RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 TCEAL4Q96EI5 215 aa12.64□□□□□ -0.39
RTN4-211ENST00000438462 MED8Q96G25 268 aa12.64□□□□□ -0.39
RTN4-211ENST00000438462 LIN37Q96GY3 246 aaPredicted RBP12.64□□□□□ -0.39
RTN4-211ENST00000438462 CDHR1Q96JP9 859 aa12.64□□□□□ -0.39
RTN4-211ENST00000438462 TRAIPQ9BWF2 469 aa12.64□□□□□ -0.39
RTN4-211ENST00000438462 GTSE1Q9NYZ3 720 aa12.64□□□□□ -0.39
RTN4-211ENST00000438462 KIAA1522Q9P206 1035 aaPredicted RBP12.64□□□□□ -0.39
RTN4-211ENST00000438462 SLC9A2Q9UBY0 812 aa12.64□□□□□ -0.39
RTN4-211ENST00000438462 KIAA1549LQ6ZVL6 1849 aa12.64□□□□□ -0.39
RTN4-211ENST00000438462 UTP20O75691 2785 aaKnown RBP12.64□□□□□ -0.39
RTN4-211ENST00000438462 HEPACAM2A8MVW5 462 aa12.63□□□□□ -0.39
RTN4-211ENST00000438462 TRIM6-TRIM34B2RNG4 842 aa12.63□□□□□ -0.39
RTN4-211ENST00000438462 RNF40O75150 1001 aa12.63□□□□□ -0.39
RTN4-211ENST00000438462 SEMG2Q02383 582 aa12.63□□□□□ -0.39
RTN4-211ENST00000438462 GFPT1Q06210 699 aaPredicted RBP12.63□□□□□ -0.39
RTN4-211ENST00000438462 KRTAP21-3Q3LHN1 58 aa12.63□□□□□ -0.39
RTN4-211ENST00000438462 USP39Q53GS9 565 aaKnown RBP12.63□□□□□ -0.39
RTN4-211ENST00000438462 ASPRV1Q53RT3 343 aa12.63□□□□□ -0.39
RTN4-211ENST00000438462 RTP2Q5QGT7 225 aa12.63□□□□□ -0.39
RTN4-211ENST00000438462 YAF2Q8IY57 180 aa12.63□□□□□ -0.39
RTN4-211ENST00000438462 GPR65Q8IYL9 337 aa12.63□□□□□ -0.39
RTN4-211ENST00000438462 CMTR1Q8N1G2 835 aaKnown RBP12.63□□□□□ -0.39
RTN4-211ENST00000438462 BAP1Q92560 729 aa12.63□□□□□ -0.39
RTN4-211ENST00000438462 NXPE2Q96DL1 559 aa12.63□□□□□ -0.39
RTN4-211ENST00000438462 ZSWIM3Q96MP5 696 aa12.63□□□□□ -0.39
RTN4-211ENST00000438462 SCLT1Q96NL6 688 aa12.63□□□□□ -0.39
RTN4-211ENST00000438462 PHF12Q96QT6 1004 aa12.63□□□□□ -0.39
RTN4-211ENST00000438462 KIF2CQ99661 725 aa12.63□□□□□ -0.39
RTN4-211ENST00000438462 RSAD1Q9HA92 442 aa12.63□□□□□ -0.39
RTN4-211ENST00000438462 AVENQ9NQS1 362 aaPredicted RBP12.63□□□□□ -0.39
RTN4-211ENST00000438462 DNAAF2Q9NVR5 837 aaKnown RBP12.63□□□□□ -0.39
RTN4-211ENST00000438462 GOLGA4Q13439 2230 aaKnown RBP12.63□□□□□ -0.39
RTN4-211ENST00000438462 TDRD15B5MCY1 1934 aaKnown RBP12.62□□□□□ -0.39
RTN4-211ENST00000438462 LRRK2Q5S007 2527 aa12.62□□□□□ -0.39
RTN4-211ENST00000438462 PLK4O00444 970 aa12.62□□□□□ -0.39
RTN4-211ENST00000438462 CHADO15335 359 aa12.62□□□□□ -0.39
RTN4-211ENST00000438462 RNF113AO15541 343 aaKnown RBP12.62□□□□□ -0.39
RTN4-211ENST00000438462 TRIM27P14373 513 aa12.62□□□□□ -0.39
RTN4-211ENST00000438462 PTGER3P43115 390 aa12.62□□□□□ -0.39
RTN4-211ENST00000438462 SLC26A2P50443 739 aa12.62□□□□□ -0.39
RTN4-211ENST00000438462 RAB27AP51159 221 aa12.62□□□□□ -0.39
RTN4-211ENST00000438462 ACTR2P61160 394 aa12.62□□□□□ -0.39
RTN4-211ENST00000438462 ZNF484Q5JVG2 852 aa12.62□□□□□ -0.39
RTN4-211ENST00000438462 C6orf132Q5T0Z8 1188 aa12.62□□□□□ -0.39
RTN4-211ENST00000438462 ZNF746Q6NUN9 644 aaPredicted RBP12.62□□□□□ -0.39
RTN4-211ENST00000438462 TMC8Q8IU68 726 aa12.62□□□□□ -0.39
RTN4-211ENST00000438462 DAGLBQ8NCG7 672 aa12.62□□□□□ -0.39
RTN4-211ENST00000438462 TTC14Q96N46 770 aa12.62□□□□□ -0.39
RTN4-211ENST00000438462 MAP7D2Q96T17 732 aa12.62□□□□□ -0.39
RTN4-211ENST00000438462 SEC62Q99442 399 aaKnown RBP12.62□□□□□ -0.39
RTN4-211ENST00000438462 CLSTN3Q9BQT9 956 aa12.62□□□□□ -0.39
RTN4-211ENST00000438462 FAM117AQ9C073 453 aa12.62□□□□□ -0.39
RTN4-211ENST00000438462 TOR4AQ9NXH8 423 aa12.62□□□□□ -0.39
RTN4-211ENST00000438462 KANSL3Q9P2N6 904 aa12.62□□□□□ -0.39
RTN4-211ENST00000438462 SLC6A14Q9UN76 642 aa12.62□□□□□ -0.39
RTN4-211ENST00000438462 PIN4Q9Y237 131 aaKnown RBP12.62□□□□□ -0.39
RTN4-211ENST00000438462 E9PAM4 449 aa12.61□□□□□ -0.39
RTN4-211ENST00000438462 TNFRSF10BO14763 440 aa12.61□□□□□ -0.39
RTN4-211ENST00000438462 FGRP09769 529 aa12.61□□□□□ -0.39
RTN4-211ENST00000438462 ITGB5P18084 799 aa12.61□□□□□ -0.39
RTN4-211ENST00000438462 GPC3P51654 580 aa12.61□□□□□ -0.39
RTN4-211ENST00000438462 MTMR1Q13613 665 aa12.61□□□□□ -0.39
RTN4-211ENST00000438462 PKDCCQ504Y2 493 aa12.61□□□□□ -0.39
RTN4-211ENST00000438462 C2orf27AQ580R0 203 aa12.61□□□□□ -0.39
RTN4-211ENST00000438462 PEAR1Q5VY43 1037 aaPredicted RBP12.61□□□□□ -0.39
RTN4-211ENST00000438462 FSTL4Q6MZW2 842 aa12.61□□□□□ -0.39
RTN4-211ENST00000438462 KBTBD3Q8NAB2 608 aa12.61□□□□□ -0.39
RTN4-211ENST00000438462 PNMA1Q8ND90 353 aa12.61□□□□□ -0.39
RTN4-211ENST00000438462 TTC9Q92623 222 aa12.61□□□□□ -0.39
RTN4-211ENST00000438462 PGBD4Q96DM1 585 aa12.61□□□□□ -0.39
RTN4-211ENST00000438462 RSPRY1Q96DX4 576 aa12.61□□□□□ -0.39
RTN4-211ENST00000438462 PI4K2AQ9BTU6 479 aa12.61□□□□□ -0.39
RTN4-211ENST00000438462 LRRCC1Q9C099 1032 aa12.61□□□□□ -0.39
RTN4-211ENST00000438462 ANAPC4Q9UJX5 808 aa12.61□□□□□ -0.39
RTN4-211ENST00000438462 MYO16Q9Y6X6 1858 aa12.61□□□□□ -0.39
RTN4-211ENST00000438462 PTPRDP23468 1912 aa12.6□□□□□ -0.39
RTN4-211ENST00000438462 HELZP42694 1942 aaKnown RBP12.6□□□□□ -0.39
RTN4-211ENST00000438462 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.6□□□□□ -0.39
RTN4-211ENST00000438462 ZBTB5O15062 677 aa12.6□□□□□ -0.39
RTN4-211ENST00000438462 FOXP2O15409 715 aa12.6□□□□□ -0.39
RTN4-211ENST00000438462 ADAM12O43184 909 aa12.6□□□□□ -0.39
RTN4-211ENST00000438462 CBFA2T3O75081 653 aa12.6□□□□□ -0.39
RTN4-211ENST00000438462 ZNF623O75123 536 aa12.6□□□□□ -0.39
RTN4-211ENST00000438462 CCR2P41597 374 aa12.6□□□□□ -0.39
RTN4-211ENST00000438462 NFATC3Q12968 1075 aa12.6□□□□□ -0.39
RTN4-211ENST00000438462 SLC14A1Q13336 389 aa12.6□□□□□ -0.39
RTN4-211ENST00000438462 DMC1Q14565 340 aa12.6□□□□□ -0.39
RTN4-211ENST00000438462 LPCAT2Q7L5N7 544 aa12.6□□□□□ -0.39
RTN4-211ENST00000438462 LRRC71Q8N4P6 559 aa12.6□□□□□ -0.39
RTN4-211ENST00000438462 SPRYD3Q8NCJ5 442 aa12.6□□□□□ -0.39
RTN4-211ENST00000438462 SNIP1Q8TAD8 396 aaKnown RBP12.6□□□□□ -0.39
RTN4-211ENST00000438462 ZSCAN18Q8TBC5 510 aaPredicted RBP12.6□□□□□ -0.39
RTN4-211ENST00000438462 ZFYVE19Q96K21 471 aa12.6□□□□□ -0.39
RTN4-211ENST00000438462 TMEM209Q96SK2 561 aa12.6□□□□□ -0.39
RTN4-211ENST00000438462 CAPN10Q9HC96 672 aa12.6□□□□□ -0.39
RTN4-211ENST00000438462 SNTG2Q9NY99 539 aa12.6□□□□□ -0.39
RTN4-211ENST00000438462 PILRBQ9UKJ0 227 aa12.6□□□□□ -0.39
RTN4-211ENST00000438462 AHCTF1Q8WYP5 2266 aa12.6□□□□□ -0.39
RTN4-211ENST00000438462 USP9YO00507 2555 aaPredicted RBP12.59□□□□□ -0.39
RTN4-211ENST00000438462 GJB3O75712 270 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms