RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 ZC3H11AO75152 810 aaKnown RBP eCLIP24.31■■□□□ 1.48
PTPN18-205ENST00000428843 ANK1P16157 1881 aa24.31■■□□□ 1.48
PTPN18-205ENST00000428843 PRCPP42785 496 aa24.31■■□□□ 1.48
PTPN18-205ENST00000428843 MORC3Q14149 939 aa24.31■■□□□ 1.48
PTPN18-205ENST00000428843 COBLL1Q53SF7 1204 aa24.31■■□□□ 1.48
PTPN18-205ENST00000428843 GLRA4Q5JXX5 417 aa24.31■■□□□ 1.48
PTPN18-205ENST00000428843 FBXO22Q8NEZ5 403 aa24.31■■□□□ 1.48
PTPN18-205ENST00000428843 PLEKHA5Q9HAU0 1116 aa24.31■■□□□ 1.48
PTPN18-205ENST00000428843 AAASQ9NRG9 546 aa24.31■■□□□ 1.48
PTPN18-205ENST00000428843 HSPBP1Q9NZL4 362 aa24.31■■□□□ 1.48
PTPN18-205ENST00000428843 CNTN3Q9P232 1028 aa24.31■■□□□ 1.48
PTPN18-205ENST00000428843 DNAJB4Q9UDY4 337 aa24.31■■□□□ 1.48
PTPN18-205ENST00000428843 TTC26A0AVF1 554 aa24.3■■□□□ 1.48
PTPN18-205ENST00000428843 C5orf67F2Z3F1 127 aa24.3■■□□□ 1.48
PTPN18-205ENST00000428843 KIAA0391O15091 583 aaKnown RBP24.3■■□□□ 1.48
PTPN18-205ENST00000428843 LDHAP00338 332 aaKnown RBP24.3■■□□□ 1.48
PTPN18-205ENST00000428843 THP07101 528 aa24.3■■□□□ 1.48
PTPN18-205ENST00000428843 BMP6P22004 513 aa24.3■■□□□ 1.48
PTPN18-205ENST00000428843 PBX3P40426 434 aa24.3■■□□□ 1.48
PTPN18-205ENST00000428843 BCAR1P56945 870 aa24.3■■□□□ 1.48
PTPN18-205ENST00000428843 DSC1Q08554 894 aa24.3■■□□□ 1.48
PTPN18-205ENST00000428843 GRIN2CQ14957 1233 aa24.3■■□□□ 1.48
PTPN18-205ENST00000428843 KCNT2Q6UVM3 1135 aa24.3■■□□□ 1.48
PTPN18-205ENST00000428843 C12orf56Q8IXR9 622 aa24.3■■□□□ 1.48
PTPN18-205ENST00000428843 GOLGA5Q8TBA6 731 aa24.3■■□□□ 1.48
PTPN18-205ENST00000428843 NOC3LQ8WTT2 800 aaKnown RBP24.3■■□□□ 1.48
PTPN18-205ENST00000428843 ZNF558Q96NG5 402 aa24.3■■□□□ 1.48
PTPN18-205ENST00000428843 PCDHB12Q9Y5F1 795 aa24.3■■□□□ 1.48
PTPN18-205ENST00000428843 SMIM28A0A1B0GU29 152 aa24.29■■□□□ 1.48
PTPN18-205ENST00000428843 LACTBL1A8MY62 500 aa24.29■■□□□ 1.48
PTPN18-205ENST00000428843 PDXKO00764 312 aa24.29■■□□□ 1.48
PTPN18-205ENST00000428843 EXTL3O43909 919 aa24.29■■□□□ 1.48
PTPN18-205ENST00000428843 KCNE1P15382 129 aa24.29■■□□□ 1.48
PTPN18-205ENST00000428843 CYP2J2P51589 502 aa24.29■■□□□ 1.48
PTPN18-205ENST00000428843 NAB2Q15742 525 aa24.29■■□□□ 1.48
PTPN18-205ENST00000428843 COLGALT2Q8IYK4 626 aa24.29■■□□□ 1.48
PTPN18-205ENST00000428843 GPD1LQ8N335 351 aa24.29■■□□□ 1.48
PTPN18-205ENST00000428843 DEFB123Q8N688 67 aa24.29■■□□□ 1.48
PTPN18-205ENST00000428843 FAM212AQ96EL1 285 aa24.29■■□□□ 1.48
PTPN18-205ENST00000428843 ZMAT2Q96NC0 199 aaKnown RBP24.29■■□□□ 1.48
PTPN18-205ENST00000428843 PPP1R10Q96QC0 940 aaKnown RBP24.29■■□□□ 1.48
PTPN18-205ENST00000428843 PLVAPQ9BX97 442 aa24.29■■□□□ 1.48
PTPN18-205ENST00000428843 COL4A4P53420 1690 aaPredicted RBP24.29■■□□□ 1.48
PTPN18-205ENST00000428843 RFXAPO00287 272 aa24.28■■□□□ 1.48
PTPN18-205ENST00000428843 RB1P06400 928 aa24.28■■□□□ 1.48
PTPN18-205ENST00000428843 ADRB2P07550 413 aa24.28■■□□□ 1.48
PTPN18-205ENST00000428843 GALTP07902 379 aa24.28■■□□□ 1.48
PTPN18-205ENST00000428843 SLC11A1P49279 550 aa24.28■■□□□ 1.48
PTPN18-205ENST00000428843 POU5F1Q01860 360 aaKnown RBP24.28■■□□□ 1.48
PTPN18-205ENST00000428843 PPP2R3AQ06190 1150 aa24.28■■□□□ 1.48
PTPN18-205ENST00000428843 ADSSL1Q8N142 457 aa24.28■■□□□ 1.48
PTPN18-205ENST00000428843 TRIML1Q8N9V2 468 aa24.28■■□□□ 1.48
PTPN18-205ENST00000428843 TMEM175Q9BSA9 504 aa24.28■■□□□ 1.48
PTPN18-205ENST00000428843 PRDM12Q9H4Q4 367 aa24.28■■□□□ 1.48
PTPN18-205ENST00000428843 TRAF3IP3Q9Y228 551 aa24.28■■□□□ 1.48
PTPN18-205ENST00000428843 PLXNA4Q9HCM2 1894 aa24.28■■□□□ 1.48
PTPN18-205ENST00000428843 MYO9BQ13459 2157 aa24.27■■□□□ 1.48
PTPN18-205ENST00000428843 NT5C1B-RDH14C9J2C7 533 aa24.27■■□□□ 1.48
PTPN18-205ENST00000428843 CALUO43852 315 aaPredicted RBP24.27■■□□□ 1.48
PTPN18-205ENST00000428843 ALDH7A1P49419 539 aaKnown RBP24.27■■□□□ 1.48
PTPN18-205ENST00000428843 SPAG1Q07617 926 aa24.27■■□□□ 1.48
PTPN18-205ENST00000428843 KLHL23Q8NBE8 558 aa24.27■■□□□ 1.48
PTPN18-205ENST00000428843 GDPD5Q8WTR4 605 aa24.27■■□□□ 1.48
PTPN18-205ENST00000428843 P2RX5Q93086 422 aa24.27■■□□□ 1.48
PTPN18-205ENST00000428843 DMAC2Q9NW81 257 aa24.27■■□□□ 1.48
PTPN18-205ENST00000428843 CACNG4Q9UBN1 327 aa24.27■■□□□ 1.48
PTPN18-205ENST00000428843 H3BNC9 293 aa24.26■■□□□ 1.47
PTPN18-205ENST00000428843 CD44P16070 742 aaKnown RBP24.26■■□□□ 1.47
PTPN18-205ENST00000428843 OR1G1P47890 313 aa24.26■■□□□ 1.47
PTPN18-205ENST00000428843 TUSC3Q13454 348 aa24.26■■□□□ 1.47
PTPN18-205ENST00000428843 GPM6BQ13491 265 aa24.26■■□□□ 1.47
PTPN18-205ENST00000428843 ZCWPW2Q504Y3 356 aa24.26■■□□□ 1.47
PTPN18-205ENST00000428843 CBWD2Q8IUF1 395 aa24.26■■□□□ 1.47
PTPN18-205ENST00000428843 SLC9A9Q8IVB4 645 aa24.26■■□□□ 1.47
PTPN18-205ENST00000428843 BRSK2Q8IWQ3 736 aa24.26■■□□□ 1.47
PTPN18-205ENST00000428843 CD302Q8IX05 232 aa24.26■■□□□ 1.47
PTPN18-205ENST00000428843 SLC39A11Q8N1S5 342 aa24.26■■□□□ 1.47
PTPN18-205ENST00000428843 XXYLT1Q8NBI6 393 aa24.26■■□□□ 1.47
PTPN18-205ENST00000428843 KIF12Q96FN5 646 aa24.26■■□□□ 1.47
PTPN18-205ENST00000428843 FBXL18Q96ME1 805 aa24.26■■□□□ 1.47
PTPN18-205ENST00000428843 C11orf84Q9BUA3 381 aaPredicted RBP24.26■■□□□ 1.47
PTPN18-205ENST00000428843 KIAA1586Q9HCI6 787 aa24.26■■□□□ 1.47
PTPN18-205ENST00000428843 RBAKQ9NYW8 714 aaPredicted RBP24.26■■□□□ 1.47
PTPN18-205ENST00000428843 SPG21Q9NZD8 308 aa24.26■■□□□ 1.47
PTPN18-205ENST00000428843 FAN1Q9Y2M0 1017 aa24.26■■□□□ 1.47
PTPN18-205ENST00000428843 CHD9Q3L8U1 2897 aa24.26■■□□□ 1.47
PTPN18-205ENST00000428843 CASTOR2A6NHX0 329 aa24.25■■□□□ 1.47
PTPN18-205ENST00000428843 ZNF233A6NK53 670 aa24.25■■□□□ 1.47
PTPN18-205ENST00000428843 NRP1O14786 923 aa24.25■■□□□ 1.47
PTPN18-205ENST00000428843 FGF18O76093 207 aa24.25■■□□□ 1.47
PTPN18-205ENST00000428843 NR3C1P04150 777 aa24.25■■□□□ 1.47
PTPN18-205ENST00000428843 ALDH2P05091 517 aa24.25■■□□□ 1.47
PTPN18-205ENST00000428843 ITGB1P05556 798 aa24.25■■□□□ 1.47
PTPN18-205ENST00000428843 PPM1AP35813 382 aa24.25■■□□□ 1.47
PTPN18-205ENST00000428843 SOX4Q06945 474 aaPredicted RBP24.25■■□□□ 1.47
PTPN18-205ENST00000428843 STIM1Q13586 685 aa24.25■■□□□ 1.47
PTPN18-205ENST00000428843 JADE1Q6IE81 842 aa24.25■■□□□ 1.47
PTPN18-205ENST00000428843 RDH13Q8NBN7 331 aa24.25■■□□□ 1.47
PTPN18-205ENST00000428843 TMEM174Q8WUU8 243 aa24.25■■□□□ 1.47
PTPN18-205ENST00000428843 C18orf25Q96B23 403 aaPredicted RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms