RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 C10orf67Q8IYJ2 551 aa12.16□□□□□ -0.46
SMPD4-205ENST00000431183 SAMD3Q8N6K7 520 aa12.16□□□□□ -0.46
SMPD4-205ENST00000431183 TCP11Q8WWU5 503 aa12.16□□□□□ -0.46
SMPD4-205ENST00000431183 BAP1Q92560 729 aa12.16□□□□□ -0.46
SMPD4-205ENST00000431183 UBXN4Q92575 508 aa12.16□□□□□ -0.46
SMPD4-205ENST00000431183 LPPQ93052 612 aa12.16□□□□□ -0.46
SMPD4-205ENST00000431183 C16orf70Q9BSU1 422 aa12.16□□□□□ -0.46
SMPD4-205ENST00000431183 GPR25O00155 361 aa12.15□□□□□ -0.46
SMPD4-205ENST00000431183 ATP1A1P05023 1023 aaKnown RBP12.15□□□□□ -0.46
SMPD4-205ENST00000431183 ARF4P18085 180 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-205ENST00000431183 IFRD2Q12894 506 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-205ENST00000431183 MXD4Q14582 209 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-205ENST00000431183 NBPF20Q3BBV1 942 aa12.15□□□□□ -0.46
SMPD4-205ENST00000431183 MTHFD1LQ6UB35 978 aa12.15□□□□□ -0.46
SMPD4-205ENST00000431183 KIF12Q96FN5 646 aa12.15□□□□□ -0.46
SMPD4-205ENST00000431183 MORF4L1Q9UBU8 362 aa12.15□□□□□ -0.46
SMPD4-205ENST00000431183 RSPH14Q9UHP6 348 aa12.15□□□□□ -0.46
SMPD4-205ENST00000431183 ITGB3P05106 788 aa12.15□□□□□ -0.46
SMPD4-205ENST00000431183 NCOA4Q13772 614 aa12.15□□□□□ -0.46
SMPD4-205ENST00000431183 USP37Q86T82 979 aa12.15□□□□□ -0.46
SMPD4-205ENST00000431183 PPTC7Q8NI37 304 aa12.15□□□□□ -0.46
SMPD4-205ENST00000431183 TRMT13Q9NUP7 481 aaKnown RBP12.15□□□□□ -0.46
SMPD4-205ENST00000431183 POLIQ9UNA4 740 aa12.15□□□□□ -0.46
SMPD4-205ENST00000431183 PLAGL2Q9UPG8 496 aa12.15□□□□□ -0.46
SMPD4-205ENST00000431183 TULP2O00295 520 aa12.15□□□□□ -0.47
SMPD4-205ENST00000431183 THAP12O43422 761 aa12.15□□□□□ -0.47
SMPD4-205ENST00000431183 RFC5P40937 340 aa12.15□□□□□ -0.47
SMPD4-205ENST00000431183 CLCN6P51797 869 aa12.15□□□□□ -0.47
SMPD4-205ENST00000431183 CACNB2Q08289 660 aaPredicted RBP12.15□□□□□ -0.47
SMPD4-205ENST00000431183 MESDQ14696 234 aa12.15□□□□□ -0.47
SMPD4-205ENST00000431183 APBA2Q99767 749 aa12.15□□□□□ -0.47
SMPD4-205ENST00000431183 EIF2AQ9BY44 585 aaKnown RBP12.15□□□□□ -0.47
SMPD4-205ENST00000431183 SYNCQ9H7C4 482 aa12.15□□□□□ -0.47
SMPD4-205ENST00000431183 OSGEPQ9NPF4 335 aa12.15□□□□□ -0.47
SMPD4-205ENST00000431183 ARHGAP28Q9P2N2 729 aa12.15□□□□□ -0.47
SMPD4-205ENST00000431183 DIS3Q9Y2L1 958 aaKnown RBP12.15□□□□□ -0.47
SMPD4-205ENST00000431183 GOLGA8SH3BPF8 625 aa12.14□□□□□ -0.47
SMPD4-205ENST00000431183 FANCGO15287 622 aa12.14□□□□□ -0.47
SMPD4-205ENST00000431183 MMEP08473 750 aa12.14□□□□□ -0.47
SMPD4-205ENST00000431183 NFICP08651 508 aa12.14□□□□□ -0.47
SMPD4-205ENST00000431183 PDGFRBP09619 1106 aa12.14□□□□□ -0.47
SMPD4-205ENST00000431183 STAG3L1P0CL83 205 aa12.14□□□□□ -0.47
SMPD4-205ENST00000431183 ARL2P36404 184 aa12.14□□□□□ -0.47
SMPD4-205ENST00000431183 PSEN2P49810 448 aa12.14□□□□□ -0.47
SMPD4-205ENST00000431183 IQSEC1Q6DN90 963 aa12.14□□□□□ -0.47
SMPD4-205ENST00000431183 EHBP1Q8NDI1 1231 aa12.14□□□□□ -0.47
SMPD4-205ENST00000431183 ZNF516Q92618 1163 aa12.14□□□□□ -0.47
SMPD4-205ENST00000431183 CCDC51Q96ER9 411 aa12.14□□□□□ -0.47
SMPD4-205ENST00000431183 MS4A14Q96JA4 679 aa12.14□□□□□ -0.47
SMPD4-205ENST00000431183 TSPYL1Q9H0U9 437 aa12.14□□□□□ -0.47
SMPD4-205ENST00000431183 CREBZFQ9NS37 354 aa12.14□□□□□ -0.47
SMPD4-205ENST00000431183 AGAP1Q9UPQ3 857 aa12.14□□□□□ -0.47
SMPD4-205ENST00000431183 TIMM13Q9Y5L4 95 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-205ENST00000431183 ZBTB42B2RXF5 422 aa12.14□□□□□ -0.47
SMPD4-205ENST00000431183 ZEB2O60315 1214 aa12.14□□□□□ -0.47
SMPD4-205ENST00000431183 TOM1L1O75674 476 aa12.14□□□□□ -0.47
SMPD4-205ENST00000431183 C22orf31O95567 290 aa12.14□□□□□ -0.47
SMPD4-205ENST00000431183 SERPING1P05155 500 aa12.14□□□□□ -0.47
SMPD4-205ENST00000431183 ASGR1P07306 291 aa12.14□□□□□ -0.47
SMPD4-205ENST00000431183 TDRD10Q5VZ19 366 aaKnown RBP12.14□□□□□ -0.47
SMPD4-205ENST00000431183 DAAM2Q86T65 1068 aa12.14□□□□□ -0.47
SMPD4-205ENST00000431183 DNAJC7Q99615 494 aa12.14□□□□□ -0.47
SMPD4-205ENST00000431183 NXF3Q9H4D5 531 aaKnown RBP12.14□□□□□ -0.47
SMPD4-205ENST00000431183 SALL4Q9UJQ4 1053 aa12.14□□□□□ -0.47
SMPD4-205ENST00000431183 MRPL42Q9Y6G3 142 aaKnown RBP12.14□□□□□ -0.47
SMPD4-205ENST00000431183 M0QZ92 97 aa12.13□□□□□ -0.47
SMPD4-205ENST00000431183 EXTL3O43909 919 aa12.13□□□□□ -0.47
SMPD4-205ENST00000431183 PPP1R37O75864 691 aa12.13□□□□□ -0.47
SMPD4-205ENST00000431183 AKR1A1P14550 325 aa12.13□□□□□ -0.47
SMPD4-205ENST00000431183 ZNF211Q13398 564 aaPredicted RBP12.13□□□□□ -0.47
SMPD4-205ENST00000431183 KCNA10Q16322 511 aa12.13□□□□□ -0.47
SMPD4-205ENST00000431183 TMCO3Q6UWJ1 677 aa12.13□□□□□ -0.47
SMPD4-205ENST00000431183 TRPV1Q8NER1 839 aa12.13□□□□□ -0.47
SMPD4-205ENST00000431183 GTF3C2Q8WUA4 911 aaPredicted RBP12.13□□□□□ -0.47
SMPD4-205ENST00000431183 ZFP42Q96MM3 310 aa12.13□□□□□ -0.47
SMPD4-205ENST00000431183 ITIH6Q6UXX5 1313 aa12.13□□□□□ -0.47
SMPD4-205ENST00000431183 TACC1O75410 805 aa12.13□□□□□ -0.47
SMPD4-205ENST00000431183 PALMO75781 387 aa12.13□□□□□ -0.47
SMPD4-205ENST00000431183 GPC3P51654 580 aa12.13□□□□□ -0.47
SMPD4-205ENST00000431183 GHRHRQ02643 423 aa12.13□□□□□ -0.47
SMPD4-205ENST00000431183 HIC1Q14526 733 aa12.13□□□□□ -0.47
SMPD4-205ENST00000431183 CEP89Q96ST8 783 aa12.13□□□□□ -0.47
SMPD4-205ENST00000431183 NAA15Q9BXJ9 866 aaKnown RBP12.13□□□□□ -0.47
SMPD4-205ENST00000431183 RNF39Q9H2S5 420 aa12.13□□□□□ -0.47
SMPD4-205ENST00000431183 MEIS3P2A8K0S8 358 aa12.13□□□□□ -0.47
SMPD4-205ENST00000431183 FAM155AB1AL88 458 aaPredicted RBP12.13□□□□□ -0.47
SMPD4-205ENST00000431183 SLC16A3O15427 465 aaKnown RBP12.13□□□□□ -0.47
SMPD4-205ENST00000431183 SEC31AO94979 1220 aaKnown RBP12.13□□□□□ -0.47
SMPD4-205ENST00000431183 ATG7O95352 703 aa12.13□□□□□ -0.47
SMPD4-205ENST00000431183 TNNC2P02585 160 aa12.13□□□□□ -0.47
SMPD4-205ENST00000431183 SOX5P35711 763 aa12.13□□□□□ -0.47
SMPD4-205ENST00000431183 NUMBP49757 651 aa12.13□□□□□ -0.47
SMPD4-205ENST00000431183 NOP14P78316 857 aaKnown RBP12.13□□□□□ -0.47
SMPD4-205ENST00000431183 BMT2Q1RMZ1 405 aa12.13□□□□□ -0.47
SMPD4-205ENST00000431183 ZNF699Q32M78 642 aa12.13□□□□□ -0.47
SMPD4-205ENST00000431183 TMEM40Q8WWA1 233 aa12.13□□□□□ -0.47
SMPD4-205ENST00000431183 CTNNBL1Q8WYA6 563 aaPredicted RBP12.13□□□□□ -0.47
SMPD4-205ENST00000431183 NAPGQ99747 312 aaPredicted RBP12.13□□□□□ -0.47
SMPD4-205ENST00000431183 C11orf70Q9BRQ4 267 aa12.13□□□□□ -0.47
SMPD4-205ENST00000431183 CDT1Q9H211 546 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms