RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 KIF5CO60282 957 aa18.76■□□□□ 0.59
FN1-208ENST00000426059 LCA5LO95447 670 aa18.76■□□□□ 0.59
FN1-208ENST00000426059 C4BPAP04003 597 aaKnown RBP18.76■□□□□ 0.59
FN1-208ENST00000426059 USP8P40818 1118 aa18.76■□□□□ 0.59
FN1-208ENST00000426059 MAGEA1P43355 309 aa18.76■□□□□ 0.59
FN1-208ENST00000426059 VAV2P52735 878 aa18.76■□□□□ 0.59
FN1-208ENST00000426059 CLDN10P78369 228 aa18.76■□□□□ 0.59
FN1-208ENST00000426059 SPOPLQ6IQ16 392 aa18.76■□□□□ 0.59
FN1-208ENST00000426059 C15orf39Q6ZRI6 1047 aa18.76■□□□□ 0.59
FN1-208ENST00000426059 SLC35F6Q8N357 371 aa18.76■□□□□ 0.59
FN1-208ENST00000426059 TMEM130Q8N3G9 435 aa18.76■□□□□ 0.59
FN1-208ENST00000426059 OSMRQ99650 979 aa18.76■□□□□ 0.59
FN1-208ENST00000426059 ACP6Q9NPH0 428 aa18.76■□□□□ 0.59
FN1-208ENST00000426059 CPSF3Q9UKF6 684 aaKnown RBP18.76■□□□□ 0.59
FN1-208ENST00000426059 MACROD2A1Z1Q3 448 aa18.76■□□□□ 0.59
FN1-208ENST00000426059 ZEB2O60315 1214 aa18.76■□□□□ 0.59
FN1-208ENST00000426059 PRKAR2AP13861 404 aaKnown RBP18.76■□□□□ 0.59
FN1-208ENST00000426059 GTF2H1P32780 548 aa18.76■□□□□ 0.59
FN1-208ENST00000426059 POU5F1BQ06416 359 aa18.76■□□□□ 0.59
FN1-208ENST00000426059 TNFSF13BQ9Y275 285 aa18.76■□□□□ 0.59
FN1-208ENST00000426059 MBLAC1A4D2B0 266 aaPredicted RBP18.75■□□□□ 0.59
FN1-208ENST00000426059 VNN1O95497 513 aa18.75■□□□□ 0.59
FN1-208ENST00000426059 CASQ1P31415 396 aa18.75■□□□□ 0.59
FN1-208ENST00000426059 ADAM17P78536 824 aa18.75■□□□□ 0.59
FN1-208ENST00000426059 SLC18A3Q16572 532 aa18.75■□□□□ 0.59
FN1-208ENST00000426059 ZACNQ401N2 412 aa18.75■□□□□ 0.59
FN1-208ENST00000426059 BRSK2Q8IWQ3 736 aa18.75■□□□□ 0.59
FN1-208ENST00000426059 HELQQ8TDG4 1101 aa18.75■□□□□ 0.59
FN1-208ENST00000426059 DHX38Q92620 1227 aaKnown RBP18.75■□□□□ 0.59
FN1-208ENST00000426059 PACSIN1Q9BY11 444 aa18.75■□□□□ 0.59
FN1-208ENST00000426059 ADAMTS10Q9H324 1103 aa18.75■□□□□ 0.59
FN1-208ENST00000426059 PDZD7Q9H5P4 517 aa18.75■□□□□ 0.59
FN1-208ENST00000426059 SEPT4O43236 478 aa18.75■□□□□ 0.59
FN1-208ENST00000426059 GPR32O75388 356 aa18.75■□□□□ 0.59
FN1-208ENST00000426059 CLSTN1O94985 981 aa18.75■□□□□ 0.59
FN1-208ENST00000426059 HLA-DRAP01903 254 aa18.75■□□□□ 0.59
FN1-208ENST00000426059 PRKCIP41743 596 aa18.75■□□□□ 0.59
FN1-208ENST00000426059 GJA9P57773 515 aa18.75■□□□□ 0.59
FN1-208ENST00000426059 IFNLR1Q8IU57 520 aaPredicted RBP18.75■□□□□ 0.59
FN1-208ENST00000426059 C7orf31Q8N865 590 aa18.75■□□□□ 0.59
FN1-208ENST00000426059 PRIMPOLQ96LW4 560 aa18.75■□□□□ 0.59
FN1-208ENST00000426059 CGRRF1Q99675 332 aa18.75■□□□□ 0.59
FN1-208ENST00000426059 ARID3AQ99856 593 aa18.75■□□□□ 0.59
FN1-208ENST00000426059 TSPAN1O60635 241 aa18.74■□□□□ 0.59
FN1-208ENST00000426059 ERLIN2O94905 339 aa18.74■□□□□ 0.59
FN1-208ENST00000426059 CXCL8P10145 99 aa18.74■□□□□ 0.59
FN1-208ENST00000426059 RARBP10826 455 aa18.74■□□□□ 0.59
FN1-208ENST00000426059 FERP16591 822 aa18.74■□□□□ 0.59
FN1-208ENST00000426059 PIK3CAP42336 1068 aa18.74■□□□□ 0.59
FN1-208ENST00000426059 NT5C1BQ96P26 610 aa18.74■□□□□ 0.59
FN1-208ENST00000426059 MTMR12Q9C0I1 747 aa18.74■□□□□ 0.59
FN1-208ENST00000426059 KRT86O43790 486 aa18.74■□□□□ 0.59
FN1-208ENST00000426059 URI1O94763 535 aaPredicted RBP18.74■□□□□ 0.59
FN1-208ENST00000426059 KIF5AQ12840 1032 aa18.74■□□□□ 0.59
FN1-208ENST00000426059 FAM187BQ17R55 369 aa18.74■□□□□ 0.59
FN1-208ENST00000426059 TSC1Q92574 1164 aa18.74■□□□□ 0.59
FN1-208ENST00000426059 SRRDQ9UH36 339 aa18.74■□□□□ 0.59
FN1-208ENST00000426059 SALL4Q9UJQ4 1053 aa18.74■□□□□ 0.59
FN1-208ENST00000426059 CASP8AP2Q9UKL3 1982 aa18.73■□□□□ 0.59
FN1-208ENST00000426059 ANK1P16157 1881 aa18.73■□□□□ 0.59
FN1-208ENST00000426059 UQCRHLA0A096LP55 91 aa18.73■□□□□ 0.59
FN1-208ENST00000426059 SMIM35A0A1B0GVV1 85 aa18.73■□□□□ 0.59
FN1-208ENST00000426059 C17orf102A2RUQ5 167 aa18.73■□□□□ 0.59
FN1-208ENST00000426059 CST3P01034 146 aaPredicted RBP18.73■□□□□ 0.59
FN1-208ENST00000426059 CALCAP01258 141 aa18.73■□□□□ 0.59
FN1-208ENST00000426059 UQCRHP07919 91 aa18.73■□□□□ 0.59
FN1-208ENST00000426059 GLYCTKQ8IVS8 523 aa18.73■□□□□ 0.59
FN1-208ENST00000426059 TMEM40Q8WWA1 233 aa18.73■□□□□ 0.59
FN1-208ENST00000426059 XPNPEP3Q9NQH7 507 aa18.73■□□□□ 0.59
FN1-208ENST00000426059 BZW2Q9Y6E2 419 aaKnown RBP18.73■□□□□ 0.59
FN1-208ENST00000426059 MYH10P35580 1976 aa18.73■□□□□ 0.59
FN1-208ENST00000426059 MEFVO15553 781 aaPredicted RBP18.73■□□□□ 0.59
FN1-208ENST00000426059 PHACTR2O75167 634 aa18.73■□□□□ 0.59
FN1-208ENST00000426059 NBPF20Q3BBV1 942 aa18.73■□□□□ 0.59
FN1-208ENST00000426059 ZNF410Q86VK4 478 aa18.73■□□□□ 0.59
FN1-208ENST00000426059 REM2Q8IYK8 340 aaPredicted RBP18.73■□□□□ 0.59
FN1-208ENST00000426059 OLIG1Q8TAK6 271 aa18.73■□□□□ 0.59
FN1-208ENST00000426059 SLC20A1Q8WUM9 679 aa18.73■□□□□ 0.59
FN1-208ENST00000426059 KATNAL1Q9BW62 490 aa18.73■□□□□ 0.59
FN1-208ENST00000426059 DDX3XO00571 662 aaKnown RBP eCLIP18.72■□□□□ 0.593e-72■■■□□ 16.3
FN1-208ENST00000426059 TUBB4AP04350 444 aa18.72■□□□□ 0.59
FN1-208ENST00000426059 STAG3L1P0CL83 205 aa18.72■□□□□ 0.59
FN1-208ENST00000426059 TFAMQ00059 246 aaKnown RBP18.72■□□□□ 0.59
FN1-208ENST00000426059 EFCAB13Q8IY85 973 aa18.72■□□□□ 0.59
FN1-208ENST00000426059 LNX1Q8TBB1 728 aaPredicted RBP18.72■□□□□ 0.59
FN1-208ENST00000426059 TMCO5BA8MYB1 307 aa18.71■□□□□ 0.59
FN1-208ENST00000426059 CYP26A1O43174 497 aa18.71■□□□□ 0.59
FN1-208ENST00000426059 SGPL1O95470 568 aa18.71■□□□□ 0.59
FN1-208ENST00000426059 RFX1P22670 979 aa18.71■□□□□ 0.59
FN1-208ENST00000426059 MFAP3P55082 362 aa18.71■□□□□ 0.59
FN1-208ENST00000426059 ENPEPQ07075 957 aa18.71■□□□□ 0.59
FN1-208ENST00000426059 FAM47CQ5HY64 1035 aa18.71■□□□□ 0.59
FN1-208ENST00000426059 PALB2Q86YC2 1186 aa18.71■□□□□ 0.59
FN1-208ENST00000426059 MYRIPQ8NFW9 859 aa18.71■□□□□ 0.59
FN1-208ENST00000426059 APOBEC3GQ9HC16 384 aaKnown RBP18.71■□□□□ 0.59
FN1-208ENST00000426059 SEPT11Q9NVA2 429 aaKnown RBP18.71■□□□□ 0.59
FN1-208ENST00000426059 TSKSQ9UJT2 592 aa18.71■□□□□ 0.59
FN1-208ENST00000426059 NAGPAQ9UK23 515 aa18.71■□□□□ 0.59
FN1-208ENST00000426059 UMODL1Q5DID0 1318 aa18.71■□□□□ 0.59
FN1-208ENST00000426059 ENC1O14682 589 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms