RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 LRRC8AQ8IWT6 810 aa15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 TC2NQ8N9U0 490 aa15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 SYN2Q92777 582 aaPredicted RBP15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 FAM81BQ96LP2 452 aa15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 FNBP1Q96RU3 617 aa15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 GDF15Q99988 308 aa15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 TMEM117Q9H0C3 514 aa15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 TRPV6Q9H1D0 765 aa15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 ERVK-5Q9HDB9 667 aa15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 PCDH10Q9P2E7 1040 aa15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 ST3GAL5Q9UNP4 418 aa15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 C2CD2Q9Y426 696 aa15.45■□□□□ 0.06
SHMT1P1-201ENST00000419974 AKR1B15C9JRZ8 316 aaPredicted RBP15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 PES1O00541 588 aaKnown RBP15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 TLR3O15455 904 aaKnown RBP15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 MFAP3LO75121 409 aa15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 CSDE1O75534 798 aaKnown RBP15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 NOL4O94818 638 aa15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 STAG3L1P0CL83 205 aa15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 MXI1P50539 228 aa15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 ZBED6P86452 979 aa15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 LRRC26Q2I0M4 334 aa15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 ZBTB41Q5SVQ8 909 aa15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 UBXN11Q5T124 520 aa15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 ZNF618Q5T7W0 954 aa15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 ALKAL1Q6UXT8 129 aa15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 SV2AQ7L0J3 742 aa15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 FMNL3Q8IVF7 1028 aa15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 C7orf61Q8IZ16 206 aa15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 SPC24Q8NBT2 197 aa15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 EHBP1Q8NDI1 1231 aa15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 CCDC112Q8NEF3 446 aa15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 CPB2Q96IY4 423 aa15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 ACAP3Q96P50 834 aa15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 PPP1R16BQ96T49 567 aa15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 DNAJC7Q99615 494 aa15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 CCDC94Q9BW85 323 aaPredicted RBP15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 RPF1Q9H9Y2 349 aaKnown RBP15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 CEP72Q9P209 647 aa15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 GINS2Q9Y248 185 aa15.44■□□□□ 0.06
SHMT1P1-201ENST00000419974 TRIM49P0CI25 452 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 TRIM49CP0CI26 452 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 SELPP16109 830 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 TRIM21P19474 475 aaKnown RBP15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 TNFSF9P41273 254 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 CDK17Q00537 523 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 MYL7Q01449 175 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 DSC3Q14574 896 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 LPIN1Q14693 890 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 DUOXA2Q1HG44 320 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 TMEM132AQ24JP5 1023 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 KLHDC7AQ5VTJ3 777 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 TRIM65Q6PJ69 517 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 MRPL10Q7Z7H8 261 aaKnown RBP15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 ZBTB33Q86T24 672 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 FBXL13Q8NEE6 735 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 ZNF397Q8NF99 534 aaPredicted RBP15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 NEK11Q8NG66 645 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 ZNF516Q92618 1163 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 JAKMIP2Q96AA8 810 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 NAA15Q9BXJ9 866 aaKnown RBP15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 GANQ9H2C0 597 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 PDE11AQ9HCR9 933 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 PIN4Q9Y237 131 aaKnown RBP15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 LUC7L2Q9Y383 392 aaKnown RBP15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 TRIP12Q14669 1992 aaPredicted RBP15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 SKIP12755 728 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 UCHL3P15374 230 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 CASP14P31944 242 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 KCNJ6P48051 423 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 RAB27AP51159 221 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 MEA1Q16626 185 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 SLC10A6Q3KNW5 377 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 THNSL1Q8IYQ7 743 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 OR8K1Q8NGG5 319 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 BAP1Q92560 729 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 CCDC127Q96BQ5 260 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 TRIM44Q96DX7 344 aaPredicted RBP15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 FTHL17Q9BXU8 183 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 FAM124BQ9H5Z6 455 aaPredicted RBP15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 MMRN2Q9H8L6 949 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 AGO3Q9H9G7 860 aaKnown RBP15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 SIX2Q9NPC8 291 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 TOPORSQ9NS56 1045 aaPredicted RBP15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 RAB20Q9NX57 234 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 GCNT4Q9P109 453 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 CNTN3Q9P232 1028 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 APEX2Q9UBZ4 518 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 PADI3Q9ULW8 664 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 PLAGL2Q9UPG8 496 aa15.43■□□□□ 0.06
SHMT1P1-201ENST00000419974 A0A0U1RQF3 1178 aa15.42■□□□□ 0.06
SHMT1P1-201ENST00000419974 DCDC2CA8MYV0 355 aa15.42■□□□□ 0.06
SHMT1P1-201ENST00000419974 MEFVO15553 781 aaPredicted RBP15.42■□□□□ 0.06
SHMT1P1-201ENST00000419974 STAU1O95793 577 aaKnown RBP15.42■□□□□ 0.06
SHMT1P1-201ENST00000419974 PTMAP06454 111 aaKnown RBP15.42■□□□□ 0.06
SHMT1P1-201ENST00000419974 DLATP10515 647 aaKnown RBP15.42■□□□□ 0.06
SHMT1P1-201ENST00000419974 KCNE1P15382 129 aa15.42■□□□□ 0.06
SHMT1P1-201ENST00000419974 TNNI1P19237 187 aa15.42■□□□□ 0.06
SHMT1P1-201ENST00000419974 FGFR4P22455 802 aa15.42■□□□□ 0.06
SHMT1P1-201ENST00000419974 GCLMP48507 274 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms