RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 IRX1P78414 480 aaPredicted RBP11.16□□□□□ -0.62
CLSTN1-203ENST00000435891 IFI35P80217 286 aaPredicted RBP11.16□□□□□ -0.62
CLSTN1-203ENST00000435891 GHRHRQ02643 423 aa11.16□□□□□ -0.62
CLSTN1-203ENST00000435891 EN1Q05925 392 aaPredicted RBP11.16□□□□□ -0.62
CLSTN1-203ENST00000435891 TCEAL1Q15170 157 aa11.16□□□□□ -0.62
CLSTN1-203ENST00000435891 ARFGAP2Q8N6H7 521 aa11.16□□□□□ -0.62
CLSTN1-203ENST00000435891 TLCD1Q96CP7 247 aa11.16□□□□□ -0.62
CLSTN1-203ENST00000435891 RPS6KC1Q96S38 1066 aa11.16□□□□□ -0.62
CLSTN1-203ENST00000435891 PSMD1Q99460 953 aa11.16□□□□□ -0.62
CLSTN1-203ENST00000435891 WDR64B1ANS9 1081 aa11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 BAATQ14032 418 aaPredicted RBP11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 SLC13A5Q86YT5 568 aaPredicted RBP11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 CNKSR2Q8WXI2 1034 aa11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 ATG4CQ96DT6 458 aa11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 RAB20Q9NX57 234 aa11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 PCYOX1Q9UHG3 505 aa11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 DDX20Q9UHI6 824 aaKnown RBP11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 COQ4Q9Y3A0 265 aa11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 TP73O15350 636 aa11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 CLDN3O15551 220 aa11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 AP1G2O75843 785 aa11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 CYP1A2P05177 515 aa11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 CHRNA3P32297 505 aa11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 SLCO1A2P46721 670 aa11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 FNTAP49354 379 aa11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 CCNHP51946 323 aaPredicted RBP11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 BYSLQ13895 437 aaKnown RBP11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 ARMC3Q5W041 872 aa11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 C6orf89Q6UWU4 347 aa11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 RNF207Q6ZRF8 634 aa11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 ARMC2Q8NEN0 867 aa11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 TBC1D31Q96DN5 1066 aa11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 ZBTB10Q96DT7 871 aa11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 SPDL1Q96EA4 605 aa11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 ADAM7Q9H2U9 754 aa11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 KMT5AQ9NQR1 393 aa11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 KLC4Q9NSK0 619 aa11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 GABBR1Q9UBS5 961 aa11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 ZNRF3Q9ULT6 936 aa11.15□□□□□ -0.62
CLSTN1-203ENST00000435891 GOLGA6L7A0A1B0GV03 622 aa11.15□□□□□ -0.63
CLSTN1-203ENST00000435891 KIF3CO14782 793 aa11.15□□□□□ -0.63
CLSTN1-203ENST00000435891 MAPK13O15264 365 aa11.15□□□□□ -0.63
CLSTN1-203ENST00000435891 RGS20O76081 388 aa11.15□□□□□ -0.63
CLSTN1-203ENST00000435891 MTA2O94776 668 aa11.15□□□□□ -0.63
CLSTN1-203ENST00000435891 GPC3P51654 580 aa11.15□□□□□ -0.63
CLSTN1-203ENST00000435891 MFAP3P55082 362 aa11.15□□□□□ -0.63
CLSTN1-203ENST00000435891 CDR2Q01850 454 aa11.15□□□□□ -0.63
CLSTN1-203ENST00000435891 SEL1L2Q5TEA6 688 aa11.15□□□□□ -0.63
CLSTN1-203ENST00000435891 ARHGEF16Q5VV41 709 aa11.15□□□□□ -0.63
CLSTN1-203ENST00000435891 TAS1R3Q7RTX0 852 aa11.15□□□□□ -0.63
CLSTN1-203ENST00000435891 CCDC105Q8IYK2 499 aa11.15□□□□□ -0.63
CLSTN1-203ENST00000435891 RTKN2Q8IZC4 609 aa11.15□□□□□ -0.63
CLSTN1-203ENST00000435891 FBXL13Q8NEE6 735 aa11.15□□□□□ -0.63
CLSTN1-203ENST00000435891 EPS8L3Q8TE67 593 aaKnown RBP11.15□□□□□ -0.63
CLSTN1-203ENST00000435891 C1orf54Q8WWF1 131 aa11.15□□□□□ -0.63
CLSTN1-203ENST00000435891 POMGNT1Q8WZA1 660 aa11.15□□□□□ -0.63
CLSTN1-203ENST00000435891 CEP170P1Q96L14 293 aa11.15□□□□□ -0.63
CLSTN1-203ENST00000435891 PAGR1Q9BTK6 254 aa11.15□□□□□ -0.63
CLSTN1-203ENST00000435891 KIAA1683Q9H0B3 1180 aa11.15□□□□□ -0.63
CLSTN1-203ENST00000435891 RPAP3Q9H6T3 665 aaPredicted RBP11.15□□□□□ -0.63
CLSTN1-203ENST00000435891 TMEM8AQ9HCN3 771 aa11.15□□□□□ -0.63
CLSTN1-203ENST00000435891 MYOZ2Q9NPC6 264 aa11.15□□□□□ -0.63
CLSTN1-203ENST00000435891 DOCK5Q9H7D0 1870 aa11.15□□□□□ -0.63
CLSTN1-203ENST00000435891 O00370 1275 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 STBD1O95210 358 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 NUDT17P0C025 328 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 SSTR3P32745 418 aaPredicted RBP11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 COILP38432 576 aaPredicted RBP11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 DRG2P55039 364 aaKnown RBP11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 DMP1Q13316 513 aaPredicted RBP11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 SCARA3Q6AZY7 606 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 MICALCLQ6ZW33 695 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 MTMR14Q8NCE2 650 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 MICAL1Q8TDZ2 1067 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 ZNF516Q92618 1163 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 XPNPEP1Q9NQW7 623 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 TCEAL9Q9UHQ7 104 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 PMM2O15305 246 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 CFHP08603 1231 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 KRT5P13647 590 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 PDE6CP51160 858 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 CYP24A1Q07973 514 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 SNX1Q13596 522 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 ZKSCAN8Q15776 578 aaPredicted RBP11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 PSPC1Q8WXF1 523 aaKnown RBP11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 ATG4AQ8WYN0 398 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 NT5C1BQ96P26 610 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 FAM213AQ9BRX8 229 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 MTFR1LQ9H019 292 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 WNT8AQ9H1J5 351 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 AZI2Q9H6S1 392 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 GTF3C4Q9UKN8 822 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 PPP2R5EQ16537 467 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 CPA5Q8WXQ8 436 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 LPAR1Q92633 364 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 MFSD14AQ96MC6 490 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 FBXL18Q96ME1 805 aa11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.14□□□□□ -0.63
CLSTN1-203ENST00000435891 HNRNPDLO14979 420 aaKnown RBP11.13□□□□□ -0.63
CLSTN1-203ENST00000435891 SMTNP53814 917 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms