RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 CLTAP09496 248 aa20.06■□□□□ 0.8
HLA-F-220ENST00000434407 KCNE1P15382 129 aa20.06■□□□□ 0.8
HLA-F-220ENST00000434407 ADSSP30520 456 aa20.06■□□□□ 0.8
HLA-F-220ENST00000434407 IRS1P35568 1242 aa20.06■□□□□ 0.8
HLA-F-220ENST00000434407 YARSP54577 528 aaKnown RBP20.06■□□□□ 0.8
HLA-F-220ENST00000434407 ERVFC1P60507 584 aa20.06■□□□□ 0.8
HLA-F-220ENST00000434407 OSTNP61366 133 aa20.06■□□□□ 0.8
HLA-F-220ENST00000434407 TUSC3Q13454 348 aa20.06■□□□□ 0.8
HLA-F-220ENST00000434407 SNW1Q13573 536 aaKnown RBP20.06■□□□□ 0.8
HLA-F-220ENST00000434407 COL19A1Q14993 1142 aa20.06■□□□□ 0.8
HLA-F-220ENST00000434407 SLC10A6Q3KNW5 377 aa20.06■□□□□ 0.8
HLA-F-220ENST00000434407 FAM26FQ5R3K3 315 aa20.06■□□□□ 0.8
HLA-F-220ENST00000434407 SLFN12LQ6IEE8 588 aa20.06■□□□□ 0.8
HLA-F-220ENST00000434407 DDX53Q86TM3 631 aaKnown RBP20.06■□□□□ 0.8
HLA-F-220ENST00000434407 MICALL1Q8N3F8 863 aa20.06■□□□□ 0.8
HLA-F-220ENST00000434407 TMEM87AQ8NBN3 555 aa20.06■□□□□ 0.8
HLA-F-220ENST00000434407 HPS3Q969F9 1004 aa20.06■□□□□ 0.8
HLA-F-220ENST00000434407 TMEM169Q96HH4 297 aa20.06■□□□□ 0.8
HLA-F-220ENST00000434407 VN1R3Q9BXE9 311 aa20.06■□□□□ 0.8
HLA-F-220ENST00000434407 IKZF4Q9H2S9 585 aa20.06■□□□□ 0.8
HLA-F-220ENST00000434407 MARCH5Q9NX47 278 aa20.06■□□□□ 0.8
HLA-F-220ENST00000434407 CNTN3Q9P232 1028 aa20.06■□□□□ 0.8
HLA-F-220ENST00000434407 SMIM28A0A1B0GU29 152 aa20.05■□□□□ 0.8
HLA-F-220ENST00000434407 GOLGA6L4A6NEF3 574 aa20.05■□□□□ 0.8
HLA-F-220ENST00000434407 TISP43B9A030 160 aa20.05■□□□□ 0.8
HLA-F-220ENST00000434407 PRPF6O94906 941 aaKnown RBP20.05■□□□□ 0.8
HLA-F-220ENST00000434407 HARSP12081 509 aaKnown RBP20.05■□□□□ 0.8
HLA-F-220ENST00000434407 HOXD13P35453 343 aa20.05■□□□□ 0.8
HLA-F-220ENST00000434407 TCEAL5Q5H9L2 206 aa20.05■□□□□ 0.8
HLA-F-220ENST00000434407 STXBP4Q6ZWJ1 553 aa20.05■□□□□ 0.8
HLA-F-220ENST00000434407 ZNF507Q8TCN5 953 aa20.05■□□□□ 0.8
HLA-F-220ENST00000434407 PPM1EQ8WY54 764 aa20.05■□□□□ 0.8
HLA-F-220ENST00000434407 ZMAT2Q96NC0 199 aaKnown RBP20.05■□□□□ 0.8
HLA-F-220ENST00000434407 MSTO1Q9BUK6 570 aa20.05■□□□□ 0.8
HLA-F-220ENST00000434407 PLEKHA5Q9HAU0 1116 aa20.05■□□□□ 0.8
HLA-F-220ENST00000434407 STK39Q9UEW8 545 aa20.05■□□□□ 0.8
HLA-F-220ENST00000434407 TTC26A0AVF1 554 aa20.04■□□□□ 0.8
HLA-F-220ENST00000434407 MATR3P43243 847 aaKnown RBP eCLIP20.04■□□□□ 0.8
HLA-F-220ENST00000434407 OR1G1P47890 313 aa20.04■□□□□ 0.8
HLA-F-220ENST00000434407 POU5F1Q01860 360 aaKnown RBP20.04■□□□□ 0.8
HLA-F-220ENST00000434407 POSTNQ15063 836 aa20.04■□□□□ 0.8
HLA-F-220ENST00000434407 SEZ6Q53EL9 994 aa20.04■□□□□ 0.8
HLA-F-220ENST00000434407 ZBTB41Q5SVQ8 909 aa20.04■□□□□ 0.8
HLA-F-220ENST00000434407 RNF168Q8IYW5 571 aaPredicted RBP20.04■□□□□ 0.8
HLA-F-220ENST00000434407 TMEM206Q9H813 350 aa20.04■□□□□ 0.8
HLA-F-220ENST00000434407 NGRNQ9NPE2 291 aaKnown RBP20.04■□□□□ 0.8
HLA-F-220ENST00000434407 CPSF3Q9UKF6 684 aaKnown RBP20.04■□□□□ 0.8
HLA-F-220ENST00000434407 UBE4BO95155 1302 aa20.03■□□□□ 0.8
HLA-F-220ENST00000434407 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.03■□□□□ 0.8
HLA-F-220ENST00000434407 NR1I2O75469 434 aa20.03■□□□□ 0.8
HLA-F-220ENST00000434407 CXCL8P10145 99 aa20.03■□□□□ 0.8
HLA-F-220ENST00000434407 GARTP22102 1010 aa20.03■□□□□ 0.8
HLA-F-220ENST00000434407 TNFSF9P41273 254 aa20.03■□□□□ 0.8
HLA-F-220ENST00000434407 FAM160A1Q05DH4 1040 aa20.03■□□□□ 0.8
HLA-F-220ENST00000434407 DPYDQ12882 1025 aa20.03■□□□□ 0.8
HLA-F-220ENST00000434407 ENOX2Q16206 610 aaKnown RBP20.03■□□□□ 0.8
HLA-F-220ENST00000434407 BMT2Q1RMZ1 405 aa20.03■□□□□ 0.8
HLA-F-220ENST00000434407 TPRNQ4KMQ1 711 aa20.03■□□□□ 0.8
HLA-F-220ENST00000434407 IPO9Q96P70 1041 aaKnown RBP20.03■□□□□ 0.8
HLA-F-220ENST00000434407 PAAF1Q9BRP4 392 aa20.03■□□□□ 0.8
HLA-F-220ENST00000434407 ZBP1Q9H171 429 aa20.03■□□□□ 0.8
HLA-F-220ENST00000434407 PRG3Q9Y2Y8 225 aaPredicted RBP20.03■□□□□ 0.8
HLA-F-220ENST00000434407 PCDHGC5Q9Y5F6 944 aa20.03■□□□□ 0.8
HLA-F-220ENST00000434407 IRAK3Q9Y616 596 aa20.03■□□□□ 0.8
HLA-F-220ENST00000434407 NCOR1O75376 2440 aa20.03■□□□□ 0.8
HLA-F-220ENST00000434407 F8W810 466 aa20.02■□□□□ 0.8
HLA-F-220ENST00000434407 PRR29P0C7W0 189 aa20.02■□□□□ 0.8
HLA-F-220ENST00000434407 HYAL1Q12794 435 aa20.02■□□□□ 0.8
HLA-F-220ENST00000434407 PSMD2Q13200 908 aa20.02■□□□□ 0.8
HLA-F-220ENST00000434407 KMT5BQ4FZB7 885 aa20.02■□□□□ 0.8
HLA-F-220ENST00000434407 GLRA4Q5JXX5 417 aa20.02■□□□□ 0.8
HLA-F-220ENST00000434407 KANK3Q6NY19 840 aa20.02■□□□□ 0.8
HLA-F-220ENST00000434407 CLEC17AQ6ZS10 378 aa20.02■□□□□ 0.8
HLA-F-220ENST00000434407 ADGRD2Q7Z7M1 963 aa20.02■□□□□ 0.8
HLA-F-220ENST00000434407 VPS52Q8N1B4 723 aa20.02■□□□□ 0.8
HLA-F-220ENST00000434407 SCFD1Q8WVM8 642 aa20.02■□□□□ 0.8
HLA-F-220ENST00000434407 POMGNT1Q8WZA1 660 aa20.02■□□□□ 0.8
HLA-F-220ENST00000434407 TSPAN18Q96SJ8 248 aa20.02■□□□□ 0.8
HLA-F-220ENST00000434407 TCF25Q9BQ70 676 aa20.02■□□□□ 0.8
HLA-F-220ENST00000434407 COLEC11Q9BWP8 271 aa20.02■□□□□ 0.8
HLA-F-220ENST00000434407 PRDM6Q9NQX0 595 aa20.02■□□□□ 0.8
HLA-F-220ENST00000434407 SLC38A7Q9NVC3 462 aa20.02■□□□□ 0.8
HLA-F-220ENST00000434407 CACNG4Q9UBN1 327 aa20.02■□□□□ 0.8
HLA-F-220ENST00000434407 AGO2Q9UKV8 859 aaKnown RBP20.02■□□□□ 0.8
HLA-F-220ENST00000434407 VWA8A3KMH1 1905 aa20.02■□□□□ 0.79
HLA-F-220ENST00000434407 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.01■□□□□ 0.79
HLA-F-220ENST00000434407 CASTOR2A6NHX0 329 aa20.01■□□□□ 0.79
HLA-F-220ENST00000434407 TMEM189-UBE2V1I3L0A0 370 aa20.01■□□□□ 0.79
HLA-F-220ENST00000434407 NCK2O43639 380 aa20.01■□□□□ 0.79
HLA-F-220ENST00000434407 RPN1P04843 607 aaKnown RBP20.01■□□□□ 0.79
HLA-F-220ENST00000434407 CTSAP10619 480 aa20.01■□□□□ 0.79
HLA-F-220ENST00000434407 SOX4Q06945 474 aaPredicted RBP20.01■□□□□ 0.79
HLA-F-220ENST00000434407 HSP90AA2PQ14568 343 aaPredicted RBP20.01■□□□□ 0.79
HLA-F-220ENST00000434407 ZBTB6Q15916 424 aa20.01■□□□□ 0.79
HLA-F-220ENST00000434407 CTC1Q2NKJ3 1217 aa20.01■□□□□ 0.79
HLA-F-220ENST00000434407 CRELD2Q6UXH1 353 aaPredicted RBP20.01■□□□□ 0.79
HLA-F-220ENST00000434407 TMC7Q7Z402 723 aa20.01■□□□□ 0.79
HLA-F-220ENST00000434407 SYCP3Q8IZU3 236 aa20.01■□□□□ 0.79
HLA-F-220ENST00000434407 MRPL43Q8N983 215 aaKnown RBP20.01■□□□□ 0.79
HLA-F-220ENST00000434407 PPP2R3CQ969Q6 453 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms