RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 CNTN3Q9P232 1028 aa23.62■■□□□ 1.37
SEC22C-207ENST00000423701 MAPK8IP1Q9UQF2 711 aa23.62■■□□□ 1.37
SEC22C-207ENST00000423701 H3BNC9 293 aa23.61■■□□□ 1.37
SEC22C-207ENST00000423701 THP07101 528 aa23.61■■□□□ 1.37
SEC22C-207ENST00000423701 NAB2Q15742 525 aa23.61■■□□□ 1.37
SEC22C-207ENST00000423701 ZNF658Q5TYW1 1059 aaPredicted RBP23.61■■□□□ 1.37
SEC22C-207ENST00000423701 CRELD2Q6UXH1 353 aaPredicted RBP23.61■■□□□ 1.37
SEC22C-207ENST00000423701 HS2ST1Q7LGA3 356 aa23.61■■□□□ 1.37
SEC22C-207ENST00000423701 COLGALT2Q8IYK4 626 aa23.61■■□□□ 1.37
SEC22C-207ENST00000423701 KLHL23Q8NBE8 558 aa23.61■■□□□ 1.37
SEC22C-207ENST00000423701 ZSWIM2Q8NEG5 633 aa23.61■■□□□ 1.37
SEC22C-207ENST00000423701 P2RX5Q93086 422 aa23.61■■□□□ 1.37
SEC22C-207ENST00000423701 PPP1R10Q96QC0 940 aaKnown RBP23.61■■□□□ 1.37
SEC22C-207ENST00000423701 KCTD10Q9H3F6 313 aa23.61■■□□□ 1.37
SEC22C-207ENST00000423701 CLSTN2Q9H4D0 955 aa23.61■■□□□ 1.37
SEC22C-207ENST00000423701 PCIF1Q9H4Z3 704 aa23.61■■□□□ 1.37
SEC22C-207ENST00000423701 RPF1Q9H9Y2 349 aaKnown RBP23.61■■□□□ 1.37
SEC22C-207ENST00000423701 MAN1B1Q9UKM7 699 aa23.61■■□□□ 1.37
SEC22C-207ENST00000423701 TRANK1O15050 2925 aa23.61■■□□□ 1.37
SEC22C-207ENST00000423701 TRIP11Q15643 1979 aa23.6■■□□□ 1.37
SEC22C-207ENST00000423701 SMIM28A0A1B0GU29 152 aa23.6■■□□□ 1.37
SEC22C-207ENST00000423701 TTC26A0AVF1 554 aa23.6■■□□□ 1.37
SEC22C-207ENST00000423701 LPXNO60711 386 aa23.6■■□□□ 1.37
SEC22C-207ENST00000423701 KIF20AO95235 890 aa23.6■■□□□ 1.37
SEC22C-207ENST00000423701 GALTP07902 379 aa23.6■■□□□ 1.37
SEC22C-207ENST00000423701 SLC11A1P49279 550 aa23.6■■□□□ 1.37
SEC22C-207ENST00000423701 ALDH7A1P49419 539 aaKnown RBP23.6■■□□□ 1.37
SEC22C-207ENST00000423701 SNRPFP62306 86 aaKnown RBP23.6■■□□□ 1.37
SEC22C-207ENST00000423701 GPM6BQ13491 265 aa23.6■■□□□ 1.37
SEC22C-207ENST00000423701 GUF1Q8N442 669 aaKnown RBP23.6■■□□□ 1.37
SEC22C-207ENST00000423701 ZMAT2Q96NC0 199 aaKnown RBP23.6■■□□□ 1.37
SEC22C-207ENST00000423701 CDX2Q99626 313 aaPredicted RBP23.6■■□□□ 1.37
SEC22C-207ENST00000423701 FAM213AQ9BRX8 229 aa23.6■■□□□ 1.37
SEC22C-207ENST00000423701 TMEM175Q9BSA9 504 aa23.6■■□□□ 1.37
SEC22C-207ENST00000423701 PLEKHA5Q9HAU0 1116 aa23.6■■□□□ 1.37
SEC22C-207ENST00000423701 PDCD11Q14690 1871 aaKnown RBP23.59■■□□□ 1.37
SEC22C-207ENST00000423701 PLXNA4Q9HCM2 1894 aa23.59■■□□□ 1.37
SEC22C-207ENST00000423701 NT5C1B-RDH14C9J2C7 533 aa23.59■■□□□ 1.37
SEC22C-207ENST00000423701 KIAA0391O15091 583 aaKnown RBP23.59■■□□□ 1.37
SEC22C-207ENST00000423701 CLIC2O15247 247 aa23.59■■□□□ 1.37
SEC22C-207ENST00000423701 KCNE1P15382 129 aa23.59■■□□□ 1.37
SEC22C-207ENST00000423701 PPP2R3AQ06190 1150 aa23.59■■□□□ 1.37
SEC22C-207ENST00000423701 TUSC3Q13454 348 aa23.59■■□□□ 1.37
SEC22C-207ENST00000423701 TMEM173Q86WV6 379 aaPredicted RBP23.59■■□□□ 1.37
SEC22C-207ENST00000423701 SLC39A11Q8N1S5 342 aa23.59■■□□□ 1.37
SEC22C-207ENST00000423701 HSPBP1Q9NZL4 362 aa23.59■■□□□ 1.37
SEC22C-207ENST00000423701 CGNQ9P2M7 1197 aaKnown RBP23.59■■□□□ 1.37
SEC22C-207ENST00000423701 GOLGA8IPA6NC78 632 aa23.58■■□□□ 1.37
SEC22C-207ENST00000423701 GOLGA8JA6NMD2 632 aa23.58■■□□□ 1.37
SEC22C-207ENST00000423701 EXTL3O43909 919 aa23.58■■□□□ 1.37
SEC22C-207ENST00000423701 FGF18O76093 207 aa23.58■■□□□ 1.37
SEC22C-207ENST00000423701 LDHAP00338 332 aaKnown RBP23.58■■□□□ 1.37
SEC22C-207ENST00000423701 ITGB1P05556 798 aa23.58■■□□□ 1.37
SEC22C-207ENST00000423701 PPM1AP35813 382 aa23.58■■□□□ 1.37
SEC22C-207ENST00000423701 ISM2Q6H9L7 571 aa23.58■■□□□ 1.37
SEC22C-207ENST00000423701 GPD1LQ8N335 351 aa23.58■■□□□ 1.37
SEC22C-207ENST00000423701 GOLGA5Q8TBA6 731 aa23.58■■□□□ 1.37
SEC22C-207ENST00000423701 MYLIPQ8WY64 445 aa23.58■■□□□ 1.37
SEC22C-207ENST00000423701 NUP62CLQ9H1M0 184 aa23.58■■□□□ 1.37
SEC22C-207ENST00000423701 ALG13Q9NP73 1137 aaKnown RBP23.58■■□□□ 1.37
SEC22C-207ENST00000423701 SPG21Q9NZD8 308 aa23.58■■□□□ 1.37
SEC22C-207ENST00000423701 KIAA1468Q9P260 1216 aa23.58■■□□□ 1.37
SEC22C-207ENST00000423701 CACNG4Q9UBN1 327 aa23.58■■□□□ 1.37
SEC22C-207ENST00000423701 LACTBL1A8MY62 500 aa23.57■■□□□ 1.36
SEC22C-207ENST00000423701 ADRB2P07550 413 aa23.57■■□□□ 1.36
SEC22C-207ENST00000423701 MCM4P33991 863 aa23.57■■□□□ 1.36
SEC22C-207ENST00000423701 ADGRE1Q14246 886 aa23.57■■□□□ 1.36
SEC22C-207ENST00000423701 COBLL1Q53SF7 1204 aa23.57■■□□□ 1.36
SEC22C-207ENST00000423701 C12orf56Q8IXR9 622 aa23.57■■□□□ 1.36
SEC22C-207ENST00000423701 NOC3LQ8WTT2 800 aaKnown RBP23.57■■□□□ 1.36
SEC22C-207ENST00000423701 GTPBP4Q9BZE4 634 aaKnown RBP23.57■■□□□ 1.36
SEC22C-207ENST00000423701 ANK1P16157 1881 aa23.57■■□□□ 1.36
SEC22C-207ENST00000423701 CARNS1A5YM72 827 aa23.56■■□□□ 1.36
SEC22C-207ENST00000423701 CASTOR2A6NHX0 329 aa23.56■■□□□ 1.36
SEC22C-207ENST00000423701 BIN1O00499 593 aa23.56■■□□□ 1.36
SEC22C-207ENST00000423701 PDXKO00764 312 aa23.56■■□□□ 1.36
SEC22C-207ENST00000423701 NRP1O14786 923 aa23.56■■□□□ 1.36
SEC22C-207ENST00000423701 GRM6O15303 877 aa23.56■■□□□ 1.36
SEC22C-207ENST00000423701 ALDH2P05091 517 aa23.56■■□□□ 1.36
SEC22C-207ENST00000423701 BMP6P22004 513 aa23.56■■□□□ 1.36
SEC22C-207ENST00000423701 PRCPP42785 496 aa23.56■■□□□ 1.36
SEC22C-207ENST00000423701 OR1G1P47890 313 aa23.56■■□□□ 1.36
SEC22C-207ENST00000423701 CYP2J2P51589 502 aa23.56■■□□□ 1.36
SEC22C-207ENST00000423701 POU5F1Q01860 360 aaKnown RBP23.56■■□□□ 1.36
SEC22C-207ENST00000423701 SPAG1Q07617 926 aa23.56■■□□□ 1.36
SEC22C-207ENST00000423701 MORC3Q14149 939 aa23.56■■□□□ 1.36
SEC22C-207ENST00000423701 BCL7CQ8WUZ0 217 aaPredicted RBP23.56■■□□□ 1.36
SEC22C-207ENST00000423701 FAM212AQ96EL1 285 aa23.56■■□□□ 1.36
SEC22C-207ENST00000423701 RBAKQ9NYW8 714 aaPredicted RBP23.56■■□□□ 1.36
SEC22C-207ENST00000423701 FAN1Q9Y2M0 1017 aa23.56■■□□□ 1.36
SEC22C-207ENST00000423701 PRG3Q9Y2Y8 225 aaPredicted RBP23.56■■□□□ 1.36
SEC22C-207ENST00000423701 MBD3O95983 291 aa23.56■■□□□ 1.36
SEC22C-207ENST00000423701 PLCB3Q01970 1234 aa23.56■■□□□ 1.36
SEC22C-207ENST00000423701 SOX4Q06945 474 aaPredicted RBP23.56■■□□□ 1.36
SEC22C-207ENST00000423701 BRSK2Q8IWQ3 736 aa23.56■■□□□ 1.36
SEC22C-207ENST00000423701 CD302Q8IX05 232 aa23.56■■□□□ 1.36
SEC22C-207ENST00000423701 SPPL3Q8TCT6 385 aa23.56■■□□□ 1.36
SEC22C-207ENST00000423701 C18orf25Q96B23 403 aaPredicted RBP23.56■■□□□ 1.36
SEC22C-207ENST00000423701 IGSF21Q96ID5 467 aa23.56■■□□□ 1.36
SEC22C-207ENST00000423701 FBXL18Q96ME1 805 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms