RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 PAIP2Q9BPZ3 127 aaKnown RBP15.38■□□□□ 0.05
ERCC3-202ENST00000426778 WNT8AQ9H1J5 351 aa15.38■□□□□ 0.05
ERCC3-202ENST00000426778 TMEM206Q9H813 350 aa15.38■□□□□ 0.05
ERCC3-202ENST00000426778 TCEAL9Q9UHQ7 104 aa15.38■□□□□ 0.05
ERCC3-202ENST00000426778 ASTN2O75129 1339 aaPredicted RBP15.38■□□□□ 0.05
ERCC3-202ENST00000426778 A8MUI8 341 aa15.37■□□□□ 0.05
ERCC3-202ENST00000426778 PIAS1O75925 651 aa15.37■□□□□ 0.05
ERCC3-202ENST00000426778 RARGP13631 454 aa15.37■□□□□ 0.05
ERCC3-202ENST00000426778 MAPK4P31152 587 aa15.37■□□□□ 0.05
ERCC3-202ENST00000426778 ACCSLQ4AC99 568 aa15.37■□□□□ 0.05
ERCC3-202ENST00000426778 ANKS4BQ8N8V4 417 aa15.37■□□□□ 0.05
ERCC3-202ENST00000426778 HELQQ8TDG4 1101 aa15.37■□□□□ 0.05
ERCC3-202ENST00000426778 ZNF341Q9BYN7 854 aa15.37■□□□□ 0.05
ERCC3-202ENST00000426778 GGA2Q9UJY4 613 aa15.37■□□□□ 0.05
ERCC3-202ENST00000426778 PNMA3Q9UL41 463 aa15.37■□□□□ 0.05
ERCC3-202ENST00000426778 SRRM3A6NNA2 597 aaPredicted RBP15.37■□□□□ 0.05
ERCC3-202ENST00000426778 AGTP01019 485 aa15.37■□□□□ 0.05
ERCC3-202ENST00000426778 ELF3P78545 371 aaPredicted RBP15.37■□□□□ 0.05
ERCC3-202ENST00000426778 SLC27A3Q5K4L6 730 aa15.37■□□□□ 0.05
ERCC3-202ENST00000426778 CYP4F22Q6NT55 531 aa15.37■□□□□ 0.05
ERCC3-202ENST00000426778 PRCCQ92733 491 aaPredicted RBP15.37■□□□□ 0.05
ERCC3-202ENST00000426778 ACSF2Q96CM8 615 aaPredicted RBP15.37■□□□□ 0.05
ERCC3-202ENST00000426778 RPS6KC1Q96S38 1066 aa15.37■□□□□ 0.05
ERCC3-202ENST00000426778 TMOD2Q9NZR1 351 aa15.37■□□□□ 0.05
ERCC3-202ENST00000426778 UBE4BO95155 1302 aa15.37■□□□□ 0.05
ERCC3-202ENST00000426778 CCNE2O96020 404 aa15.37■□□□□ 0.05
ERCC3-202ENST00000426778 CD58P19256 250 aa15.37■□□□□ 0.05
ERCC3-202ENST00000426778 ADCY8P40145 1251 aa15.37■□□□□ 0.05
ERCC3-202ENST00000426778 PPP2R5EQ16537 467 aa15.37■□□□□ 0.05
ERCC3-202ENST00000426778 ZFYVE27Q5T4F4 411 aa15.37■□□□□ 0.05
ERCC3-202ENST00000426778 ANKS1BQ7Z6G8 1248 aa15.37■□□□□ 0.05
ERCC3-202ENST00000426778 TAB3Q8N5C8 712 aaPredicted RBP15.37■□□□□ 0.05
ERCC3-202ENST00000426778 PARD3BQ8TEW8 1205 aa15.37■□□□□ 0.05
ERCC3-202ENST00000426778 SHC3Q92529 594 aa15.37■□□□□ 0.05
ERCC3-202ENST00000426778 FAM213AQ9BRX8 229 aa15.37■□□□□ 0.05
ERCC3-202ENST00000426778 ZNF536O15090 1300 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 PI4K2BG5E9Z4 385 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 H0YIN7 160 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 ENTPD3O75355 529 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 SCP2P22307 547 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 PSMC4P43686 418 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 NPTX2P47972 431 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 DRG2P55039 364 aaKnown RBP15.36■□□□□ 0.05
ERCC3-202ENST00000426778 MFAP3P55082 362 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 WNT7BP56706 349 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 ATP13A4Q4VNC1 1196 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 KAZNQ674X7 775 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 FAM47EQ6ZV65 393 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 SV2AQ7L0J3 742 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 TRPM8Q7Z2W7 1104 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 PIGWQ7Z7B1 504 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 SRRM1Q8IYB3 904 aaKnown RBP15.36■□□□□ 0.05
ERCC3-202ENST00000426778 PSPC1Q8WXF1 523 aaKnown RBP15.36■□□□□ 0.05
ERCC3-202ENST00000426778 MYCBPQ99417 103 aaPredicted RBP15.36■□□□□ 0.05
ERCC3-202ENST00000426778 AGO4Q9HCK5 861 aaKnown RBP15.36■□□□□ 0.05
ERCC3-202ENST00000426778 ZNF70Q9UC06 446 aaPredicted RBP15.36■□□□□ 0.05
ERCC3-202ENST00000426778 STK38LQ9Y2H1 464 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 ATP8B3O60423 1300 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 THAP12O43422 761 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 CDR2Q01850 454 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 DRP2Q13474 957 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 PLCB4Q15147 1175 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 KRT39Q6A163 491 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 SLC39A4Q6P5W5 647 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 VSTM1Q6UX27 236 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 CCDC63Q8NA47 563 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 TAOK3Q9H2K8 898 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 QTRT2Q9H974 415 aaKnown RBP15.36■□□□□ 0.05
ERCC3-202ENST00000426778 EHMT1Q9H9B1 1298 aa15.36■□□□□ 0.05
ERCC3-202ENST00000426778 SPDYE2BA6NHP3 402 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 CYP1A2P05177 515 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 SPDYE6P0CI01 402 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 RALAP11233 206 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 CAP2P40123 477 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 SEZ6Q53EL9 994 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 DDX1Q92499 740 aaKnown RBP15.35■□□□□ 0.05
ERCC3-202ENST00000426778 HAUS1Q96CS2 278 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 BICD1Q96G01 975 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 NT5C1BQ96P26 610 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 RIT2Q99578 217 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 C11orf70Q9BRQ4 267 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.35■□□□□ 0.05
ERCC3-202ENST00000426778 RAB20Q9NX57 234 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 KCND2Q9NZV8 630 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 GTF3C4Q9UKN8 822 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 TBX20Q9UMR3 447 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 SPATA31A6Q5VVP1 1343 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 ADGRA3Q8IWK6 1321 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 HNRNPDLO14979 420 aaKnown RBP15.35■□□□□ 0.05
ERCC3-202ENST00000426778 GRIN3BO60391 1043 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 TCF4P15884 667 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 CDC25CP30307 473 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 GTF2BQ00403 316 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 SLMAPQ14BN4 828 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 CYFIP1Q7L576 1253 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 GLIS1Q8NBF1 620 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 WNK4Q96J92 1243 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 KDM4CQ9H3R0 1056 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 ATRNL1Q5VV63 1379 aa15.35■□□□□ 0.05
ERCC3-202ENST00000426778 SPAG7O75391 227 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms