RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 C8AP07357 584 aa17.26■□□□□ 0.35
RPUSD3-204ENST00000424438 XRCC6P12956 609 aaKnown RBP eCLIP17.26■□□□□ 0.35
RPUSD3-204ENST00000424438 RPL17P18621 184 aaKnown RBP17.26■□□□□ 0.35
RPUSD3-204ENST00000424438 SNW1Q13573 536 aaKnown RBP17.26■□□□□ 0.35
RPUSD3-204ENST00000424438 TOB2Q14106 344 aaPredicted RBP17.26■□□□□ 0.35
RPUSD3-204ENST00000424438 PSMD5Q16401 504 aa17.26■□□□□ 0.35
RPUSD3-204ENST00000424438 FAM187BQ17R55 369 aa17.26■□□□□ 0.35
RPUSD3-204ENST00000424438 DYDC2Q96IM9 177 aa17.26■□□□□ 0.35
RPUSD3-204ENST00000424438 HSD17B14Q9BPX1 270 aa17.26■□□□□ 0.35
RPUSD3-204ENST00000424438 GDE1Q9NZC3 331 aa17.26■□□□□ 0.35
RPUSD3-204ENST00000424438 SMG5Q9UPR3 1016 aaKnown RBP17.26■□□□□ 0.35
RPUSD3-204ENST00000424438 MRPS17Q9Y2R5 130 aaKnown RBP17.26■□□□□ 0.35
RPUSD3-204ENST00000424438 STK36Q9NRP7 1315 aa17.25■□□□□ 0.35
RPUSD3-204ENST00000424438 FAM170BA6NMN3 283 aa17.25■□□□□ 0.35
RPUSD3-204ENST00000424438 TMEM189-UBE2V1I3L0A0 370 aa17.25■□□□□ 0.35
RPUSD3-204ENST00000424438 LRRN2O75325 713 aa17.25■□□□□ 0.35
RPUSD3-204ENST00000424438 BAG4O95429 457 aaKnown RBP17.25■□□□□ 0.35
RPUSD3-204ENST00000424438 RBM25P49756 843 aaKnown RBP17.25■□□□□ 0.35
RPUSD3-204ENST00000424438 PRSS55Q6UWB4 352 aaPredicted RBP17.25■□□□□ 0.35
RPUSD3-204ENST00000424438 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.25■□□□□ 0.35
RPUSD3-204ENST00000424438 RUFY3Q7L099 469 aa17.25■□□□□ 0.35
RPUSD3-204ENST00000424438 NPAS3Q8IXF0 933 aa17.25■□□□□ 0.35
RPUSD3-204ENST00000424438 ASAP3Q8TDY4 903 aa17.25■□□□□ 0.35
RPUSD3-204ENST00000424438 ZSWIM6Q9HCJ5 1215 aa17.25■□□□□ 0.35
RPUSD3-204ENST00000424438 GMEB2Q9UKD1 530 aa17.25■□□□□ 0.35
RPUSD3-204ENST00000424438 PKD1L2Q7Z442 2459 aa17.24■□□□□ 0.35
RPUSD3-204ENST00000424438 REC8O95072 547 aa17.24■□□□□ 0.35
RPUSD3-204ENST00000424438 NPTXRO95502 500 aa17.24■□□□□ 0.35
RPUSD3-204ENST00000424438 MYBP10242 640 aa17.24■□□□□ 0.35
RPUSD3-204ENST00000424438 XBP1P17861 261 aa17.24■□□□□ 0.35
RPUSD3-204ENST00000424438 GLRA2P23416 452 aa17.24■□□□□ 0.35
RPUSD3-204ENST00000424438 AKAP5P24588 427 aa17.24■□□□□ 0.35
RPUSD3-204ENST00000424438 CSTF1Q05048 431 aaKnown RBP17.24■□□□□ 0.35
RPUSD3-204ENST00000424438 COL9A2Q14055 689 aaPredicted RBP17.24■□□□□ 0.35
RPUSD3-204ENST00000424438 UBXN2BQ14CS0 331 aa17.24■□□□□ 0.35
RPUSD3-204ENST00000424438 NAB2Q15742 525 aa17.24■□□□□ 0.35
RPUSD3-204ENST00000424438 PPM1JQ5JR12 505 aa17.24■□□□□ 0.35
RPUSD3-204ENST00000424438 FAM171A1Q5VUB5 890 aa17.24■□□□□ 0.35
RPUSD3-204ENST00000424438 CDCA2Q69YH5 1023 aaPredicted RBP17.24■□□□□ 0.35
RPUSD3-204ENST00000424438 CENPQQ7L2Z9 268 aaPredicted RBP17.24■□□□□ 0.35
RPUSD3-204ENST00000424438 GLYCTKQ8IVS8 523 aa17.24■□□□□ 0.35
RPUSD3-204ENST00000424438 ITFG1Q8TB96 612 aa17.24■□□□□ 0.35
RPUSD3-204ENST00000424438 DNASE1L2Q92874 299 aa17.24■□□□□ 0.35
RPUSD3-204ENST00000424438 APOL6Q9BWW8 343 aa17.24■□□□□ 0.35
RPUSD3-204ENST00000424438 TM6SF1Q9BZW5 370 aa17.24■□□□□ 0.35
RPUSD3-204ENST00000424438 BMP2KQ9NSY1 1161 aaPredicted RBP17.24■□□□□ 0.35
RPUSD3-204ENST00000424438 PRMT7Q9NVM4 692 aaPredicted RBP17.24■□□□□ 0.35
RPUSD3-204ENST00000424438 MTRRQ9UBK8 725 aa17.24■□□□□ 0.35
RPUSD3-204ENST00000424438 ZBTB39O15060 712 aa17.23■□□□□ 0.35
RPUSD3-204ENST00000424438 B4GALT5O43286 388 aa17.23■□□□□ 0.35
RPUSD3-204ENST00000424438 CCNT1O60563 726 aaKnown RBP17.23■□□□□ 0.35
RPUSD3-204ENST00000424438 LRP3O75074 770 aa17.23■□□□□ 0.35
RPUSD3-204ENST00000424438 CDKL5O76039 1030 aa17.23■□□□□ 0.35
RPUSD3-204ENST00000424438 KIF4AO95239 1232 aa17.23■□□□□ 0.35
RPUSD3-204ENST00000424438 THP07101 528 aa17.23■□□□□ 0.35
RPUSD3-204ENST00000424438 FGFR3P22607 806 aa17.23■□□□□ 0.35
RPUSD3-204ENST00000424438 TGM1P22735 817 aa17.23■□□□□ 0.35
RPUSD3-204ENST00000424438 RARRES1P49788 294 aa17.23■□□□□ 0.35
RPUSD3-204ENST00000424438 NTHL1P78549 312 aa17.23■□□□□ 0.35
RPUSD3-204ENST00000424438 CTTNQ14247 550 aaKnown RBP17.23■□□□□ 0.35
RPUSD3-204ENST00000424438 PABPC1LQ4VXU2 614 aaKnown RBP17.23■□□□□ 0.35
RPUSD3-204ENST00000424438 NCAPH2Q6IBW4 605 aa17.23■□□□□ 0.35
RPUSD3-204ENST00000424438 YTHDC1Q96MU7 727 aaKnown RBP17.23■□□□□ 0.35
RPUSD3-204ENST00000424438 EIF2AK1Q9BQI3 630 aaKnown RBP17.23■□□□□ 0.35
RPUSD3-204ENST00000424438 FZD8Q9H461 694 aa17.23■□□□□ 0.35
RPUSD3-204ENST00000424438 TRPV5Q9NQA5 729 aa17.23■□□□□ 0.35
RPUSD3-204ENST00000424438 PARP2Q9UGN5 583 aa17.23■□□□□ 0.35
RPUSD3-204ENST00000424438 MTF2Q9Y483 593 aaPredicted RBP17.23■□□□□ 0.35
RPUSD3-204ENST00000424438 BACE2Q9Y5Z0 518 aa17.23■□□□□ 0.35
RPUSD3-204ENST00000424438 CNOT1A5YKK6 2376 aaKnown RBP17.22■□□□□ 0.35
RPUSD3-204ENST00000424438 ANKRD11Q6UB99 2663 aaPredicted RBP17.22■□□□□ 0.35
RPUSD3-204ENST00000424438 PTGESO14684 152 aa17.22■□□□□ 0.35
RPUSD3-204ENST00000424438 N4BP3O15049 544 aa17.22■□□□□ 0.35
RPUSD3-204ENST00000424438 MICAL2O94851 1124 aa17.22■□□□□ 0.35
RPUSD3-204ENST00000424438 TARSP26639 723 aaKnown RBP17.22■□□□□ 0.35
RPUSD3-204ENST00000424438 NRLP54845 237 aa17.22■□□□□ 0.35
RPUSD3-204ENST00000424438 CYP4A11Q02928 519 aa17.22■□□□□ 0.35
RPUSD3-204ENST00000424438 ADCY1Q08828 1119 aa17.22■□□□□ 0.35
RPUSD3-204ENST00000424438 FZD5Q13467 585 aa17.22■□□□□ 0.35
RPUSD3-204ENST00000424438 AXDND1Q5T1B0 1012 aaPredicted RBP17.22■□□□□ 0.35
RPUSD3-204ENST00000424438 ZNF852Q6ZMS4 543 aa17.22■□□□□ 0.35
RPUSD3-204ENST00000424438 POTEDQ86YR6 584 aa17.22■□□□□ 0.35
RPUSD3-204ENST00000424438 TPH2Q8IWU9 490 aa17.22■□□□□ 0.35
RPUSD3-204ENST00000424438 ZNF687Q8N1G0 1237 aa17.22■□□□□ 0.35
RPUSD3-204ENST00000424438 SLC7A14Q8TBB6 771 aa17.22■□□□□ 0.35
RPUSD3-204ENST00000424438 AIFM3Q96NN9 605 aa17.22■□□□□ 0.35
RPUSD3-204ENST00000424438 PAAF1Q9BRP4 392 aa17.22■□□□□ 0.35
RPUSD3-204ENST00000424438 DNMT3BQ9UBC3 853 aaKnown RBP17.22■□□□□ 0.35
RPUSD3-204ENST00000424438 RAB23Q9ULC3 237 aa17.22■□□□□ 0.35
RPUSD3-204ENST00000424438 COL4A3Q01955 1670 aa17.21■□□□□ 0.35
RPUSD3-204ENST00000424438 ARHGEF37A1IGU5 675 aa17.21■□□□□ 0.35
RPUSD3-204ENST00000424438 CCL16O15467 120 aa17.21■□□□□ 0.35
RPUSD3-204ENST00000424438 MARCH6O60337 910 aa17.21■□□□□ 0.35
RPUSD3-204ENST00000424438 TDGF1P13385 188 aa17.21■□□□□ 0.35
RPUSD3-204ENST00000424438 MCPH1Q8NEM0 835 aa17.21■□□□□ 0.35
RPUSD3-204ENST00000424438 NETO1Q8TDF5 533 aa17.21■□□□□ 0.35
RPUSD3-204ENST00000424438 ELSPBP1Q96BH3 223 aa17.21■□□□□ 0.35
RPUSD3-204ENST00000424438 C2orf40Q9H1Z8 148 aa17.21■□□□□ 0.35
RPUSD3-204ENST00000424438 CHRDQ9H2X0 955 aa17.21■□□□□ 0.35
RPUSD3-204ENST00000424438 KLK14Q9P0G3 267 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms