RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.12■□□□□ 0.33
C9orf3-206ENST00000428313 IGSF9BQ9UPX0 1349 aa17.11■□□□□ 0.33
C9orf3-206ENST00000428313 ADAMTSL3P82987 1691 aa17.11■□□□□ 0.33
C9orf3-206ENST00000428313 CCNT1O60563 726 aaKnown RBP17.11■□□□□ 0.33
C9orf3-206ENST00000428313 MAGEC1O60732 1142 aa17.11■□□□□ 0.33
C9orf3-206ENST00000428313 OPHN1O60890 802 aa17.11■□□□□ 0.33
C9orf3-206ENST00000428313 DNAJC6O75061 913 aa17.11■□□□□ 0.33
C9orf3-206ENST00000428313 SLC5A1P13866 664 aa17.11■□□□□ 0.33
C9orf3-206ENST00000428313 GRIA2P42262 883 aa17.11■□□□□ 0.33
C9orf3-206ENST00000428313 TXKP42681 527 aa17.11■□□□□ 0.33
C9orf3-206ENST00000428313 ADRM1Q16186 407 aa17.11■□□□□ 0.33
C9orf3-206ENST00000428313 CCDC80Q76M96 950 aa17.11■□□□□ 0.33
C9orf3-206ENST00000428313 OTOAQ7RTW8 1153 aa17.11■□□□□ 0.33
C9orf3-206ENST00000428313 NET1Q7Z628 596 aaPredicted RBP17.11■□□□□ 0.33
C9orf3-206ENST00000428313 FRMD5Q7Z6J6 570 aa17.11■□□□□ 0.33
C9orf3-206ENST00000428313 SCUBE1Q8IWY4 988 aa17.11■□□□□ 0.33
C9orf3-206ENST00000428313 SDR42E1Q8WUS8 393 aa17.11■□□□□ 0.33
C9orf3-206ENST00000428313 MAML1Q92585 1016 aa17.11■□□□□ 0.33
C9orf3-206ENST00000428313 ABTB1Q969K4 478 aaPredicted RBP17.11■□□□□ 0.33
C9orf3-206ENST00000428313 BRIP1Q9BX63 1249 aa17.11■□□□□ 0.33
C9orf3-206ENST00000428313 TYW1Q9NV66 732 aaKnown RBP17.11■□□□□ 0.33
C9orf3-206ENST00000428313 NINJ2Q9NZG7 142 aa17.11■□□□□ 0.33
C9orf3-206ENST00000428313 SUN2Q9UH99 717 aa17.11■□□□□ 0.33
C9orf3-206ENST00000428313 LRP5O75197 1615 aa17.11■□□□□ 0.33
C9orf3-206ENST00000428313 AP1G1O43747 822 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 TROVE2P10155 538 aaKnown RBP eCLIP17.1■□□□□ 0.333e-7■■□□□ 13.3
C9orf3-206ENST00000428313 FXR2P51116 673 aaKnown RBP eCLIP17.1■□□□□ 0.33
C9orf3-206ENST00000428313 OXCT1P55809 520 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 AP2B1P63010 937 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 DCTN2Q13561 401 aaKnown RBP17.1■□□□□ 0.33
C9orf3-206ENST00000428313 SYDE2Q5VT97 1194 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 ADGRG6Q86SQ4 1221 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 SCYL3Q8IZE3 742 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 TTC25Q96NG3 672 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 MPHOSPH6Q99547 160 aaKnown RBP17.1■□□□□ 0.33
C9orf3-206ENST00000428313 ZSWIM1Q9BR11 485 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 CORO1BQ9BR76 489 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 BRD8Q9H0E9 1235 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 GPAMQ9HCL2 828 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 SPATA7Q9P0W8 599 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 BTBD7Q9P203 1132 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 SSX2IPQ9Y2D8 614 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 KAT6BQ8WYB5 2073 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 PAPPAQ13219 1627 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 SUPT3HO75486 399 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 GAS8O95995 478 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 VARSP26640 1264 aaKnown RBP17.1■□□□□ 0.33
C9orf3-206ENST00000428313 CHKAP35790 457 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 NONOQ15233 471 aaKnown RBP eCLIP17.1■□□□□ 0.33
C9orf3-206ENST00000428313 LETM2Q2VYF4 491 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 TMEM119Q4V9L6 283 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 TRABD2AQ86V40 505 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 SATL1Q86VE3 508 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 DNAJC19Q96DA6 116 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 KCTD10Q9H3F6 313 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 GREM2Q9H772 168 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 SIX2Q9NPC8 291 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 SENP1Q9P0U3 644 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 TBK1Q9UHD2 729 aa17.1■□□□□ 0.33
C9orf3-206ENST00000428313 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.1■□□□□ 0.33
C9orf3-206ENST00000428313 BAZ2AQ9UIF9 1905 aaKnown RBP17.1■□□□□ 0.33
C9orf3-206ENST00000428313 HARSP12081 509 aaKnown RBP17.09■□□□□ 0.33
C9orf3-206ENST00000428313 STAT1P42224 750 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 EMP3P54852 163 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 XIAPP98170 497 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 ASPHQ12797 758 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 TCEAL1Q15170 157 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 EPHA7Q15375 998 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 TMEM266Q2M3C6 531 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 TRMT5Q32P41 509 aaKnown RBP17.09■□□□□ 0.33
C9orf3-206ENST00000428313 AADACL2Q6P093 401 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 RHOT2Q8IXI1 618 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 SH3RF3Q8TEJ3 882 aaPredicted RBP17.09■□□□□ 0.33
C9orf3-206ENST00000428313 FAM89AQ96GI7 184 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 ORAI2Q96SN7 254 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 LRRC19Q9H756 370 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 BARHL2Q9NY43 387 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 CLIC5Q9NZA1 410 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 ANKFY1Q9P2R3 1169 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 MROH5Q6ZUA9 1318 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 SMIM22K7EJ46 135 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 RGL2O15211 777 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 WDR46O15213 610 aaKnown RBP17.09■□□□□ 0.33
C9orf3-206ENST00000428313 CDK4P11802 303 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 MLH1P40692 756 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 MED21Q13503 144 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 RINLQ6ZS11 566 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 SYDE1Q6ZW31 735 aaPredicted RBP17.09■□□□□ 0.33
C9orf3-206ENST00000428313 NEK8Q86SG6 692 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 PDSS2Q86YH6 399 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 RELL1Q8IUW5 271 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 GAB3Q8WWW8 586 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 SNF8Q96H20 258 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 AGAP3Q96P47 875 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 TAS2R1Q9NYW7 299 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 PTPN22Q9Y2R2 807 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 ALG6Q9Y672 507 aa17.09■□□□□ 0.33
C9orf3-206ENST00000428313 MAGEB6P1A0A0J9YX57 407 aa17.08■□□□□ 0.33
C9orf3-206ENST00000428313 ABHD2P08910 425 aa17.08■□□□□ 0.33
C9orf3-206ENST00000428313 RARBP10826 455 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms