.58■□□□□ 0.4
SNRPB-202ENST00000438552 PRG3Q9Y2Y8 225 aaPredicted RBP17.58■□□□□ 0.4
SNRPB-202ENST00000438552 LACTBL1A8MY62 500 aa17.57■□□□□ 0.4
SNRPB-202ENST00000438552 NRP1O14786 923 aa17.57■□□□□ 0.4
SNRPB-202ENST00000438552 EXTL3O43909 919 aa17.57■□□□□ 0.4
SNRPB-202ENST00000438552 KIF20AO95235 890 aa17.57■□□□□ 0.4
SNRPB-202ENST00000438552 KCNE1P15382 129 aa17.57■□□□□ 0.4
SNRPB-202ENST00000438552 PPM1AP35813 382 aa17.57■□□□□ 0.4
SNRPB-202ENST00000438552 PRCPP42785 496 aa17.57■□□□□ 0.4
SNRPB-202ENST00000438552 WNT7BP56706 349 aa17.57■□□□□ 0.4
SNRPB-202ENST00000438552 SOX4Q06945 474 aaPredicted RBP17.57■□□□□ 0.4
SNRPB-202ENST00000438552 TUSC3Q13454 348 aa17.57■□□□□ 0.4
SNRPB-202ENST00000438552 BRSK2Q8IWQ3 736 aa17.57■□□□□ 0.4
SNRPB-202ENST00000438552 GPD1LQ8N335 351 aa17.57■□□□□ 0.4
SNRPB-202ENST00000438552 TMEM130Q8N3G9 435 aa17.57■□□□□ 0.4
SNRPB-202ENST00000438552 KIF12Q96FN5 646 aa17.57■□□□□ 0.4
SNRPB-202ENST00000438552 GAS2L1Q99501 681 aaPredicted RBP17.57■□□□□ 0.4
SNRPB-202ENST00000438552 PLEKHA5Q9HAU0 1116 aa17.57■□□□□ 0.4
SNRPB-202ENST00000438552 RBAKQ9NYW8 714 aaPredicted RBP17.57■□□□□ 0.4
SNRPB-202ENST00000438552 SPG21Q9NZD8 308 aa17.57■□□□□ 0.4
SNRPB-202ENST00000438552 KIAA1468Q9P260 1216 aa17.57■□□□□ 0.4
SNRPB-202ENST00000438552 TUBGCP4Q9UGJ1 667 aa17.57■□□□□ 0.4
SNRPB-202ENST00000438552 REV3LO60673 3130 aa17.57■□□□□ 0.4
SNRPB-202ENST00000438552 LDHAP00338 332 aaKnown RBP17.56■□□□□ 0.4
SNRPB-202ENST00000438552 NFICP08651 508 aa17.56■□□□□ 0.4
SNRPB-202ENST00000438552 BMP6P22004 513 aa17.56■□□□□ 0.4
SNRPB-202ENST00000438552 DNAJB1P25685 340 aa17.56■□□□□ 0.4
SNRPB-202ENST00000438552 SNRPFP62306 86 aaKnown RBP17.56■□□□□ 0.4
SNRPB-202ENST00000438552 MORC3Q14149 939 aa17.56■□□□□ 0.4
SNRPB-202ENST00000438552 JADE1Q6IE81 842 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms