RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 DRGXA6NNA5 263 aa6.46□□□□□ -1.38
PTPN4-204ENST00000431283 CXorf49A8MYA2 514 aaPredicted RBP6.46□□□□□ -1.38
PTPN4-204ENST00000431283 KIAA0355O15063 1070 aa6.46□□□□□ -1.38
PTPN4-204ENST00000431283 FOSP01100 380 aaPredicted RBP6.46□□□□□ -1.38
PTPN4-204ENST00000431283 RAP2AP10114 183 aa6.46□□□□□ -1.38
PTPN4-204ENST00000431283 IL2RBP14784 551 aa6.46□□□□□ -1.38
PTPN4-204ENST00000431283 FAM102AQ5T9C2 384 aaPredicted RBP6.46□□□□□ -1.38
PTPN4-204ENST00000431283 THNSL2Q86YJ6 484 aa6.46□□□□□ -1.38
PTPN4-204ENST00000431283 DRC7Q8IY82 874 aa6.46□□□□□ -1.38
PTPN4-204ENST00000431283 TRMT2AQ8IZ69 625 aaKnown RBP6.46□□□□□ -1.38
PTPN4-204ENST00000431283 OR56A1Q8NGH5 318 aa6.46□□□□□ -1.38
PTPN4-204ENST00000431283 SLC35B2Q8TB61 432 aa6.46□□□□□ -1.38
PTPN4-204ENST00000431283 ADI1Q9BV57 179 aa6.46□□□□□ -1.38
PTPN4-204ENST00000431283 SENP6Q9GZR1 1112 aaPredicted RBP6.46□□□□□ -1.38
PTPN4-204ENST00000431283 IFT122Q9HBG6 1241 aa6.46□□□□□ -1.38
PTPN4-204ENST00000431283 COL4A3Q01955 1670 aa6.45□□□□□ -1.38
PTPN4-204ENST00000431283 CDKL5O76039 1030 aa6.45□□□□□ -1.38
PTPN4-204ENST00000431283 CLSTN1O94985 981 aa6.45□□□□□ -1.38
PTPN4-204ENST00000431283 ITGAMP11215 1152 aa6.45□□□□□ -1.38
PTPN4-204ENST00000431283 SCAND1P57086 179 aa6.45□□□□□ -1.38
PTPN4-204ENST00000431283 SP140Q13342 867 aa6.45□□□□□ -1.38
PTPN4-204ENST00000431283 TP53BP2Q13625 1128 aa6.45□□□□□ -1.38
PTPN4-204ENST00000431283 CSRP2Q16527 193 aa6.45□□□□□ -1.38
PTPN4-204ENST00000431283 TSHZ3Q63HK5 1081 aa6.45□□□□□ -1.38
PTPN4-204ENST00000431283 MED25Q71SY5 747 aa6.45□□□□□ -1.38
PTPN4-204ENST00000431283 ZNF572Q7Z3I7 529 aaPredicted RBP6.45□□□□□ -1.38
PTPN4-204ENST00000431283 ADGRG3Q86Y34 549 aa6.45□□□□□ -1.38
PTPN4-204ENST00000431283 RHOT2Q8IXI1 618 aa6.45□□□□□ -1.38
PTPN4-204ENST00000431283 PQLC1Q8N2U9 271 aa6.45□□□□□ -1.38
PTPN4-204ENST00000431283 GREM2Q9H772 168 aa6.45□□□□□ -1.38
PTPN4-204ENST00000431283 LANCL2Q9NS86 450 aa6.45□□□□□ -1.38
PTPN4-204ENST00000431283 RBM12Q9NTZ6 932 aaKnown RBP6.45□□□□□ -1.38
PTPN4-204ENST00000431283 USP35Q9P2H5 1018 aa6.45□□□□□ -1.38
PTPN4-204ENST00000431283 TMA7Q9Y2S6 64 aaKnown RBP6.45□□□□□ -1.38
PTPN4-204ENST00000431283 TBX22Q9Y458 520 aa6.45□□□□□ -1.38
PTPN4-204ENST00000431283 CUX2O14529 1486 aa6.45□□□□□ -1.38
PTPN4-204ENST00000431283 ATP5JP18859 108 aa6.44□□□□□ -1.38
PTPN4-204ENST00000431283 MRPS21P82921 87 aaKnown RBP6.44□□□□□ -1.38
PTPN4-204ENST00000431283 ADRM1Q16186 407 aa6.44□□□□□ -1.38
PTPN4-204ENST00000431283 MUM1Q2TAK8 710 aa6.44□□□□□ -1.38
PTPN4-204ENST00000431283 AGAP9Q5VTM2 703 aa6.44□□□□□ -1.38
PTPN4-204ENST00000431283 FBXO18Q8NFZ0 1043 aa6.44□□□□□ -1.38
PTPN4-204ENST00000431283 MRI1Q9BV20 369 aa6.44□□□□□ -1.38
PTPN4-204ENST00000431283 RNPEPQ9H4A4 650 aa6.44□□□□□ -1.38
PTPN4-204ENST00000431283 TMEM140Q9NV12 185 aa6.44□□□□□ -1.38
PTPN4-204ENST00000431283 NCAPD3P42695 1498 aa6.43□□□□□ -1.38
PTPN4-204ENST00000431283 TEX33O43247 280 aa6.43□□□□□ -1.38
PTPN4-204ENST00000431283 SPDEFO95238 335 aa6.43□□□□□ -1.38
PTPN4-204ENST00000431283 POMCP01189 267 aa6.43□□□□□ -1.38
PTPN4-204ENST00000431283 CFIP05156 583 aa6.43□□□□□ -1.38
PTPN4-204ENST00000431283 CXCR5P32302 372 aa6.43□□□□□ -1.38
PTPN4-204ENST00000431283 SLC5A3P53794 718 aa6.43□□□□□ -1.38
PTPN4-204ENST00000431283 SEC24CP53992 1094 aa6.43□□□□□ -1.38
PTPN4-204ENST00000431283 TMPRSS15P98073 1019 aa6.43□□□□□ -1.38
PTPN4-204ENST00000431283 ANO4Q32M45 955 aa6.43□□□□□ -1.38
PTPN4-204ENST00000431283 AFMIDQ63HM1 303 aa6.43□□□□□ -1.38
PTPN4-204ENST00000431283 FOXR2Q6PJQ5 311 aa6.43□□□□□ -1.38
PTPN4-204ENST00000431283 STRA8Q7Z7C7 330 aa6.43□□□□□ -1.38
PTPN4-204ENST00000431283 MAPKAPK5Q8IW41 473 aa6.43□□□□□ -1.38
PTPN4-204ENST00000431283 TSPEARQ8WU66 669 aa6.43□□□□□ -1.38
PTPN4-204ENST00000431283 SLC9A6Q92581 669 aa6.43□□□□□ -1.38
PTPN4-204ENST00000431283 FUBP3Q96I24 572 aaKnown RBP eCLIP6.43□□□□□ -1.38
PTPN4-204ENST00000431283 INSL6Q9Y581 213 aa6.43□□□□□ -1.38
PTPN4-204ENST00000431283 TLDC2A0PJX2 215 aa6.42□□□□□ -1.38
PTPN4-204ENST00000431283 ENDOD1O94919 500 aa6.42□□□□□ -1.38
PTPN4-204ENST00000431283 ALOX15P16050 662 aaPredicted RBP6.42□□□□□ -1.38
PTPN4-204ENST00000431283 CD38P28907 300 aa6.42□□□□□ -1.38
PTPN4-204ENST00000431283 CNGA1P29973 690 aa6.42□□□□□ -1.38
PTPN4-204ENST00000431283 MPP3Q13368 585 aa6.42□□□□□ -1.38
PTPN4-204ENST00000431283 NOMO1Q15155 1222 aa6.42□□□□□ -1.38
PTPN4-204ENST00000431283 TOR2AQ5JU69 321 aa6.42□□□□□ -1.38
PTPN4-204ENST00000431283 Q6ZVL8 140 aa6.42□□□□□ -1.38
PTPN4-204ENST00000431283 LMBR1Q8WVP7 490 aa6.42□□□□□ -1.38
PTPN4-204ENST00000431283 LINC00476Q8WZB0 136 aa6.42□□□□□ -1.38
PTPN4-204ENST00000431283 RNF31Q96EP0 1072 aa6.42□□□□□ -1.38
PTPN4-204ENST00000431283 AHCYL2Q96HN2 611 aaKnown RBP6.42□□□□□ -1.38
PTPN4-204ENST00000431283 ADAM2Q99965 735 aa6.42□□□□□ -1.38
PTPN4-204ENST00000431283 ALOXE3Q9BYJ1 711 aa6.42□□□□□ -1.38
PTPN4-204ENST00000431283 DNAJC28Q9NX36 388 aa6.42□□□□□ -1.38
PTPN4-204ENST00000431283 SYBUQ9NX95 663 aa6.42□□□□□ -1.38
PTPN4-204ENST00000431283 DKK2Q9UBU2 259 aa6.42□□□□□ -1.38
PTPN4-204ENST00000431283 EPN1Q9Y6I3 576 aaPredicted RBP6.42□□□□□ -1.38
PTPN4-204ENST00000431283 MASP2O00187 686 aa6.41□□□□□ -1.38
PTPN4-204ENST00000431283 FDXRP22570 491 aa6.41□□□□□ -1.38
PTPN4-204ENST00000431283 HSD3B2P26439 372 aa6.41□□□□□ -1.38
PTPN4-204ENST00000431283 SREBF1P36956 1147 aa6.41□□□□□ -1.38
PTPN4-204ENST00000431283 STAT4Q14765 748 aa6.41□□□□□ -1.38
PTPN4-204ENST00000431283 CCDC142Q17RM4 750 aa6.41□□□□□ -1.38
PTPN4-204ENST00000431283 PRIMA1Q86XR5 153 aa6.41□□□□□ -1.38
PTPN4-204ENST00000431283 SLC44A3Q8N4M1 653 aa6.41□□□□□ -1.38
PTPN4-204ENST00000431283 STON2Q8WXE9 905 aa6.41□□□□□ -1.38
PTPN4-204ENST00000431283 ASB10Q8WXI3 467 aa6.41□□□□□ -1.38
PTPN4-204ENST00000431283 NELL1Q92832 810 aa6.41□□□□□ -1.38
PTPN4-204ENST00000431283 ZNF764Q96H86 408 aaPredicted RBP6.41□□□□□ -1.38
PTPN4-204ENST00000431283 RSAD1Q9HA92 442 aa6.41□□□□□ -1.38
PTPN4-204ENST00000431283 KLHL11Q9NVR0 708 aa6.41□□□□□ -1.38
PTPN4-204ENST00000431283 TBCCD1Q9NVR7 557 aa6.41□□□□□ -1.38
PTPN4-204ENST00000431283 C14orf119Q9NWQ9 140 aa6.41□□□□□ -1.38
PTPN4-204ENST00000431283 A0A1B0GTW7 788 aa6.4□□□□□ -1.38
PTPN4-204ENST00000431283 MARCH11A6NNE9 402 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms