RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 HLA-DRAP01903 254 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 FGGP02679 453 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 UNGP13051 313 aaPredicted RBP15□□□□□ -0.01
HOXC4-202ENST00000430889 ACO1P21399 889 aaKnown RBP15□□□□□ -0.01
HOXC4-202ENST00000430889 PDE6CP51160 858 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 STAT5BP51692 787 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 PTENP60484 403 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 PPIL2Q13356 520 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 ZBTB41Q5SVQ8 909 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 CDCA2Q69YH5 1023 aaPredicted RBP15□□□□□ -0.01
HOXC4-202ENST00000430889 ACAD10Q6JQN1 1059 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 NCAPG2Q86XI2 1143 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 CD302Q8IX05 232 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 DEPTORQ8TB45 409 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 SEPT1Q8WYJ6 367 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 KRT35Q92764 455 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 ELMO3Q96BJ8 720 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 OTUD5Q96G74 571 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 NRBP2Q9NSY0 501 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 UVRAGQ9P2Y5 699 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 CNTN6Q9UQ52 1028 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 MGAMO43451 1857 aa15□□□□□ -0.01
HOXC4-202ENST00000430889 IGKV6-21A0A0C4DH24 114 aa14.99□□□□□ -0.01
HOXC4-202ENST00000430889 LRRIQ4A6NIV6 560 aa14.99□□□□□ -0.01
HOXC4-202ENST00000430889 K7ERI5 159 aa14.99□□□□□ -0.01
HOXC4-202ENST00000430889 GGPS1O95749 300 aa14.99□□□□□ -0.01
HOXC4-202ENST00000430889 CTNNA2P26232 953 aa14.99□□□□□ -0.01
HOXC4-202ENST00000430889 MARCKSL1P49006 195 aa14.99□□□□□ -0.01
HOXC4-202ENST00000430889 IRX3P78415 501 aaPredicted RBP14.99□□□□□ -0.01
HOXC4-202ENST00000430889 CLUL1Q15846 466 aa14.99□□□□□ -0.01
HOXC4-202ENST00000430889 FAM160B1Q5W0V3 765 aa14.99□□□□□ -0.01
HOXC4-202ENST00000430889 ANKRD13AQ8IZ07 590 aa14.99□□□□□ -0.01
HOXC4-202ENST00000430889 IFT81Q8WYA0 676 aa14.99□□□□□ -0.01
HOXC4-202ENST00000430889 ZIM3Q96PE6 472 aa14.99□□□□□ -0.01
HOXC4-202ENST00000430889 CGRRF1Q99675 332 aa14.99□□□□□ -0.01
HOXC4-202ENST00000430889 TARS2Q9BW92 718 aaKnown RBP14.99□□□□□ -0.01
HOXC4-202ENST00000430889 PLEKHA4Q9H4M7 779 aa14.99□□□□□ -0.01
HOXC4-202ENST00000430889 RBPJLQ9UBG7 517 aa14.99□□□□□ -0.01
HOXC4-202ENST00000430889 ZHX1Q9UKY1 873 aaPredicted RBP14.99□□□□□ -0.01
HOXC4-202ENST00000430889 TRPC6Q9Y210 931 aa14.99□□□□□ -0.01
HOXC4-202ENST00000430889 ABLIM1O14639 778 aa14.98□□□□□ -0.01
HOXC4-202ENST00000430889 ATMINO43313 823 aaPredicted RBP14.98□□□□□ -0.01
HOXC4-202ENST00000430889 RPS6KA5O75582 802 aa14.98□□□□□ -0.01
HOXC4-202ENST00000430889 LDHAP00338 332 aaKnown RBP14.98□□□□□ -0.01
HOXC4-202ENST00000430889 COMTP21964 271 aa14.98□□□□□ -0.01
HOXC4-202ENST00000430889 COPB2P35606 906 aa14.98□□□□□ -0.01
HOXC4-202ENST00000430889 TCF7P36402 384 aaPredicted RBP14.98□□□□□ -0.01
HOXC4-202ENST00000430889 ACOT2P49753 483 aa14.98□□□□□ -0.01
HOXC4-202ENST00000430889 MKRN4PQ13434 485 aaPredicted RBP14.98□□□□□ -0.01
HOXC4-202ENST00000430889 DRP2Q13474 957 aa14.98□□□□□ -0.01
HOXC4-202ENST00000430889 PPP2R5EQ16537 467 aa14.98□□□□□ -0.01
HOXC4-202ENST00000430889 LMBRD2Q68DH5 695 aaPredicted RBP14.98□□□□□ -0.01
HOXC4-202ENST00000430889 GPAT2Q6NUI2 795 aa14.98□□□□□ -0.01
HOXC4-202ENST00000430889 ZPBP2Q6X784 338 aa14.98□□□□□ -0.01
HOXC4-202ENST00000430889 ZNF677Q86XU0 584 aa14.98□□□□□ -0.01
HOXC4-202ENST00000430889 ZNF564Q8TBZ8 553 aaPredicted RBP14.98□□□□□ -0.01
HOXC4-202ENST00000430889 CDCA5Q96FF9 252 aa14.98□□□□□ -0.01
HOXC4-202ENST00000430889 FAM167AQ96KS9 214 aa14.98□□□□□ -0.01
HOXC4-202ENST00000430889 NAP1L3Q99457 506 aaPredicted RBP14.98□□□□□ -0.01
HOXC4-202ENST00000430889 GPR20Q99678 358 aa14.98□□□□□ -0.01
HOXC4-202ENST00000430889 NUP85Q9BW27 656 aa14.98□□□□□ -0.01
HOXC4-202ENST00000430889 WNT8AQ9H1J5 351 aa14.98□□□□□ -0.01
HOXC4-202ENST00000430889 NEUROG2Q9H2A3 272 aa14.98□□□□□ -0.01
HOXC4-202ENST00000430889 APOBEC3GQ9HC16 384 aaKnown RBP14.98□□□□□ -0.01
HOXC4-202ENST00000430889 ERVK-5Q9HDB9 667 aa14.98□□□□□ -0.01
HOXC4-202ENST00000430889 C1orf112Q9NSG2 853 aa14.98□□□□□ -0.01
HOXC4-202ENST00000430889 AMACRQ9UHK6 382 aa14.98□□□□□ -0.01
HOXC4-202ENST00000430889 PLXNA1Q9UIW2 1896 aa14.98□□□□□ -0.01
HOXC4-202ENST00000430889 FAM170AA1A519 330 aa14.97□□□□□ -0.01
HOXC4-202ENST00000430889 GOLGA8KD6RF30 607 aa14.97□□□□□ -0.01
HOXC4-202ENST00000430889 MSCO60682 206 aa14.97□□□□□ -0.01
HOXC4-202ENST00000430889 HSF2BPO75031 334 aa14.97□□□□□ -0.01
HOXC4-202ENST00000430889 CYP1A1P04798 512 aaPredicted RBP14.97□□□□□ -0.01
HOXC4-202ENST00000430889 CTNNA1P35221 906 aaKnown RBP14.97□□□□□ -0.01
HOXC4-202ENST00000430889 LY6KQ17RY6 165 aa14.97□□□□□ -0.01
HOXC4-202ENST00000430889 Q3C1V9 767 aa14.97□□□□□ -0.01
HOXC4-202ENST00000430889 CELF3Q5SZQ8 465 aaKnown RBP14.97□□□□□ -0.01
HOXC4-202ENST00000430889 CCDC62Q6P9F0 684 aa14.97□□□□□ -0.01
HOXC4-202ENST00000430889 MOB2Q70IA6 237 aa14.97□□□□□ -0.01
HOXC4-202ENST00000430889 MAATS1Q7Z4T9 603 aa14.97□□□□□ -0.01
HOXC4-202ENST00000430889 CPNE8Q86YQ8 564 aa14.97□□□□□ -0.01
HOXC4-202ENST00000430889 ZDHHC14Q8IZN3 488 aa14.97□□□□□ -0.01
HOXC4-202ENST00000430889 UBR7Q8N806 425 aa14.97□□□□□ -0.01
HOXC4-202ENST00000430889 C1orf131Q8NDD1 294 aaKnown RBP14.97□□□□□ -0.01
HOXC4-202ENST00000430889 CCDC26Q8TAB7 109 aa14.97□□□□□ -0.01
HOXC4-202ENST00000430889 ATP8B4Q8TF62 1192 aa14.97□□□□□ -0.01
HOXC4-202ENST00000430889 ZNF653Q96CK0 615 aa14.97□□□□□ -0.01
HOXC4-202ENST00000430889 L3MBTL3Q96JM7 780 aaPredicted RBP14.97□□□□□ -0.01
HOXC4-202ENST00000430889 PAGR1Q9BTK6 254 aa14.97□□□□□ -0.01
HOXC4-202ENST00000430889 AVENQ9NQS1 362 aaPredicted RBP14.97□□□□□ -0.01
HOXC4-202ENST00000430889 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.97□□□□□ -0.01
HOXC4-202ENST00000430889 RBAKQ9NYW8 714 aaPredicted RBP14.97□□□□□ -0.01
HOXC4-202ENST00000430889 RNF181Q9P0P0 153 aa14.97□□□□□ -0.01
HOXC4-202ENST00000430889 CHORDC1Q9UHD1 332 aaPredicted RBP14.97□□□□□ -0.01
HOXC4-202ENST00000430889 TTLL13PA6NNM8 815 aa14.97□□□□□ -0.01
HOXC4-202ENST00000430889 TTI1O43156 1089 aa14.97□□□□□ -0.01
HOXC4-202ENST00000430889 OPA1O60313 960 aa14.97□□□□□ -0.01
HOXC4-202ENST00000430889 SHOX2O60902 331 aaPredicted RBP14.97□□□□□ -0.01
HOXC4-202ENST00000430889 CALCAP01258 141 aa14.97□□□□□ -0.01
HOXC4-202ENST00000430889 LMAN1P49257 510 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms