RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 TDRD10Q5VZ19 366 aaKnown RBP9.63□□□□□ -0.87
SMC6-204ENST00000428868 IQCEQ6IPM2 695 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 TRIM65Q6PJ69 517 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 WDR59Q6PJI9 974 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 GBP6Q6ZN66 633 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 C15orf39Q6ZRI6 1047 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 RPAINQ86UA6 219 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 PPFIBP1Q86W92 1011 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 FAM126BQ8IXS8 530 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 NME8Q8N427 588 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 CCDC150Q8NCX0 1101 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 NEK11Q8NG66 645 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 TAS1R2Q8TE23 839 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 U2AF1L4Q8WU68 220 aaKnown RBP9.63□□□□□ -0.87
SMC6-204ENST00000428868 KAT5Q92993 513 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 ARMC5Q96C12 935 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 TRIM44Q96DX7 344 aaPredicted RBP9.63□□□□□ -0.87
SMC6-204ENST00000428868 FAM212AQ96EL1 285 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 CGRRF1Q99675 332 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 TMX1Q9H3N1 280 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 NXF3Q9H4D5 531 aaKnown RBP9.63□□□□□ -0.87
SMC6-204ENST00000428868 ABHD10Q9NUJ1 306 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 CAPN11Q9UMQ6 739 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 HES2Q9Y543 173 aa9.63□□□□□ -0.87
SMC6-204ENST00000428868 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.63□□□□□ -0.871e-11■■□□□ 14
SMC6-204ENST00000428868 MKI67P46013 3256 aaKnown RBP9.63□□□□□ -0.87
SMC6-204ENST00000428868 LRRC53A6NM62 1247 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 LACTBL1A8MY62 500 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 SGPL1O95470 568 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 C4BPAP04003 597 aaKnown RBP9.62□□□□□ -0.87
SMC6-204ENST00000428868 NFICP08651 508 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 CKBP12277 381 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 TNNI1P19237 187 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 TRIM21P19474 475 aaKnown RBP9.62□□□□□ -0.87
SMC6-204ENST00000428868 CD52P31358 61 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 KRT9P35527 623 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 GUCY2FP51841 1108 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 CLDN10P78369 228 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 LPIN1Q14693 890 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 MTF1Q14872 753 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 SLC10A6Q3KNW5 377 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 HS1BP3Q53T59 392 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 FIGNQ5HY92 759 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 PHLDB3Q6NSJ2 640 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 PDXDC1Q6P996 788 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 SLC27A1Q6PCB7 646 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 SV2AQ7L0J3 742 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 EHBP1Q8NDI1 1231 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 CHP1Q99653 195 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 PI4K2AQ9BTU6 479 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 APOL6Q9BWW8 343 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 NAA15Q9BXJ9 866 aaKnown RBP9.62□□□□□ -0.87
SMC6-204ENST00000428868 MTMR12Q9C0I1 747 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 RNF39Q9H2S5 420 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 KIAA1586Q9HCI6 787 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 TMEM8AQ9HCN3 771 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 ERVK-5Q9HDB9 667 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 SNTG2Q9NY99 539 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 ST3GAL5Q9UNP4 418 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 NOD1Q9Y239 953 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 ZKSCAN5Q9Y2L8 839 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 VWA8A3KMH1 1905 aa9.62□□□□□ -0.87
SMC6-204ENST00000428868 TTC3P53804 2025 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 MROH7Q68CQ1 1323 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 A0A1W2PQJ5 194 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 GTPBP10A4D1E9 387 aaKnown RBP9.61□□□□□ -0.87
SMC6-204ENST00000428868 SOWAHDA6NJG2 315 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 MEIS3P2A8K0S8 358 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 M0QZ92 97 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 RPS6KA5O75582 802 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 CD4P01730 458 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 HLA-DRAP01903 254 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 TFRCP02786 760 aaKnown RBP9.61□□□□□ -0.87
SMC6-204ENST00000428868 PLEKP08567 350 aaPredicted RBP9.61□□□□□ -0.87
SMC6-204ENST00000428868 FECHP22830 423 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 AKAP5P24588 427 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 GRM5P41594 1212 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 JAM2P57087 298 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 CDC42EP1Q00587 391 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 TRIM14Q14142 442 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 GPNMBQ14956 572 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 TCTN1Q2MV58 587 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 DCAF4L1Q3SXM0 396 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 ZACNQ401N2 412 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 FAM26DQ5JW98 314 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 KRT39Q6A163 491 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 JADE1Q6IE81 842 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 SPOPLQ6IQ16 392 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 NOTUMQ6P988 496 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 RAD9BQ6WBX8 426 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 RRAGAQ7L523 313 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 RSPH3Q86UC2 560 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 SMG8Q8ND04 991 aaKnown RBP9.61□□□□□ -0.87
SMC6-204ENST00000428868 LINC01599Q8WXQ3 324 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 TATDN2Q93075 761 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 ZMAT2Q96NC0 199 aaKnown RBP9.61□□□□□ -0.87
SMC6-204ENST00000428868 FNBP1Q96RU3 617 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 DNAJC7Q99615 494 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 GPR88Q9GZN0 384 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 RPF1Q9H9Y2 349 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms