RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 SLC28A3Q9HAS3 691 aa10.11□□□□□ -0.79
PDGFC-202ENST00000422544 TBC1D13Q9NVG8 400 aa10.11□□□□□ -0.79
PDGFC-202ENST00000422544 MRPL42Q9Y6G3 142 aaKnown RBP10.11□□□□□ -0.79
PDGFC-202ENST00000422544 MYH11P35749 1972 aa10.1□□□□□ -0.79
PDGFC-202ENST00000422544 PTGESO14684 152 aa10.1□□□□□ -0.79
PDGFC-202ENST00000422544 EXTL3O43909 919 aa10.1□□□□□ -0.79
PDGFC-202ENST00000422544 CXCL8P10145 99 aa10.1□□□□□ -0.79
PDGFC-202ENST00000422544 CD44P16070 742 aaKnown RBP10.1□□□□□ -0.79
PDGFC-202ENST00000422544 PLA2G5P39877 138 aa10.1□□□□□ -0.79
PDGFC-202ENST00000422544 CYP2J2P51589 502 aa10.1□□□□□ -0.79
PDGFC-202ENST00000422544 SNRPFP62306 86 aaKnown RBP10.1□□□□□ -0.79
PDGFC-202ENST00000422544 RNASELQ05823 741 aaKnown RBP10.1□□□□□ -0.79
PDGFC-202ENST00000422544 ENOX2Q16206 610 aaKnown RBP10.1□□□□□ -0.79
PDGFC-202ENST00000422544 KYAT1Q16773 422 aa10.1□□□□□ -0.79
PDGFC-202ENST00000422544 GLRA4Q5JXX5 417 aa10.1□□□□□ -0.79
PDGFC-202ENST00000422544 CRELD2Q6UXH1 353 aaPredicted RBP10.1□□□□□ -0.79
PDGFC-202ENST00000422544 ALKAL1Q6UXT8 129 aa10.1□□□□□ -0.79
PDGFC-202ENST00000422544 ZNF280BQ86YH2 543 aa10.1□□□□□ -0.79
PDGFC-202ENST00000422544 ADSSL1Q8N142 457 aa10.1□□□□□ -0.79
PDGFC-202ENST00000422544 LRRC43Q8N309 656 aa10.1□□□□□ -0.79
PDGFC-202ENST00000422544 GOLGA5Q8TBA6 731 aa10.1□□□□□ -0.79
PDGFC-202ENST00000422544 FAM212AQ96EL1 285 aa10.1□□□□□ -0.79
PDGFC-202ENST00000422544 RPS6KC1Q96S38 1066 aa10.1□□□□□ -0.79
PDGFC-202ENST00000422544 C17orf80Q9BSJ5 609 aa10.1□□□□□ -0.79
PDGFC-202ENST00000422544 GTPBP4Q9BZE4 634 aaKnown RBP10.1□□□□□ -0.79
PDGFC-202ENST00000422544 CWH43Q9H720 699 aa10.1□□□□□ -0.79
PDGFC-202ENST00000422544 NRDE2Q9H7Z3 1164 aa10.1□□□□□ -0.79
PDGFC-202ENST00000422544 RPF1Q9H9Y2 349 aaKnown RBP10.1□□□□□ -0.79
PDGFC-202ENST00000422544 TOPORSQ9NS56 1045 aaPredicted RBP10.1□□□□□ -0.79
PDGFC-202ENST00000422544 HSPBP1Q9NZL4 362 aa10.1□□□□□ -0.79
PDGFC-202ENST00000422544 KANSL3Q9P2N6 904 aa10.1□□□□□ -0.79
PDGFC-202ENST00000422544 CPSF3Q9UKF6 684 aaKnown RBP10.1□□□□□ -0.79
PDGFC-202ENST00000422544 MTUS1Q9ULD2 1270 aa10.1□□□□□ -0.79
PDGFC-202ENST00000422544 PLAGL2Q9UPG8 496 aa10.1□□□□□ -0.79
PDGFC-202ENST00000422544 SMIM28A0A1B0GU29 152 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 LACTBL1A8MY62 500 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 PPP1R3GB7ZBB8 358 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 TNFRSF10AO00220 468 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 PDXKO00764 312 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 INPPL1O15357 1258 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 CALUO43852 315 aaPredicted RBP10.09□□□□□ -0.79
PDGFC-202ENST00000422544 B4GALT3O60512 393 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 DDHD2O94830 711 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 LDHAP00338 332 aaKnown RBP10.09□□□□□ -0.79
PDGFC-202ENST00000422544 LINC00271P0C7V0 271 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 PBX3P40426 434 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 ERVK-21P61565 698 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 SPAG1Q07617 926 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 STIM1Q13586 685 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 COBLL1Q53SF7 1204 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 XKR4Q5GH76 650 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 CCDC183Q5T5S1 534 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 KLHL10Q6JEL2 608 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 CBWD2Q8IUF1 395 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 C12orf56Q8IXR9 622 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 GPD1LQ8N335 351 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 TRIML1Q8N9V2 468 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 XXYLT1Q8NBI6 393 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 RDH13Q8NBN7 331 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 ARNTL2Q8WYA1 636 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 CLP1Q92989 425 aaKnown RBP10.09□□□□□ -0.79
PDGFC-202ENST00000422544 SNX27Q96L92 541 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 ZMAT2Q96NC0 199 aaKnown RBP10.09□□□□□ -0.79
PDGFC-202ENST00000422544 FAM193BQ96PV7 902 aaPredicted RBP10.09□□□□□ -0.79
PDGFC-202ENST00000422544 TGS1Q96RS0 853 aaKnown RBP10.09□□□□□ -0.79
PDGFC-202ENST00000422544 MRPL9Q9BYD2 267 aaKnown RBP10.09□□□□□ -0.79
PDGFC-202ENST00000422544 ZNF576Q9H609 170 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 PLEKHA5Q9HAU0 1116 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 TMEM63CQ9P1W3 806 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 CGNQ9P2M7 1197 aaKnown RBP10.09□□□□□ -0.79
PDGFC-202ENST00000422544 TRAF3IP3Q9Y228 551 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 CFAP54Q96N23 3096 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 PTPRSQ13332 1948 aa10.09□□□□□ -0.79
PDGFC-202ENST00000422544 TTC26A0AVF1 554 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 ZNF233A6NK53 670 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 KIAA0391O15091 583 aaKnown RBP10.08□□□□□ -0.8
PDGFC-202ENST00000422544 EXOC3O60645 756 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 ZC3H11AO75152 810 aaKnown RBP eCLIP10.08□□□□□ -0.8
PDGFC-202ENST00000422544 NR3C1P04150 777 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 ALDH2P05091 517 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 THP07101 528 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 GALTP07902 379 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 KCNE1P15382 129 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 FOSL2P15408 326 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 PTMSP20962 102 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 CTNNB1P35222 781 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 BMPR1AP36894 532 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 PMS1P54277 932 aaKnown RBP10.08□□□□□ -0.8
PDGFC-202ENST00000422544 WNT7BP56706 349 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 BCAR1P56945 870 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 GRIK3Q13003 919 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 ADGRE1Q14246 886 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 NFKBIBQ15653 356 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 EPC2Q52LR7 807 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 TJAP1Q5JTD0 557 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 ANKRD40Q6AI12 368 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 CENPPQ6IPU0 288 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 CAVIN1Q6NZI2 390 aaKnown RBP10.08□□□□□ -0.8
PDGFC-202ENST00000422544 RSPH1Q8WYR4 309 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 RABGGTAQ92696 567 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms