RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 CAMK4Q16566 473 aa13.68□□□□□ -0.22
SMIM12-203ENST00000426886 KANK3Q6NY19 840 aa13.68□□□□□ -0.22
SMIM12-203ENST00000426886 STXBP4Q6ZWJ1 553 aa13.68□□□□□ -0.22
SMIM12-203ENST00000426886 TMEM130Q8N3G9 435 aa13.68□□□□□ -0.22
SMIM12-203ENST00000426886 POF1BQ8WVV4 589 aa13.68□□□□□ -0.22
SMIM12-203ENST00000426886 CBWD1Q9BRT8 395 aa13.68□□□□□ -0.22
SMIM12-203ENST00000426886 GOLGA2P5Q9HBQ8 144 aa13.68□□□□□ -0.22
SMIM12-203ENST00000426886 AGO2Q9UKV8 859 aaKnown RBP13.68□□□□□ -0.22
SMIM12-203ENST00000426886 FNDC1Q4ZHG4 1894 aaPredicted RBP13.68□□□□□ -0.22
SMIM12-203ENST00000426886 CLIC2O15247 247 aa13.67□□□□□ -0.22
SMIM12-203ENST00000426886 PIGRP01833 764 aa13.67□□□□□ -0.22
SMIM12-203ENST00000426886 ABCD1P33897 745 aa13.67□□□□□ -0.22
SMIM12-203ENST00000426886 CA8P35219 290 aa13.67□□□□□ -0.22
SMIM12-203ENST00000426886 SLC10A6Q3KNW5 377 aa13.67□□□□□ -0.22
SMIM12-203ENST00000426886 SMYD4Q8IYR2 804 aaPredicted RBP13.67□□□□□ -0.22
SMIM12-203ENST00000426886 KIAA0895Q8NCT3 520 aa13.67□□□□□ -0.22
SMIM12-203ENST00000426886 HASPINQ8TF76 798 aa13.67□□□□□ -0.22
SMIM12-203ENST00000426886 ZMAT2Q96NC0 199 aaKnown RBP13.67□□□□□ -0.22
SMIM12-203ENST00000426886 TOPORSQ9NS56 1045 aaPredicted RBP13.67□□□□□ -0.22
SMIM12-203ENST00000426886 FAN1Q9Y2M0 1017 aa13.67□□□□□ -0.22
SMIM12-203ENST00000426886 PCDHGC5Q9Y5F6 944 aa13.67□□□□□ -0.22
SMIM12-203ENST00000426886 SMIM28A0A1B0GU29 152 aa13.67□□□□□ -0.22
SMIM12-203ENST00000426886 NRP1O14786 923 aa13.67□□□□□ -0.22
SMIM12-203ENST00000426886 OGTO15294 1046 aa13.67□□□□□ -0.22
SMIM12-203ENST00000426886 MEFVO15553 781 aaPredicted RBP13.67□□□□□ -0.22
SMIM12-203ENST00000426886 RB1P06400 928 aa13.67□□□□□ -0.22
SMIM12-203ENST00000426886 SCP2P22307 547 aa13.67□□□□□ -0.22
SMIM12-203ENST00000426886 SPPL3Q8TCT6 385 aa13.67□□□□□ -0.22
SMIM12-203ENST00000426886 CCDC47Q96A33 483 aaKnown RBP13.67□□□□□ -0.22
SMIM12-203ENST00000426886 HVCN1Q96D96 273 aa13.67□□□□□ -0.22
SMIM12-203ENST00000426886 FAM213AQ9BRX8 229 aa13.67□□□□□ -0.22
SMIM12-203ENST00000426886 PLVAPQ9BX97 442 aa13.67□□□□□ -0.22
SMIM12-203ENST00000426886 TMEM206Q9H813 350 aa13.67□□□□□ -0.22
SMIM12-203ENST00000426886 SPG21Q9NZD8 308 aa13.67□□□□□ -0.22
SMIM12-203ENST00000426886 PCDHA5Q9Y5H7 936 aa13.67□□□□□ -0.22
SMIM12-203ENST00000426886 MTCH2Q9Y6C9 303 aa13.67□□□□□ -0.22
SMIM12-203ENST00000426886 C5orf67F2Z3F1 127 aa13.66□□□□□ -0.22
SMIM12-203ENST00000426886 MYL1P05976 194 aa13.66□□□□□ -0.22
SMIM12-203ENST00000426886 ALCAMQ13740 583 aa13.66□□□□□ -0.22
SMIM12-203ENST00000426886 SLFN12LQ6IEE8 588 aa13.66□□□□□ -0.22
SMIM12-203ENST00000426886 ARMCX5Q6P1M9 558 aa13.66□□□□□ -0.22
SMIM12-203ENST00000426886 EPM2AIP1Q7L775 607 aaPredicted RBP13.66□□□□□ -0.22
SMIM12-203ENST00000426886 COLGALT2Q8IYK4 626 aa13.66□□□□□ -0.22
SMIM12-203ENST00000426886 RDH13Q8NBN7 331 aa13.66□□□□□ -0.22
SMIM12-203ENST00000426886 ZNF507Q8TCN5 953 aa13.66□□□□□ -0.22
SMIM12-203ENST00000426886 BCL7CQ8WUZ0 217 aaPredicted RBP13.66□□□□□ -0.22
SMIM12-203ENST00000426886 KCNN1Q92952 543 aa13.66□□□□□ -0.22
SMIM12-203ENST00000426886 TMEM169Q96HH4 297 aa13.66□□□□□ -0.22
SMIM12-203ENST00000426886 GBP4Q96PP9 640 aa13.66□□□□□ -0.22
SMIM12-203ENST00000426886 CLTAP09496 248 aa13.66□□□□□ -0.22
SMIM12-203ENST00000426886 IGFBP6P24592 240 aaPredicted RBP13.66□□□□□ -0.22
SMIM12-203ENST00000426886 IRS1P35568 1242 aa13.66□□□□□ -0.22
SMIM12-203ENST00000426886 GRIK3Q13003 919 aa13.66□□□□□ -0.22
SMIM12-203ENST00000426886 ENOX2Q16206 610 aaKnown RBP13.66□□□□□ -0.22
SMIM12-203ENST00000426886 C18orf25Q96B23 403 aaPredicted RBP13.66□□□□□ -0.22
SMIM12-203ENST00000426886 RPF1Q9H9Y2 349 aaKnown RBP13.66□□□□□ -0.22
SMIM12-203ENST00000426886 LACTBL1A8MY62 500 aa13.65□□□□□ -0.22
SMIM12-203ENST00000426886 FAM189A1O60320 539 aa13.65□□□□□ -0.22
SMIM12-203ENST00000426886 KRT17Q04695 432 aa13.65□□□□□ -0.22
SMIM12-203ENST00000426886 CAMK1Q14012 370 aa13.65□□□□□ -0.22
SMIM12-203ENST00000426886 SKIV2LQ15477 1246 aaKnown RBP13.65□□□□□ -0.22
SMIM12-203ENST00000426886 SLC39A11Q8N1S5 342 aa13.65□□□□□ -0.22
SMIM12-203ENST00000426886 SNX27Q96L92 541 aa13.65□□□□□ -0.22
SMIM12-203ENST00000426886 ZMYM2Q9UBW7 1377 aa13.65□□□□□ -0.22
SMIM12-203ENST00000426886 EIF3DO15371 548 aaKnown RBP eCLIP13.65□□□□□ -0.22
SMIM12-203ENST00000426886 TGFB1I1O43294 461 aa13.65□□□□□ -0.22
SMIM12-203ENST00000426886 RHOBTB3O94955 611 aa13.65□□□□□ -0.22
SMIM12-203ENST00000426886 CYP2J2P51589 502 aa13.65□□□□□ -0.22
SMIM12-203ENST00000426886 ERVFC1P60507 584 aa13.65□□□□□ -0.22
SMIM12-203ENST00000426886 ALKAL1Q6UXT8 129 aa13.65□□□□□ -0.22
SMIM12-203ENST00000426886 RBM23Q86U06 439 aaKnown RBP13.65□□□□□ -0.22
SMIM12-203ENST00000426886 AUTS2Q8WXX7 1259 aa13.65□□□□□ -0.22
SMIM12-203ENST00000426886 P2RX5Q93086 422 aa13.65□□□□□ -0.22
SMIM12-203ENST00000426886 SMARCE1Q969G3 411 aa13.65□□□□□ -0.22
SMIM12-203ENST00000426886 IGSF21Q96ID5 467 aa13.65□□□□□ -0.22
SMIM12-203ENST00000426886 TIGD1Q96MW7 591 aa13.65□□□□□ -0.22
SMIM12-203ENST00000426886 LMBRD1Q9NUN5 540 aa13.65□□□□□ -0.22
SMIM12-203ENST00000426886 PUF60Q9UHX1 559 aaKnown RBP13.65□□□□□ -0.22
SMIM12-203ENST00000426886 HOOK1Q9UJC3 728 aaKnown RBP13.65□□□□□ -0.22
SMIM12-203ENST00000426886 STYXL1Q9Y6J8 313 aa13.65□□□□□ -0.22
SMIM12-203ENST00000426886 BIN1O00499 593 aa13.64□□□□□ -0.23
SMIM12-203ENST00000426886 SOX4Q06945 474 aaPredicted RBP13.64□□□□□ -0.23
SMIM12-203ENST00000426886 DSC1Q08554 894 aa13.64□□□□□ -0.23
SMIM12-203ENST00000426886 PSMD2Q13200 908 aa13.64□□□□□ -0.23
SMIM12-203ENST00000426886 PTPROQ16827 1216 aa13.64□□□□□ -0.23
SMIM12-203ENST00000426886 KNOP1Q1ED39 458 aaKnown RBP13.64□□□□□ -0.23
SMIM12-203ENST00000426886 TMC7Q7Z402 723 aa13.64□□□□□ -0.23
SMIM12-203ENST00000426886 MAFAQ8NHW3 353 aaPredicted RBP13.64□□□□□ -0.23
SMIM12-203ENST00000426886 KIF12Q96FN5 646 aa13.64□□□□□ -0.23
SMIM12-203ENST00000426886 CPSF3Q9UKF6 684 aaKnown RBP13.64□□□□□ -0.23
SMIM12-203ENST00000426886 STXBP5LQ9Y2K9 1186 aa13.64□□□□□ -0.23
SMIM12-203ENST00000426886 INPPL1O15357 1258 aa13.64□□□□□ -0.23
SMIM12-203ENST00000426886 PPM1AP35813 382 aa13.64□□□□□ -0.23
SMIM12-203ENST00000426886 CLCNKBP51801 687 aa13.64□□□□□ -0.23
SMIM12-203ENST00000426886 GUCY2FP51841 1108 aa13.64□□□□□ -0.23
SMIM12-203ENST00000426886 PPP2R3AQ06190 1150 aa13.64□□□□□ -0.23
SMIM12-203ENST00000426886 TUSC3Q13454 348 aa13.64□□□□□ -0.23
SMIM12-203ENST00000426886 NAB2Q15742 525 aa13.64□□□□□ -0.23
SMIM12-203ENST00000426886 PLPP4Q5VZY2 271 aa13.64□□□□□ -0.23
SMIM12-203ENST00000426886 CRELD2Q6UXH1 353 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms