RNA–Protein interactions for RNA: ENST00000427004.5

PHF1-203, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-203ENST00000427004 HOOK1Q9UJC3 728 aaKnown RBP16.77■□□□□ 0.28
PHF1-203ENST00000427004 CPSF3Q9UKF6 684 aaKnown RBP16.77■□□□□ 0.28
PHF1-203ENST00000427004 INSL6Q9Y581 213 aa16.77■□□□□ 0.28
PHF1-203ENST00000427004 CUL9Q8IWT3 2517 aa16.77■□□□□ 0.28
PHF1-203ENST00000427004 UBE4BO95155 1302 aa16.76■□□□□ 0.27
PHF1-203ENST00000427004 PPEF2O14830 753 aa16.76■□□□□ 0.27
PHF1-203ENST00000427004 ZC3H11AO75152 810 aaKnown RBP eCLIP16.76■□□□□ 0.27
PHF1-203ENST00000427004 NFICP08651 508 aa16.76■□□□□ 0.27
PHF1-203ENST00000427004 NAB2Q15742 525 aa16.76■□□□□ 0.27
PHF1-203ENST00000427004 CCDC183Q5T5S1 534 aa16.76■□□□□ 0.27
PHF1-203ENST00000427004 JADE1Q6IE81 842 aa16.76■□□□□ 0.27
PHF1-203ENST00000427004 GLB1LQ6UWU2 654 aa16.76■□□□□ 0.27
PHF1-203ENST00000427004 C11orf57Q6ZUT1 292 aaPredicted RBP16.76■□□□□ 0.27
PHF1-203ENST00000427004 STXBP4Q6ZWJ1 553 aa16.76■□□□□ 0.27
PHF1-203ENST00000427004 EFCAB13Q8IY85 973 aa16.76■□□□□ 0.27
PHF1-203ENST00000427004 GUF1Q8N442 669 aaKnown RBP16.76■□□□□ 0.27
PHF1-203ENST00000427004 GDPD5Q8WTR4 605 aa16.76■□□□□ 0.27
PHF1-203ENST00000427004 NELFBQ8WX92 580 aa16.76■□□□□ 0.27
PHF1-203ENST00000427004 ARNTL2Q8WYA1 636 aa16.76■□□□□ 0.27
PHF1-203ENST00000427004 PGBD4Q96DM1 585 aa16.76■□□□□ 0.27
PHF1-203ENST00000427004 CCDC34Q96HJ3 373 aa16.76■□□□□ 0.27
PHF1-203ENST00000427004 POP1Q99575 1024 aaKnown RBP16.76■□□□□ 0.27
PHF1-203ENST00000427004 CCDC94Q9BW85 323 aaPredicted RBP16.76■□□□□ 0.27
PHF1-203ENST00000427004 PDE11AQ9HCR9 933 aa16.76■□□□□ 0.27
PHF1-203ENST00000427004 RMND1Q9NWS8 449 aa16.76■□□□□ 0.27
PHF1-203ENST00000427004 KCNG1Q9UIX4 513 aa16.76■□□□□ 0.27
PHF1-203ENST00000427004 MSRAQ9UJ68 235 aa16.76■□□□□ 0.27
PHF1-203ENST00000427004 PRG3Q9Y2Y8 225 aaPredicted RBP16.76■□□□□ 0.27
PHF1-203ENST00000427004 PCDHGC5Q9Y5F6 944 aa16.76■□□□□ 0.27
PHF1-203ENST00000427004 NR3C1P04150 777 aa16.75■□□□□ 0.27
PHF1-203ENST00000427004 ITGB1P05556 798 aa16.75■□□□□ 0.27
PHF1-203ENST00000427004 SLC11A1P49279 550 aa16.75■□□□□ 0.27
PHF1-203ENST00000427004 BCAR1P56945 870 aa16.75■□□□□ 0.27
PHF1-203ENST00000427004 SMAD3P84022 425 aaKnown RBP16.75■□□□□ 0.27
PHF1-203ENST00000427004 ZCWPW2Q504Y3 356 aa16.75■□□□□ 0.27
PHF1-203ENST00000427004 GPD1LQ8N335 351 aa16.75■□□□□ 0.27
PHF1-203ENST00000427004 RPS6KC1Q96S38 1066 aa16.75■□□□□ 0.27
PHF1-203ENST00000427004 GZF1Q9H116 711 aaPredicted RBP16.75■□□□□ 0.27
PHF1-203ENST00000427004 RPF1Q9H9Y2 349 aaKnown RBP16.75■□□□□ 0.27
PHF1-203ENST00000427004 COL6A3P12111 3177 aa16.75■□□□□ 0.27
PHF1-203ENST00000427004 SCN1AP35498 2009 aa16.74■□□□□ 0.27
PHF1-203ENST00000427004 CHD9Q3L8U1 2897 aa16.74■□□□□ 0.27
PHF1-203ENST00000427004 SMIM28A0A1B0GU29 152 aa16.74■□□□□ 0.27
PHF1-203ENST00000427004 CLTAP09496 248 aa16.74■□□□□ 0.27
PHF1-203ENST00000427004 SKIP12755 728 aa16.74■□□□□ 0.27
PHF1-203ENST00000427004 GARTP22102 1010 aa16.74■□□□□ 0.27
PHF1-203ENST00000427004 CTNNB1P35222 781 aa16.74■□□□□ 0.27
PHF1-203ENST00000427004 RNASELQ05823 741 aaKnown RBP16.74■□□□□ 0.27
PHF1-203ENST00000427004 GRIN2CQ14957 1233 aa16.74■□□□□ 0.27
PHF1-203ENST00000427004 HSP90AA4PQ58FG1 418 aa16.74■□□□□ 0.27
PHF1-203ENST00000427004 CEP135Q66GS9 1140 aa16.74■□□□□ 0.27
PHF1-203ENST00000427004 ALKAL1Q6UXT8 129 aa16.74■□□□□ 0.27
PHF1-203ENST00000427004 RBM43Q6ZSC3 357 aaKnown RBP16.74■□□□□ 0.27
PHF1-203ENST00000427004 CMTR2Q8IYT2 770 aaKnown RBP16.74■□□□□ 0.27
PHF1-203ENST00000427004 COLGALT1Q8NBJ5 622 aa16.74■□□□□ 0.27
PHF1-203ENST00000427004 PPP1R10Q96QC0 940 aaKnown RBP16.74■□□□□ 0.27
PHF1-203ENST00000427004 DUSP9Q99956 384 aaKnown RBP16.74■□□□□ 0.27
PHF1-203ENST00000427004 PRDM12Q9H4Q4 367 aa16.74■□□□□ 0.27
PHF1-203ENST00000427004 ALG13Q9NP73 1137 aaKnown RBP16.74■□□□□ 0.27
PHF1-203ENST00000427004 GIT1Q9Y2X7 761 aa16.74■□□□□ 0.27
PHF1-203ENST00000427004 A0A0C4DFX4 3053 aa16.74■□□□□ 0.27
PHF1-203ENST00000427004 TTC26A0AVF1 554 aa16.73■□□□□ 0.27
PHF1-203ENST00000427004 SYCE3A1L190 88 aa16.73■□□□□ 0.27
PHF1-203ENST00000427004 I3L4J1 428 aa16.73■□□□□ 0.27
PHF1-203ENST00000427004 PDXKO00764 312 aa16.73■□□□□ 0.27
PHF1-203ENST00000427004 EXTL3O43909 919 aa16.73■□□□□ 0.27
PHF1-203ENST00000427004 NR2F2P24468 414 aa16.73■□□□□ 0.27
PHF1-203ENST00000427004 OR1G1P47890 313 aa16.73■□□□□ 0.27
PHF1-203ENST00000427004 YARSP54577 528 aaKnown RBP16.73■□□□□ 0.27
PHF1-203ENST00000427004 NLRP12P59046 1061 aa16.73■□□□□ 0.27
PHF1-203ENST00000427004 DLG4P78352 724 aa16.73■□□□□ 0.27
PHF1-203ENST00000427004 RAB30Q15771 203 aa16.73■□□□□ 0.27
PHF1-203ENST00000427004 KLHL40Q2TBA0 621 aa16.73■□□□□ 0.27
PHF1-203ENST00000427004 SLFN12LQ6IEE8 588 aa16.73■□□□□ 0.27
PHF1-203ENST00000427004 COLGALT2Q8IYK4 626 aa16.73■□□□□ 0.27
PHF1-203ENST00000427004 LRRC43Q8N309 656 aa16.73■□□□□ 0.27
PHF1-203ENST00000427004 C3orf58Q8NDZ4 430 aa16.73■□□□□ 0.27
PHF1-203ENST00000427004 URGCPQ8TCY9 931 aa16.73■□□□□ 0.27
PHF1-203ENST00000427004 P2RX5Q93086 422 aa16.73■□□□□ 0.27
PHF1-203ENST00000427004 KIF12Q96FN5 646 aa16.73■□□□□ 0.27
PHF1-203ENST00000427004 B3GALT6Q96L58 329 aa16.73■□□□□ 0.27
PHF1-203ENST00000427004 ZNF576Q9H609 170 aa16.73■□□□□ 0.27
PHF1-203ENST00000427004 SLC28A3Q9HAS3 691 aa16.73■□□□□ 0.27
PHF1-203ENST00000427004 RBAKQ9NYW8 714 aaPredicted RBP16.73■□□□□ 0.27
PHF1-203ENST00000427004 VWA8A3KMH1 1905 aa16.72■□□□□ 0.27
PHF1-203ENST00000427004 CDH23Q9H251 3354 aa16.72■□□□□ 0.27
PHF1-203ENST00000427004 EXOC3O60645 756 aa16.72■□□□□ 0.27
PHF1-203ENST00000427004 AKAP3O75969 853 aa16.72■□□□□ 0.27
PHF1-203ENST00000427004 CCNE1P24864 410 aa16.72■□□□□ 0.27
PHF1-203ENST00000427004 DNAJB1P25685 340 aa16.72■□□□□ 0.27
PHF1-203ENST00000427004 PPP2R3AQ06190 1150 aa16.72■□□□□ 0.27
PHF1-203ENST00000427004 EPC2Q52LR7 807 aa16.72■□□□□ 0.27
PHF1-203ENST00000427004 HS2ST1Q7LGA3 356 aa16.72■□□□□ 0.27
PHF1-203ENST00000427004 BRSK2Q8IWQ3 736 aa16.72■□□□□ 0.27
PHF1-203ENST00000427004 KLHL23Q8NBE8 558 aa16.72■□□□□ 0.27
PHF1-203ENST00000427004 XXYLT1Q8NBI6 393 aa16.72■□□□□ 0.27
PHF1-203ENST00000427004 OR5B17Q8NGF7 314 aa16.72■□□□□ 0.27
PHF1-203ENST00000427004 CCDC127Q96BQ5 260 aa16.72■□□□□ 0.27
PHF1-203ENST00000427004 VN1R3Q9BXE9 311 aa16.72■□□□□ 0.27
PHF1-203ENST00000427004 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms