RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 ERMP1Q7Z2K6 904 aa14.26□□□□□ -0.13
LINC00339-203ENST00000420503 C1orf210Q8IVY1 113 aa14.26□□□□□ -0.13
LINC00339-203ENST00000420503 SLFN12Q8IYM2 578 aa14.26□□□□□ -0.13
LINC00339-203ENST00000420503 TMEM130Q8N3G9 435 aa14.26□□□□□ -0.13
LINC00339-203ENST00000420503 SLC7A14Q8TBB6 771 aa14.26□□□□□ -0.13
LINC00339-203ENST00000420503 HDAC7Q8WUI4 952 aa14.26□□□□□ -0.13
LINC00339-203ENST00000420503 PIK3R5Q8WYR1 880 aa14.26□□□□□ -0.13
LINC00339-203ENST00000420503 HINFPQ9BQA5 517 aa14.26□□□□□ -0.13
LINC00339-203ENST00000420503 TTPALQ9BTX7 342 aa14.26□□□□□ -0.13
LINC00339-203ENST00000420503 PLA2G2FQ9BZM2 168 aa14.26□□□□□ -0.13
LINC00339-203ENST00000420503 GOLGA2P5Q9HBQ8 144 aa14.26□□□□□ -0.13
LINC00339-203ENST00000420503 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.26□□□□□ -0.13
LINC00339-203ENST00000420503 ANKEF1Q9NU02 776 aa14.26□□□□□ -0.13
LINC00339-203ENST00000420503 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.26□□□□□ -0.13
LINC00339-203ENST00000420503 CDH7Q9ULB5 785 aa14.26□□□□□ -0.13
LINC00339-203ENST00000420503 PCDHA12Q9UN75 941 aa14.26□□□□□ -0.13
LINC00339-203ENST00000420503 CACNA1BQ00975 2339 aa14.25□□□□□ -0.13
LINC00339-203ENST00000420503 SHISA7A6NL88 538 aa14.25□□□□□ -0.13
LINC00339-203ENST00000420503 NR1I2O75469 434 aa14.25□□□□□ -0.13
LINC00339-203ENST00000420503 ATP2B1P20020 1258 aa14.25□□□□□ -0.13
LINC00339-203ENST00000420503 STARD6P59095 220 aa14.25□□□□□ -0.13
LINC00339-203ENST00000420503 POU5F1BQ06416 359 aa14.25□□□□□ -0.13
LINC00339-203ENST00000420503 SLC5A9Q2M3M2 681 aa14.25□□□□□ -0.13
LINC00339-203ENST00000420503 PPM1LQ5SGD2 360 aa14.25□□□□□ -0.13
LINC00339-203ENST00000420503 CDCA2Q69YH5 1023 aaPredicted RBP14.25□□□□□ -0.13
LINC00339-203ENST00000420503 TSSK4Q6SA08 328 aa14.25□□□□□ -0.13
LINC00339-203ENST00000420503 NPAS3Q8IXF0 933 aa14.25□□□□□ -0.13
LINC00339-203ENST00000420503 FAM177A1Q8N128 213 aaPredicted RBP14.25□□□□□ -0.13
LINC00339-203ENST00000420503 SUMF1Q8NBK3 374 aa14.25□□□□□ -0.13
LINC00339-203ENST00000420503 C3orf58Q8NDZ4 430 aa14.25□□□□□ -0.13
LINC00339-203ENST00000420503 MTMR9Q96QG7 549 aa14.25□□□□□ -0.13
LINC00339-203ENST00000420503 NFKBIZQ9BYH8 718 aa14.25□□□□□ -0.13
LINC00339-203ENST00000420503 FZD8Q9H461 694 aa14.25□□□□□ -0.13
LINC00339-203ENST00000420503 DNMT3BQ9UBC3 853 aaKnown RBP14.25□□□□□ -0.13
LINC00339-203ENST00000420503 GDAQ9Y2T3 454 aa14.25□□□□□ -0.13
LINC00339-203ENST00000420503 CDKL5O76039 1030 aa14.24□□□□□ -0.13
LINC00339-203ENST00000420503 BAG4O95429 457 aaKnown RBP14.24□□□□□ -0.13
LINC00339-203ENST00000420503 CENPBP07199 599 aaPredicted RBP14.24□□□□□ -0.13
LINC00339-203ENST00000420503 OR1D2P34982 312 aa14.24□□□□□ -0.13
LINC00339-203ENST00000420503 NCBP1Q09161 790 aaKnown RBP14.24□□□□□ -0.13
LINC00339-203ENST00000420503 UBXN2BQ14CS0 331 aa14.24□□□□□ -0.13
LINC00339-203ENST00000420503 PCBP1Q15365 356 aaKnown RBP eCLIP14.24□□□□□ -0.13
LINC00339-203ENST00000420503 MLF2Q15773 248 aaPredicted RBP14.24□□□□□ -0.13
LINC00339-203ENST00000420503 ME3Q16798 604 aa14.24□□□□□ -0.13
LINC00339-203ENST00000420503 ELMSAN1Q6PJG2 1045 aa14.24□□□□□ -0.13
LINC00339-203ENST00000420503 PPP4R3CPQ6ZMV5 832 aa14.24□□□□□ -0.13
LINC00339-203ENST00000420503 CATSPER3Q86XQ3 398 aa14.24□□□□□ -0.13
LINC00339-203ENST00000420503 CEP120Q8N960 986 aa14.24□□□□□ -0.13
LINC00339-203ENST00000420503 NXPE3Q969Y0 559 aa14.24□□□□□ -0.13
LINC00339-203ENST00000420503 CCDC43Q96MW1 224 aaKnown RBP14.24□□□□□ -0.13
LINC00339-203ENST00000420503 DDX23Q9BUQ8 820 aaKnown RBP14.24□□□□□ -0.13
LINC00339-203ENST00000420503 CCDC113Q9H0I3 377 aa14.24□□□□□ -0.13
LINC00339-203ENST00000420503 DPP7Q9UHL4 492 aa14.24□□□□□ -0.13
LINC00339-203ENST00000420503 NEMFO60524 1076 aa14.23□□□□□ -0.13
LINC00339-203ENST00000420503 TARSP26639 723 aaKnown RBP14.23□□□□□ -0.13
LINC00339-203ENST00000420503 TKTP29401 623 aaKnown RBP14.23□□□□□ -0.13
LINC00339-203ENST00000420503 BRCC3P46736 316 aa14.23□□□□□ -0.13
LINC00339-203ENST00000420503 GUCY1B3Q02153 619 aa14.23□□□□□ -0.13
LINC00339-203ENST00000420503 SOX4Q06945 474 aaPredicted RBP14.23□□□□□ -0.13
LINC00339-203ENST00000420503 ECM1Q16610 540 aa14.23□□□□□ -0.13
LINC00339-203ENST00000420503 SLC44A4Q53GD3 710 aa14.23□□□□□ -0.13
LINC00339-203ENST00000420503 AXDND1Q5T1B0 1012 aaPredicted RBP14.23□□□□□ -0.13
LINC00339-203ENST00000420503 LIN9Q5TKA1 542 aa14.23□□□□□ -0.13
LINC00339-203ENST00000420503 DGLUCYQ7Z3D6 616 aa14.23□□□□□ -0.13
LINC00339-203ENST00000420503 DIS3L2Q8IYB7 885 aaKnown RBP14.23□□□□□ -0.13
LINC00339-203ENST00000420503 HACE1Q8IYU2 909 aa14.23□□□□□ -0.13
LINC00339-203ENST00000420503 NSUN7Q8NE18 718 aaKnown RBP14.23□□□□□ -0.13
LINC00339-203ENST00000420503 SPATA6Q9NWH7 488 aaPredicted RBP14.23□□□□□ -0.13
LINC00339-203ENST00000420503 KANSL1LA0AUZ9 987 aa14.22□□□□□ -0.13
LINC00339-203ENST00000420503 PRKCBP05771 671 aa14.22□□□□□ -0.13
LINC00339-203ENST00000420503 CEBPBP17676 345 aa14.22□□□□□ -0.13
LINC00339-203ENST00000420503 FGFR3P22607 806 aa14.22□□□□□ -0.13
LINC00339-203ENST00000420503 MCM7P33993 719 aa14.22□□□□□ -0.13
LINC00339-203ENST00000420503 CLCNKBP51801 687 aa14.22□□□□□ -0.13
LINC00339-203ENST00000420503 PRPF4BQ13523 1007 aaKnown RBP14.22□□□□□ -0.13
LINC00339-203ENST00000420503 NT5DC1Q5TFE4 455 aa14.22□□□□□ -0.13
LINC00339-203ENST00000420503 GPR65Q8IYL9 337 aa14.22□□□□□ -0.13
LINC00339-203ENST00000420503 MCRS1Q96EZ8 462 aa14.22□□□□□ -0.13
LINC00339-203ENST00000420503 DDX27Q96GQ7 796 aaKnown RBP14.22□□□□□ -0.13
LINC00339-203ENST00000420503 NAP1L4Q99733 375 aaKnown RBP14.22□□□□□ -0.13
LINC00339-203ENST00000420503 LTB4R2Q9NPC1 389 aa14.22□□□□□ -0.13
LINC00339-203ENST00000420503 PRMT7Q9NVM4 692 aaPredicted RBP14.22□□□□□ -0.13
LINC00339-203ENST00000420503 CDY1Q9Y6F8 540 aa14.22□□□□□ -0.13
LINC00339-203ENST00000420503 EPG5Q9HCE0 2579 aa14.22□□□□□ -0.13
LINC00339-203ENST00000420503 ZMYM2Q9UBW7 1377 aa14.22□□□□□ -0.13
LINC00339-203ENST00000420503 NCANO14594 1321 aa14.21□□□□□ -0.13
LINC00339-203ENST00000420503 FAM170BA6NMN3 283 aa14.21□□□□□ -0.13
LINC00339-203ENST00000420503 MEFVO15553 781 aaPredicted RBP14.21□□□□□ -0.13
LINC00339-203ENST00000420503 THP07101 528 aa14.21□□□□□ -0.13
LINC00339-203ENST00000420503 HNRNPA1P09651 372 aaKnown RBP eCLIP14.21□□□□□ -0.13
LINC00339-203ENST00000420503 XBP1P17861 261 aa14.21□□□□□ -0.13
LINC00339-203ENST00000420503 CSTF1Q05048 431 aaKnown RBP14.21□□□□□ -0.13
LINC00339-203ENST00000420503 RAB33AQ14088 237 aa14.21□□□□□ -0.13
LINC00339-203ENST00000420503 FAM187BQ17R55 369 aa14.21□□□□□ -0.13
LINC00339-203ENST00000420503 TMEM132AQ24JP5 1023 aa14.21□□□□□ -0.13
LINC00339-203ENST00000420503 PABPC1LQ4VXU2 614 aaKnown RBP14.21□□□□□ -0.13
LINC00339-203ENST00000420503 PADI6Q6TGC4 694 aa14.21□□□□□ -0.13
LINC00339-203ENST00000420503 TPRG1Q6ZUI0 275 aa14.21□□□□□ -0.13
LINC00339-203ENST00000420503 RUBCNQ92622 972 aa14.21□□□□□ -0.13
LINC00339-203ENST00000420503 GTF3C6Q969F1 213 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms