RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 POLIQ9UNA4 740 aa18.58■□□□□ 0.57
CHCHD3-202ENST00000423635 NOTCH4Q99466 2003 aa18.58■□□□□ 0.56
CHCHD3-202ENST00000423635 ADAM12O43184 909 aa18.57■□□□□ 0.56
CHCHD3-202ENST00000423635 B4GALT5O43286 388 aa18.57■□□□□ 0.56
CHCHD3-202ENST00000423635 SLITRK3O94933 977 aa18.57■□□□□ 0.56
CHCHD3-202ENST00000423635 NPTXRO95502 500 aa18.57■□□□□ 0.56
CHCHD3-202ENST00000423635 ADCY1Q08828 1119 aa18.57■□□□□ 0.56
CHCHD3-202ENST00000423635 SPIRE1Q08AE8 756 aa18.57■□□□□ 0.56
CHCHD3-202ENST00000423635 ELAVL2Q12926 359 aaKnown RBP18.57■□□□□ 0.56
CHCHD3-202ENST00000423635 CTTNQ14247 550 aaKnown RBP18.57■□□□□ 0.56
CHCHD3-202ENST00000423635 AXDND1Q5T1B0 1012 aaPredicted RBP18.57■□□□□ 0.56
CHCHD3-202ENST00000423635 TPRG1Q6ZUI0 275 aa18.57■□□□□ 0.56
CHCHD3-202ENST00000423635 CEP57Q86XR8 500 aa18.57■□□□□ 0.56
CHCHD3-202ENST00000423635 ASAP3Q8TDY4 903 aa18.57■□□□□ 0.56
CHCHD3-202ENST00000423635 PARD6AQ9NPB6 346 aa18.57■□□□□ 0.56
CHCHD3-202ENST00000423635 CACNG4Q9UBN1 327 aa18.57■□□□□ 0.56
CHCHD3-202ENST00000423635 MRPS17Q9Y2R5 130 aaKnown RBP18.57■□□□□ 0.56
CHCHD3-202ENST00000423635 DGAT1O75907 488 aa18.56■□□□□ 0.56
CHCHD3-202ENST00000423635 KIF4AO95239 1232 aa18.56■□□□□ 0.56
CHCHD3-202ENST00000423635 GLRA2P23416 452 aa18.56■□□□□ 0.56
CHCHD3-202ENST00000423635 PABPC1LQ4VXU2 614 aaKnown RBP18.56■□□□□ 0.56
CHCHD3-202ENST00000423635 NEK8Q86SG6 692 aa18.56■□□□□ 0.56
CHCHD3-202ENST00000423635 CDR2LQ86X02 465 aaPredicted RBP18.56■□□□□ 0.56
CHCHD3-202ENST00000423635 ZNF687Q8N1G0 1237 aa18.56■□□□□ 0.56
CHCHD3-202ENST00000423635 SLC7A14Q8TBB6 771 aa18.56■□□□□ 0.56
CHCHD3-202ENST00000423635 HASPINQ8TF76 798 aa18.56■□□□□ 0.56
CHCHD3-202ENST00000423635 PLA2G2FQ9BZM2 168 aa18.56■□□□□ 0.56
CHCHD3-202ENST00000423635 AVENQ9NQS1 362 aaPredicted RBP18.56■□□□□ 0.56
CHCHD3-202ENST00000423635 HCFC1R1Q9NWW0 138 aa18.56■□□□□ 0.56
CHCHD3-202ENST00000423635 GDE1Q9NZC3 331 aa18.56■□□□□ 0.56
CHCHD3-202ENST00000423635 GMEB2Q9UKD1 530 aa18.56■□□□□ 0.56
CHCHD3-202ENST00000423635 USP18Q9UMW8 372 aa18.56■□□□□ 0.56
CHCHD3-202ENST00000423635 LYPLA2O95372 231 aa18.55■□□□□ 0.56
CHCHD3-202ENST00000423635 TDGF1P13385 188 aa18.55■□□□□ 0.56
CHCHD3-202ENST00000423635 MTAPQ13126 283 aa18.55■□□□□ 0.56
CHCHD3-202ENST00000423635 NAB2Q15742 525 aa18.55■□□□□ 0.56
CHCHD3-202ENST00000423635 TPH2Q8IWU9 490 aa18.55■□□□□ 0.56
CHCHD3-202ENST00000423635 HSD17B14Q9BPX1 270 aa18.55■□□□□ 0.56
CHCHD3-202ENST00000423635 HEBP1Q9NRV9 189 aa18.55■□□□□ 0.56
CHCHD3-202ENST00000423635 ANKEF1Q9NU02 776 aa18.55■□□□□ 0.56
CHCHD3-202ENST00000423635 CASTOR2A6NHX0 329 aa18.54■□□□□ 0.56
CHCHD3-202ENST00000423635 PTGESO14684 152 aa18.54■□□□□ 0.56
CHCHD3-202ENST00000423635 CDC45O75419 566 aa18.54■□□□□ 0.56
CHCHD3-202ENST00000423635 THP07101 528 aa18.54■□□□□ 0.56
CHCHD3-202ENST00000423635 PSMA5P28066 241 aa18.54■□□□□ 0.56
CHCHD3-202ENST00000423635 OR1D2P34982 312 aa18.54■□□□□ 0.56
CHCHD3-202ENST00000423635 NRLP54845 237 aa18.54■□□□□ 0.56
CHCHD3-202ENST00000423635 CYP4A11Q02928 519 aa18.54■□□□□ 0.56
CHCHD3-202ENST00000423635 ST3GAL2Q16842 350 aa18.54■□□□□ 0.56
CHCHD3-202ENST00000423635 NCAPH2Q6IBW4 605 aa18.54■□□□□ 0.56
CHCHD3-202ENST00000423635 POTEHQ6S545 545 aa18.54■□□□□ 0.56
CHCHD3-202ENST00000423635 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.54■□□□□ 0.56
CHCHD3-202ENST00000423635 PPP4R3CPQ6ZMV5 832 aa18.54■□□□□ 0.56
CHCHD3-202ENST00000423635 CELF5Q8N6W0 485 aaKnown RBP18.54■□□□□ 0.56
CHCHD3-202ENST00000423635 DNASE1L2Q92874 299 aa18.54■□□□□ 0.56
CHCHD3-202ENST00000423635 ELSPBP1Q96BH3 223 aa18.54■□□□□ 0.56
CHCHD3-202ENST00000423635 PRIMPOLQ96LW4 560 aa18.54■□□□□ 0.56
CHCHD3-202ENST00000423635 AIFM3Q96NN9 605 aa18.54■□□□□ 0.56
CHCHD3-202ENST00000423635 NAP1L4Q99733 375 aaKnown RBP18.54■□□□□ 0.56
CHCHD3-202ENST00000423635 MRPS23Q9Y3D9 190 aaKnown RBP18.54■□□□□ 0.56
CHCHD3-202ENST00000423635 CCDC194A0A1B0GVG4 234 aa18.53■□□□□ 0.56
CHCHD3-202ENST00000423635 MAN2B1O00754 1011 aa18.53■□□□□ 0.56
CHCHD3-202ENST00000423635 MARCH6O60337 910 aa18.53■□□□□ 0.56
CHCHD3-202ENST00000423635 CCNT1O60563 726 aaKnown RBP18.53■□□□□ 0.56
CHCHD3-202ENST00000423635 FGFR3P22607 806 aa18.53■□□□□ 0.56
CHCHD3-202ENST00000423635 TOB2Q14106 344 aaPredicted RBP18.53■□□□□ 0.56
CHCHD3-202ENST00000423635 SLFN12Q8IYM2 578 aa18.53■□□□□ 0.56
CHCHD3-202ENST00000423635 MCRS1Q96EZ8 462 aa18.53■□□□□ 0.56
CHCHD3-202ENST00000423635 IER2Q9BTL4 223 aa18.53■□□□□ 0.56
CHCHD3-202ENST00000423635 CHRDQ9H2X0 955 aa18.53■□□□□ 0.56
CHCHD3-202ENST00000423635 MTRRQ9UBK8 725 aa18.53■□□□□ 0.56
CHCHD3-202ENST00000423635 KCNJ14Q9UNX9 436 aa18.53■□□□□ 0.56
CHCHD3-202ENST00000423635 ARID2Q68CP9 1835 aa18.53■□□□□ 0.56
CHCHD3-202ENST00000423635 CPLX1O14810 134 aa18.52■□□□□ 0.56
CHCHD3-202ENST00000423635 SLC30A4O14863 429 aa18.52■□□□□ 0.56
CHCHD3-202ENST00000423635 LRP3O75074 770 aa18.52■□□□□ 0.56
CHCHD3-202ENST00000423635 RHOP08100 348 aa18.52■□□□□ 0.56
CHCHD3-202ENST00000423635 FAM187BQ17R55 369 aa18.52■□□□□ 0.56
CHCHD3-202ENST00000423635 LAIR1Q6GTX8 287 aa18.52■□□□□ 0.56
CHCHD3-202ENST00000423635 TANGO2Q6ICL3 276 aa18.52■□□□□ 0.56
CHCHD3-202ENST00000423635 NETO1Q8TDF5 533 aa18.52■□□□□ 0.56
CHCHD3-202ENST00000423635 ING5Q8WYH8 240 aa18.52■□□□□ 0.56
CHCHD3-202ENST00000423635 ZNF274Q96GC6 653 aaPredicted RBP18.52■□□□□ 0.56
CHCHD3-202ENST00000423635 YTHDC1Q96MU7 727 aaKnown RBP18.52■□□□□ 0.56
CHCHD3-202ENST00000423635 EIF2AK1Q9BQI3 630 aaKnown RBP18.52■□□□□ 0.56
CHCHD3-202ENST00000423635 FZD8Q9H461 694 aa18.52■□□□□ 0.56
CHCHD3-202ENST00000423635 PRMT7Q9NVM4 692 aaPredicted RBP18.52■□□□□ 0.56
CHCHD3-202ENST00000423635 BACE2Q9Y5Z0 518 aa18.52■□□□□ 0.56
CHCHD3-202ENST00000423635 TMEM189-UBE2V1I3L0A0 370 aa18.51■□□□□ 0.55
CHCHD3-202ENST00000423635 BAG4O95429 457 aaKnown RBP18.51■□□□□ 0.55
CHCHD3-202ENST00000423635 RETP07949 1114 aa18.51■□□□□ 0.55
CHCHD3-202ENST00000423635 RARRES1P49788 294 aa18.51■□□□□ 0.55
CHCHD3-202ENST00000423635 SPEM2Q0P670 501 aa18.51■□□□□ 0.55
CHCHD3-202ENST00000423635 SLC5A9Q2M3M2 681 aa18.51■□□□□ 0.55
CHCHD3-202ENST00000423635 POTEDQ86YR6 584 aa18.51■□□□□ 0.55
CHCHD3-202ENST00000423635 CXCL16Q9H2A7 254 aa18.51■□□□□ 0.55
CHCHD3-202ENST00000423635 TRPV5Q9NQA5 729 aa18.51■□□□□ 0.55
CHCHD3-202ENST00000423635 SNTG2Q9NY99 539 aa18.51■□□□□ 0.55
CHCHD3-202ENST00000423635 RAB23Q9ULC3 237 aa18.51■□□□□ 0.55
CHCHD3-202ENST00000423635 CFAP47Q6ZTR5 3102 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms