RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 ATP6V1C1P21283 382 aa13.79□□□□□ -0.2
TOP2B-203ENST00000424225 ZNF333Q96JL9 665 aa13.79□□□□□ -0.2
TOP2B-203ENST00000424225 MAGEB18Q96M61 343 aa13.79□□□□□ -0.2
TOP2B-203ENST00000424225 HSD17B14Q9BPX1 270 aa13.79□□□□□ -0.2
TOP2B-203ENST00000424225 IGLV3-22A0A075B6J6 115 aa13.79□□□□□ -0.2
TOP2B-203ENST00000424225 ONECUT3O60422 494 aaPredicted RBP13.79□□□□□ -0.2
TOP2B-203ENST00000424225 LMNB1P20700 586 aa13.79□□□□□ -0.2
TOP2B-203ENST00000424225 EFTUD2Q15029 972 aaKnown RBP eCLIP13.79□□□□□ -0.25e-6■■■■□ 26
TOP2B-203ENST00000424225 PKN2Q16513 984 aaKnown RBP13.79□□□□□ -0.2
TOP2B-203ENST00000424225 CWF19L1Q69YN2 538 aaKnown RBP13.79□□□□□ -0.2
TOP2B-203ENST00000424225 SERPINB12Q96P63 405 aa13.79□□□□□ -0.2
TOP2B-203ENST00000424225 PCIF1Q9H4Z3 704 aa13.79□□□□□ -0.2
TOP2B-203ENST00000424225 UBE2TQ9NPD8 197 aaPredicted RBP13.79□□□□□ -0.2
TOP2B-203ENST00000424225 CTTNBP2NLQ9P2B4 639 aa13.79□□□□□ -0.2
TOP2B-203ENST00000424225 ATRNL1Q5VV63 1379 aa13.78□□□□□ -0.2
TOP2B-203ENST00000424225 WFS1O76024 890 aa13.78□□□□□ -0.2
TOP2B-203ENST00000424225 KRT18P05783 430 aaKnown RBP13.78□□□□□ -0.2
TOP2B-203ENST00000424225 NEK3P51956 506 aa13.78□□□□□ -0.2
TOP2B-203ENST00000424225 ARHGAP4P98171 946 aa13.78□□□□□ -0.2
TOP2B-203ENST00000424225 ZNF720Q7Z2F6 126 aa13.78□□□□□ -0.2
TOP2B-203ENST00000424225 CERS5Q8N5B7 392 aa13.78□□□□□ -0.2
TOP2B-203ENST00000424225 EIF2AK1Q9BQI3 630 aaKnown RBP13.78□□□□□ -0.2
TOP2B-203ENST00000424225 KRT82Q9NSB4 513 aa13.78□□□□□ -0.2
TOP2B-203ENST00000424225 ETAA1Q9NY74 926 aa13.78□□□□□ -0.2
TOP2B-203ENST00000424225 LGALS13Q9UHV8 139 aa13.78□□□□□ -0.2
TOP2B-203ENST00000424225 PHTF1Q9UMS5 762 aa13.78□□□□□ -0.2
TOP2B-203ENST00000424225 LTBP1Q14766 1721 aa13.78□□□□□ -0.2
TOP2B-203ENST00000424225 KRT36O76013 467 aa13.78□□□□□ -0.2
TOP2B-203ENST00000424225 FDX1P10109 184 aa13.78□□□□□ -0.2
TOP2B-203ENST00000424225 POLGP54098 1239 aaPredicted RBP13.78□□□□□ -0.2
TOP2B-203ENST00000424225 YARSP54577 528 aaKnown RBP13.78□□□□□ -0.2
TOP2B-203ENST00000424225 TCEAL1Q15170 157 aa13.78□□□□□ -0.2
TOP2B-203ENST00000424225 TAF1BQ53T94 588 aaPredicted RBP13.78□□□□□ -0.2
TOP2B-203ENST00000424225 ACSBG2Q5FVE4 666 aa13.78□□□□□ -0.2
TOP2B-203ENST00000424225 KCNK13Q9HB14 408 aa13.78□□□□□ -0.2
TOP2B-203ENST00000424225 USP20Q9Y2K6 914 aa13.78□□□□□ -0.2
TOP2B-203ENST00000424225 WASF2Q9Y6W5 498 aa13.78□□□□□ -0.2
TOP2B-203ENST00000424225 CCDC15Q0P6D6 951 aa13.78□□□□□ -0.2
TOP2B-203ENST00000424225 C4orf33Q8N1A6 199 aa13.78□□□□□ -0.2
TOP2B-203ENST00000424225 MAK16Q9BXY0 300 aaKnown RBP13.78□□□□□ -0.2
TOP2B-203ENST00000424225 RAB34Q9BZG1 259 aa13.78□□□□□ -0.2
TOP2B-203ENST00000424225 WDR35Q9P2L0 1181 aa13.78□□□□□ -0.2
TOP2B-203ENST00000424225 DNAH12Q6ZR08 3092 aa13.78□□□□□ -0.2
TOP2B-203ENST00000424225 MROH7Q68CQ1 1323 aa13.78□□□□□ -0.2
TOP2B-203ENST00000424225 KDM3AQ9Y4C1 1321 aa13.78□□□□□ -0.2
TOP2B-203ENST00000424225 TMEM150BA6NC51 233 aa13.77□□□□□ -0.2
TOP2B-203ENST00000424225 FSCN2O14926 492 aa13.77□□□□□ -0.2
TOP2B-203ENST00000424225 MAGEB2O15479 319 aa13.77□□□□□ -0.2
TOP2B-203ENST00000424225 CYP26A1O43174 497 aa13.77□□□□□ -0.2
TOP2B-203ENST00000424225 SNUPNO95149 360 aaKnown RBP13.77□□□□□ -0.2
TOP2B-203ENST00000424225 TTLL1O95922 423 aa13.77□□□□□ -0.2
TOP2B-203ENST00000424225 NFIAQ12857 509 aa13.77□□□□□ -0.2
TOP2B-203ENST00000424225 KLF1Q13351 362 aaPredicted RBP13.77□□□□□ -0.2
TOP2B-203ENST00000424225 MTM1Q13496 603 aa13.77□□□□□ -0.2
TOP2B-203ENST00000424225 CLEC4GQ6UXB4 293 aa13.77□□□□□ -0.2
TOP2B-203ENST00000424225 OTOAQ7RTW8 1153 aa13.77□□□□□ -0.2
TOP2B-203ENST00000424225 FHDC1Q9C0D6 1143 aaPredicted RBP13.77□□□□□ -0.2
TOP2B-203ENST00000424225 KIAA1586Q9HCI6 787 aa13.77□□□□□ -0.2
TOP2B-203ENST00000424225 DAGLAQ9Y4D2 1042 aa13.77□□□□□ -0.2
TOP2B-203ENST00000424225 TBX10O75333 385 aa13.77□□□□□ -0.21
TOP2B-203ENST00000424225 RPS6KA3P51812 740 aa13.77□□□□□ -0.21
TOP2B-203ENST00000424225 PARP6Q2NL67 630 aa13.77□□□□□ -0.21
TOP2B-203ENST00000424225 TTC7BQ86TV6 843 aa13.77□□□□□ -0.21
TOP2B-203ENST00000424225 NUDCD1Q96RS6 583 aa13.77□□□□□ -0.21
TOP2B-203ENST00000424225 CBWD1Q9BRT8 395 aa13.77□□□□□ -0.21
TOP2B-203ENST00000424225 NUP85Q9BW27 656 aa13.77□□□□□ -0.21
TOP2B-203ENST00000424225 HEMGNQ9BXL5 484 aa13.77□□□□□ -0.21
TOP2B-203ENST00000424225 ROPN1BQ9BZX4 212 aaPredicted RBP13.77□□□□□ -0.21
TOP2B-203ENST00000424225 TLE6Q9H808 572 aa13.77□□□□□ -0.21
TOP2B-203ENST00000424225 ROPN1Q9HAT0 212 aaPredicted RBP13.77□□□□□ -0.21
TOP2B-203ENST00000424225 ARL8BQ9NVJ2 186 aa13.77□□□□□ -0.21
TOP2B-203ENST00000424225 SYNGAP1Q96PV0 1343 aa13.77□□□□□ -0.21
TOP2B-203ENST00000424225 PYGLP06737 847 aa13.77□□□□□ -0.21
TOP2B-203ENST00000424225 TNFAIP3P21580 790 aa13.77□□□□□ -0.21
TOP2B-203ENST00000424225 ANXA13P27216 316 aa13.77□□□□□ -0.21
TOP2B-203ENST00000424225 GCLMP48507 274 aa13.77□□□□□ -0.21
TOP2B-203ENST00000424225 OVGP1Q12889 678 aa13.77□□□□□ -0.21
TOP2B-203ENST00000424225 TMEM154Q6P9G4 183 aa13.77□□□□□ -0.21
TOP2B-203ENST00000424225 CYFIP1Q7L576 1253 aa13.77□□□□□ -0.21
TOP2B-203ENST00000424225 CD209Q9NNX6 404 aa13.77□□□□□ -0.21
TOP2B-203ENST00000424225 PAPOLBQ9NRJ5 636 aaKnown RBP13.77□□□□□ -0.21
TOP2B-203ENST00000424225 OLFML3Q9NRN5 406 aa13.77□□□□□ -0.21
TOP2B-203ENST00000424225 POLLQ9UGP5 575 aa13.77□□□□□ -0.21
TOP2B-203ENST00000424225 EMSYQ7Z589 1322 aa13.77□□□□□ -0.21
TOP2B-203ENST00000424225 PODXLO00592 558 aa13.76□□□□□ -0.21
TOP2B-203ENST00000424225 CALUO43852 315 aaPredicted RBP13.76□□□□□ -0.21
TOP2B-203ENST00000424225 SSTR3P32745 418 aaPredicted RBP13.76□□□□□ -0.21
TOP2B-203ENST00000424225 SKIV2L2P42285 1042 aaKnown RBP13.76□□□□□ -0.21
TOP2B-203ENST00000424225 ASPRV1Q53RT3 343 aa13.76□□□□□ -0.21
TOP2B-203ENST00000424225 RINLQ6ZS11 566 aa13.76□□□□□ -0.21
TOP2B-203ENST00000424225 TRABD2AQ86V40 505 aa13.76□□□□□ -0.21
TOP2B-203ENST00000424225 DYDC1Q8WWB3 177 aa13.76□□□□□ -0.21
TOP2B-203ENST00000424225 SLCO2A1Q92959 643 aa13.76□□□□□ -0.21
TOP2B-203ENST00000424225 PTCD3Q96EY7 689 aaKnown RBP13.76□□□□□ -0.21
TOP2B-203ENST00000424225 PITPNM3Q9BZ71 974 aa13.76□□□□□ -0.21
TOP2B-203ENST00000424225 HOMER3Q9NSC5 361 aa13.76□□□□□ -0.21
TOP2B-203ENST00000424225 SPATS2LQ9NUQ6 558 aaKnown RBP13.76□□□□□ -0.21
TOP2B-203ENST00000424225 DIS3Q9Y2L1 958 aaKnown RBP13.76□□□□□ -0.21
TOP2B-203ENST00000424225 GAKO14976 1311 aa13.76□□□□□ -0.21
TOP2B-203ENST00000424225 TNS1Q9HBL0 1735 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms