RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 TBC1D4O60343 1298 aa8.75□□□□□ -1.01
ECHDC1-207ENST00000430841 ZNF623O75123 536 aa8.75□□□□□ -1.01
ECHDC1-207ENST00000430841 GSPT1P15170 499 aaKnown RBP8.75□□□□□ -1.01
ECHDC1-207ENST00000430841 KCNA1Q09470 495 aa8.75□□□□□ -1.01
ECHDC1-207ENST00000430841 SNW1Q13573 536 aaKnown RBP8.75□□□□□ -1.01
ECHDC1-207ENST00000430841 HTR4Q13639 388 aa8.75□□□□□ -1.01
ECHDC1-207ENST00000430841 USP41Q3LFD5 358 aa8.75□□□□□ -1.01
ECHDC1-207ENST00000430841 PPM1LQ5SGD2 360 aa8.75□□□□□ -1.01
ECHDC1-207ENST00000430841 PRR23BQ6ZRT6 265 aa8.75□□□□□ -1.01
ECHDC1-207ENST00000430841 ZNF280BQ86YH2 543 aa8.75□□□□□ -1.01
ECHDC1-207ENST00000430841 LINC01465Q8N7H1 131 aa8.75□□□□□ -1.01
ECHDC1-207ENST00000430841 EXOC6Q8TAG9 804 aa8.75□□□□□ -1.01
ECHDC1-207ENST00000430841 TCP11Q8WWU5 503 aa8.75□□□□□ -1.01
ECHDC1-207ENST00000430841 NELL2Q99435 816 aa8.75□□□□□ -1.01
ECHDC1-207ENST00000430841 RIT2Q99578 217 aa8.75□□□□□ -1.01
ECHDC1-207ENST00000430841 CDH7Q9ULB5 785 aa8.75□□□□□ -1.01
ECHDC1-207ENST00000430841 COL4A3BPQ9Y5P4 624 aa8.75□□□□□ -1.01
ECHDC1-207ENST00000430841 DCHS1Q96JQ0 3298 aa8.75□□□□□ -1.01
ECHDC1-207ENST00000430841 SF3B1O75533 1304 aaKnown RBP eCLIP8.75□□□□□ -1.018e-6■■■■■ 107
ECHDC1-207ENST00000430841 CHD8Q9HCK8 2581 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 ESYT2A0FGR8 921 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 DCDC2BA2VCK2 349 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 ZNF862O60290 1169 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 N4BP1O75113 896 aaKnown RBP8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 TADA2AO75478 443 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 SRGAP2CP0DJJ0 459 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 MLH1P40692 756 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 ATXN1P54253 815 aaKnown RBP8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 WNT7BP56706 349 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 STARD6P59095 220 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 TFDP1Q14186 410 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 KRT32Q14532 448 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 UGCGQ16739 394 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 PFKFB3Q16875 520 aaPredicted RBP8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 CREB3L3Q68CJ9 461 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 IL31Q6EBC2 164 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 PPP4R3AQ6IN85 833 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 NOTUMQ6P988 496 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 PDXDC1Q6P996 788 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 RSPO2Q6UXX9 243 aaPredicted RBP8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 ZNF852Q6ZMS4 543 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 TPRG1Q6ZUI0 275 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 SRGAP1Q7Z6B7 1085 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 NETO1Q8TDF5 533 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 DDX1Q92499 740 aaKnown RBP8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 CCDC51Q96ER9 411 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 FAM126AQ9BYI3 521 aaPredicted RBP8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 OSBPL6Q9BZF3 934 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 NT5C3AQ9H0P0 336 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 UNC45AQ9H3U1 944 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 FANCMQ8IYD8 2048 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 MYH15Q9Y2K3 1946 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 DMDP11532 3685 aa8.74□□□□□ -1.01
ECHDC1-207ENST00000430841 KMT2BQ9UMN6 2715 aaPredicted RBP8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 MEIS3P2A8K0S8 358 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 TGM5O43548 720 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 FOXD2O60548 495 aaPredicted RBP8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 DDHD2O94830 711 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 C1RP00736 705 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 IGHDP01880 384 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 HMGB1P09429 215 aaKnown RBP8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 HNRNPA1P09651 372 aaKnown RBP eCLIP8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 AXLP30530 894 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 SOX11P35716 441 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 SCNN1GP51170 649 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 NLRP5P59047 1200 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 PSMC5P62195 406 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 GPC5P78333 572 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 DSG1Q02413 1049 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 PCBP1Q15365 356 aaKnown RBP eCLIP8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 SLC44A4Q53GD3 710 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 PPM1JQ5JR12 505 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 LAIR1Q6GTX8 287 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 FUT10Q6P4F1 479 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 AGMOQ6ZNB7 445 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 OTUD6AQ7L8S5 288 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 GRASPQ7Z6J2 395 aaPredicted RBP8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 CEP57Q86XR8 500 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 TRIM22Q8IYM9 498 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 SUMF1Q8NBK3 374 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 FAM200AQ8TCP9 573 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 CEP170P1Q96L14 293 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 VN1R3Q9BXE9 311 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 ZMYND12Q9H0C1 365 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 EPC1Q9H2F5 836 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 LTB4R2Q9NPC1 389 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 ADAM28Q9UKQ2 775 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 PPME1Q9Y570 386 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 TDRD15B5MCY1 1934 aaKnown RBP8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 WDR81Q562E7 1941 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 MAP1BP46821 2468 aaKnown RBP8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 PATJQ8NI35 1801 aa8.73□□□□□ -1.01
ECHDC1-207ENST00000430841 ARL5CA6NH57 179 aa8.72□□□□□ -1.01
ECHDC1-207ENST00000430841 ANHXE9PGG2 379 aa8.72□□□□□ -1.01
ECHDC1-207ENST00000430841 INO80B-WBP1J3KQ70 363 aa8.72□□□□□ -1.01
ECHDC1-207ENST00000430841 MSH4O15457 936 aa8.72□□□□□ -1.01
ECHDC1-207ENST00000430841 LRRN2O75325 713 aa8.72□□□□□ -1.01
ECHDC1-207ENST00000430841 MAFO75444 373 aaPredicted RBP8.72□□□□□ -1.01
ECHDC1-207ENST00000430841 C8AP07357 584 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms