RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 KCNK9Q9NPC2 374 aa15.37■□□□□ 0.05
MSH5-206ENST00000423982 FAM13AO94988 1023 aa15.36■□□□□ 0.05
MSH5-206ENST00000423982 OAS1P00973 400 aaKnown RBP15.36■□□□□ 0.05
MSH5-206ENST00000423982 CHRNA3P32297 505 aa15.36■□□□□ 0.05
MSH5-206ENST00000423982 CHKAP35790 457 aa15.36■□□□□ 0.05
MSH5-206ENST00000423982 DRG2P55039 364 aaKnown RBP15.36■□□□□ 0.05
MSH5-206ENST00000423982 SNX1Q13596 522 aa15.36■□□□□ 0.05
MSH5-206ENST00000423982 ZNF268Q14587 947 aaPredicted RBP15.36■□□□□ 0.05
MSH5-206ENST00000423982 TRIP13Q15645 432 aaPredicted RBP15.36■□□□□ 0.05
MSH5-206ENST00000423982 VSTM1Q6UX27 236 aa15.36■□□□□ 0.05
MSH5-206ENST00000423982 ARHGEF19Q8IW93 802 aa15.36■□□□□ 0.05
MSH5-206ENST00000423982 TPH2Q8IWU9 490 aa15.36■□□□□ 0.05
MSH5-206ENST00000423982 FITM2Q8N6M3 262 aa15.36■□□□□ 0.05
MSH5-206ENST00000423982 ARHGEF2Q92974 986 aaKnown RBP15.36■□□□□ 0.05
MSH5-206ENST00000423982 MBOAT7Q96N66 472 aa15.36■□□□□ 0.05
MSH5-206ENST00000423982 AGPAT1Q99943 283 aa15.36■□□□□ 0.05
MSH5-206ENST00000423982 AAASQ9NRG9 546 aa15.36■□□□□ 0.05
MSH5-206ENST00000423982 MTRF1LQ9UGC7 380 aaKnown RBP15.36■□□□□ 0.05
MSH5-206ENST00000423982 VAV3Q9UKW4 847 aa15.36■□□□□ 0.05
MSH5-206ENST00000423982 USP15Q9Y4E8 981 aaPredicted RBP15.36■□□□□ 0.05
MSH5-206ENST00000423982 CSADQ9Y600 493 aa15.36■□□□□ 0.05
MSH5-206ENST00000423982 TP73O15350 636 aa15.36■□□□□ 0.05
MSH5-206ENST00000423982 UPP2O95045 317 aa15.36■□□□□ 0.05
MSH5-206ENST00000423982 CTNNA2P26232 953 aa15.36■□□□□ 0.05
MSH5-206ENST00000423982 PEX5P50542 639 aa15.36■□□□□ 0.05
MSH5-206ENST00000423982 MYL7Q01449 175 aa15.36■□□□□ 0.05
MSH5-206ENST00000423982 TNFAIP8L3Q5GJ75 292 aa15.36■□□□□ 0.05
MSH5-206ENST00000423982 NSMFQ6X4W1 530 aa15.36■□□□□ 0.05
MSH5-206ENST00000423982 ZNF280CQ8ND82 737 aa15.36■□□□□ 0.05
MSH5-206ENST00000423982 C1orf54Q8WWF1 131 aa15.36■□□□□ 0.05
MSH5-206ENST00000423982 KLHL29Q96CT2 875 aa15.36■□□□□ 0.05
MSH5-206ENST00000423982 RSRC1Q96IZ7 334 aaKnown RBP15.36■□□□□ 0.05
MSH5-206ENST00000423982 CCDC134Q9H6E4 229 aa15.36■□□□□ 0.05
MSH5-206ENST00000423982 UBE2TQ9NPD8 197 aaPredicted RBP15.36■□□□□ 0.05
MSH5-206ENST00000423982 TBK1Q9UHD2 729 aa15.36■□□□□ 0.05
MSH5-206ENST00000423982 DIS3Q9Y2L1 958 aaKnown RBP15.36■□□□□ 0.05
MSH5-206ENST00000423982 ATP8B3O60423 1300 aa15.35■□□□□ 0.05
MSH5-206ENST00000423982 DLATP10515 647 aaKnown RBP15.35■□□□□ 0.05
MSH5-206ENST00000423982 PDE6CP51160 858 aa15.35■□□□□ 0.05
MSH5-206ENST00000423982 CPXCR1Q8N123 301 aa15.35■□□□□ 0.05
MSH5-206ENST00000423982 ZSWIM2Q8NEG5 633 aa15.35■□□□□ 0.05
MSH5-206ENST00000423982 PCDHB18PQ96TA0 734 aa15.35■□□□□ 0.05
MSH5-206ENST00000423982 PCIF1Q9H4Z3 704 aa15.35■□□□□ 0.05
MSH5-206ENST00000423982 PCYOX1Q9UHG3 505 aa15.35■□□□□ 0.05
MSH5-206ENST00000423982 ZNF112Q9UJU3 913 aa15.35■□□□□ 0.05
MSH5-206ENST00000423982 SNCAIPQ9Y6H5 919 aa15.35■□□□□ 0.05
MSH5-206ENST00000423982 SYNGAP1Q96PV0 1343 aa15.35■□□□□ 0.05
MSH5-206ENST00000423982 RARGP13631 454 aa15.35■□□□□ 0.05
MSH5-206ENST00000423982 COILP38432 576 aaPredicted RBP15.35■□□□□ 0.05
MSH5-206ENST00000423982 MGAT5Q09328 741 aa15.35■□□□□ 0.05
MSH5-206ENST00000423982 RPUSD2Q8IZ73 545 aaKnown RBP15.35■□□□□ 0.05
MSH5-206ENST00000423982 KCNV2Q8TDN2 545 aa15.35■□□□□ 0.05
MSH5-206ENST00000423982 ZC3H15Q8WU90 426 aaKnown RBP15.35■□□□□ 0.05
MSH5-206ENST00000423982 ART4Q93070 314 aa15.35■□□□□ 0.05
MSH5-206ENST00000423982 RPAP3Q9H6T3 665 aaPredicted RBP15.35■□□□□ 0.05
MSH5-206ENST00000423982 HOMER2Q9NSB8 354 aa15.35■□□□□ 0.05
MSH5-206ENST00000423982 PEX10O60683 326 aa15.34■□□□□ 0.05
MSH5-206ENST00000423982 UBXN2AP68543 259 aa15.34■□□□□ 0.05
MSH5-206ENST00000423982 RIPK1Q13546 671 aa15.34■□□□□ 0.05
MSH5-206ENST00000423982 GALNTL6Q49A17 601 aa15.34■□□□□ 0.05
MSH5-206ENST00000423982 NAIF1Q69YI7 327 aaPredicted RBP15.34■□□□□ 0.05
MSH5-206ENST00000423982 CGB2Q6NT52 195 aa15.34■□□□□ 0.05
MSH5-206ENST00000423982 BZW1Q7L1Q6 419 aaKnown RBP15.34■□□□□ 0.05
MSH5-206ENST00000423982 CYP4X1Q8N118 509 aa15.34■□□□□ 0.05
MSH5-206ENST00000423982 WNK4Q96J92 1243 aa15.34■□□□□ 0.05
MSH5-206ENST00000423982 TRIM6Q9C030 488 aaPredicted RBP15.34■□□□□ 0.05
MSH5-206ENST00000423982 NSRP1Q9H0G5 558 aaKnown RBP15.34■□□□□ 0.05
MSH5-206ENST00000423982 AGPAT3Q9NRZ7 376 aa15.34■□□□□ 0.05
MSH5-206ENST00000423982 CFAP73A6NFT4 308 aa15.34■□□□□ 0.05
MSH5-206ENST00000423982 EYA4O95677 639 aa15.34■□□□□ 0.05
MSH5-206ENST00000423982 ALAS1P13196 640 aa15.34■□□□□ 0.05
MSH5-206ENST00000423982 BACE1P56817 501 aa15.34■□□□□ 0.05
MSH5-206ENST00000423982 SIX1Q15475 284 aaPredicted RBP15.34■□□□□ 0.05
MSH5-206ENST00000423982 CRELD2Q6UXH1 353 aaPredicted RBP15.34■□□□□ 0.05
MSH5-206ENST00000423982 UBL4BQ8N7F7 174 aa15.34■□□□□ 0.05
MSH5-206ENST00000423982 ANKLE1Q8NAG6 615 aa15.34■□□□□ 0.05
MSH5-206ENST00000423982 ATG4AQ8WYN0 398 aa15.34■□□□□ 0.05
MSH5-206ENST00000423982 DYDC2Q96IM9 177 aa15.34■□□□□ 0.05
MSH5-206ENST00000423982 FIZ1Q96SL8 496 aa15.34■□□□□ 0.05
MSH5-206ENST00000423982 WRAP73Q9P2S5 460 aaPredicted RBP15.34■□□□□ 0.05
MSH5-206ENST00000423982 CLDN3O15551 220 aa15.33■□□□□ 0.05
MSH5-206ENST00000423982 SGPL1O95470 568 aa15.33■□□□□ 0.05
MSH5-206ENST00000423982 CETPP11597 493 aa15.33■□□□□ 0.05
MSH5-206ENST00000423982 CHRNB2P17787 502 aa15.33■□□□□ 0.05
MSH5-206ENST00000423982 IREB2P48200 963 aaKnown RBP15.33■□□□□ 0.05
MSH5-206ENST00000423982 VPS41P49754 854 aa15.33■□□□□ 0.05
MSH5-206ENST00000423982 COPS2P61201 443 aa15.33■□□□□ 0.05
MSH5-206ENST00000423982 PPP2R5EQ16537 467 aa15.33■□□□□ 0.05
MSH5-206ENST00000423982 PRUNE1Q86TP1 453 aa15.33■□□□□ 0.05
MSH5-206ENST00000423982 LMO3Q8TAP4 145 aa15.33■□□□□ 0.05
MSH5-206ENST00000423982 OLFML3Q9NRN5 406 aa15.33■□□□□ 0.05
MSH5-206ENST00000423982 PODXLO00592 558 aa15.33■□□□□ 0.04
MSH5-206ENST00000423982 IRF6O14896 467 aa15.33■□□□□ 0.04
MSH5-206ENST00000423982 CALCAP01258 141 aa15.33■□□□□ 0.04
MSH5-206ENST00000423982 CCNHP51946 323 aaPredicted RBP15.33■□□□□ 0.04
MSH5-206ENST00000423982 MAP2K1Q02750 393 aaPredicted RBP15.33■□□□□ 0.04
MSH5-206ENST00000423982 RNASELQ05823 741 aaKnown RBP15.33■□□□□ 0.04
MSH5-206ENST00000423982 BNIP1Q12981 228 aa15.33■□□□□ 0.04
MSH5-206ENST00000423982 KIF22Q14807 665 aa15.33■□□□□ 0.04
MSH5-206ENST00000423982 KYNUQ16719 465 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms