RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 CCDC127Q96BQ5 260 aa13.94□□□□□ -0.18
ATG4B-208ENST00000419606 SNX27Q96L92 541 aa13.94□□□□□ -0.18
ATG4B-208ENST00000419606 ZMAT2Q96NC0 199 aaKnown RBP13.94□□□□□ -0.18
ATG4B-208ENST00000419606 RPF1Q9H9Y2 349 aaKnown RBP13.94□□□□□ -0.18
ATG4B-208ENST00000419606 KIAA1586Q9HCI6 787 aa13.94□□□□□ -0.18
ATG4B-208ENST00000419606 TOPORSQ9NS56 1045 aaPredicted RBP13.94□□□□□ -0.18
ATG4B-208ENST00000419606 TTC26A0AVF1 554 aa13.93□□□□□ -0.18
ATG4B-208ENST00000419606 LRRIQ3A6PVS8 624 aaPredicted RBP13.93□□□□□ -0.18
ATG4B-208ENST00000419606 ZBBXA8MT70 800 aa13.93□□□□□ -0.18
ATG4B-208ENST00000419606 SLC34A2O95436 690 aa13.93□□□□□ -0.18
ATG4B-208ENST00000419606 FGFR1OPO95684 399 aaKnown RBP13.93□□□□□ -0.18
ATG4B-208ENST00000419606 EPB41P11171 864 aaKnown RBP13.93□□□□□ -0.18
ATG4B-208ENST00000419606 MLH1P40692 756 aa13.93□□□□□ -0.18
ATG4B-208ENST00000419606 TCP11X2Q5H9J9 407 aa13.93□□□□□ -0.18
ATG4B-208ENST00000419606 GLRA4Q5JXX5 417 aa13.93□□□□□ -0.18
ATG4B-208ENST00000419606 CLLU1OSQ5K130 101 aa13.93□□□□□ -0.18
ATG4B-208ENST00000419606 C9orf50Q5SZB4 431 aa13.93□□□□□ -0.18
ATG4B-208ENST00000419606 FAM117BQ6P1L5 589 aa13.93□□□□□ -0.18
ATG4B-208ENST00000419606 ALKAL1Q6UXT8 129 aa13.93□□□□□ -0.18
ATG4B-208ENST00000419606 EFCAB13Q8IY85 973 aa13.93□□□□□ -0.18
ATG4B-208ENST00000419606 HELQQ8TDG4 1101 aa13.93□□□□□ -0.18
ATG4B-208ENST00000419606 PARD3BQ8TEW8 1205 aa13.93□□□□□ -0.18
ATG4B-208ENST00000419606 ZNF516Q92618 1163 aa13.93□□□□□ -0.18
ATG4B-208ENST00000419606 GAD1Q99259 594 aa13.93□□□□□ -0.18
ATG4B-208ENST00000419606 MKNK1Q9BUB5 465 aa13.93□□□□□ -0.18
ATG4B-208ENST00000419606 TMEM161AQ9NX61 479 aa13.93□□□□□ -0.18
ATG4B-208ENST00000419606 PLAGL2Q9UPG8 496 aa13.93□□□□□ -0.18
ATG4B-208ENST00000419606 COL4A6Q14031 1691 aa13.93□□□□□ -0.18
ATG4B-208ENST00000419606 GOLGA6L19H0YKK7 550 aa13.92□□□□□ -0.18
ATG4B-208ENST00000419606 PTGESO14684 152 aa13.92□□□□□ -0.18
ATG4B-208ENST00000419606 MAPK13O15264 365 aa13.92□□□□□ -0.18
ATG4B-208ENST00000419606 AP5Z1O43299 807 aa13.92□□□□□ -0.18
ATG4B-208ENST00000419606 OFD1O75665 1012 aa13.92□□□□□ -0.18
ATG4B-208ENST00000419606 NFICP08651 508 aa13.92□□□□□ -0.18
ATG4B-208ENST00000419606 DLATP10515 647 aaKnown RBP13.92□□□□□ -0.18
ATG4B-208ENST00000419606 SKIP12755 728 aa13.92□□□□□ -0.18
ATG4B-208ENST00000419606 ACTN1P12814 892 aa13.92□□□□□ -0.18
ATG4B-208ENST00000419606 VAMP7P51809 220 aa13.92□□□□□ -0.18
ATG4B-208ENST00000419606 GUCY2FP51841 1108 aa13.92□□□□□ -0.18
ATG4B-208ENST00000419606 MARSP56192 900 aaKnown RBP13.92□□□□□ -0.18
ATG4B-208ENST00000419606 BFSP1Q12934 665 aa13.92□□□□□ -0.18
ATG4B-208ENST00000419606 PSMD6Q15008 389 aa13.92□□□□□ -0.18
ATG4B-208ENST00000419606 KRT31Q15323 416 aa13.92□□□□□ -0.18
ATG4B-208ENST00000419606 XKR4Q5GH76 650 aa13.92□□□□□ -0.18
ATG4B-208ENST00000419606 DCAF17Q5H9S7 520 aaPredicted RBP13.92□□□□□ -0.18
ATG4B-208ENST00000419606 JADE1Q6IE81 842 aa13.92□□□□□ -0.18
ATG4B-208ENST00000419606 PSRC1Q6PGN9 363 aaPredicted RBP13.92□□□□□ -0.18
ATG4B-208ENST00000419606 APTXQ7Z2E3 356 aaKnown RBP13.92□□□□□ -0.18
ATG4B-208ENST00000419606 FRMD5Q7Z6J6 570 aa13.92□□□□□ -0.18
ATG4B-208ENST00000419606 TRIM59Q8IWR1 403 aa13.92□□□□□ -0.18
ATG4B-208ENST00000419606 GSTCDQ8NEC7 633 aa13.92□□□□□ -0.18
ATG4B-208ENST00000419606 OR5B17Q8NGF7 314 aa13.92□□□□□ -0.18
ATG4B-208ENST00000419606 HERVK_113Q902F9 699 aa13.92□□□□□ -0.18
ATG4B-208ENST00000419606 PGBD4Q96DM1 585 aa13.92□□□□□ -0.18
ATG4B-208ENST00000419606 MMRN2Q9H8L6 949 aa13.92□□□□□ -0.18
ATG4B-208ENST00000419606 RSAD1Q9HA92 442 aa13.92□□□□□ -0.18
ATG4B-208ENST00000419606 TAB2Q9NYJ8 693 aa13.92□□□□□ -0.18
ATG4B-208ENST00000419606 ARMCX3Q9UH62 379 aaPredicted RBP13.92□□□□□ -0.18
ATG4B-208ENST00000419606 INPP5FQ9Y2H2 1132 aa13.92□□□□□ -0.18
ATG4B-208ENST00000419606 PCDHB7Q9Y5E2 793 aa13.92□□□□□ -0.18
ATG4B-208ENST00000419606 FNDC1Q4ZHG4 1894 aaPredicted RBP13.91□□□□□ -0.18
ATG4B-208ENST00000419606 ARL5CA6NH57 179 aa13.91□□□□□ -0.18
ATG4B-208ENST00000419606 BAIAP3O94812 1187 aa13.91□□□□□ -0.18
ATG4B-208ENST00000419606 GNA14O95837 355 aa13.91□□□□□ -0.18
ATG4B-208ENST00000419606 EOMESO95936 686 aa13.91□□□□□ -0.18
ATG4B-208ENST00000419606 POMCP01189 267 aa13.91□□□□□ -0.18
ATG4B-208ENST00000419606 KRT13P13646 458 aa13.91□□□□□ -0.18
ATG4B-208ENST00000419606 MTIF2P46199 727 aaKnown RBP13.91□□□□□ -0.18
ATG4B-208ENST00000419606 SCNN1GP51170 649 aa13.91□□□□□ -0.18
ATG4B-208ENST00000419606 YARSP54577 528 aaKnown RBP13.91□□□□□ -0.18
ATG4B-208ENST00000419606 PPP2R3AQ06190 1150 aa13.91□□□□□ -0.18
ATG4B-208ENST00000419606 PPP3CAQ08209 521 aa13.91□□□□□ -0.18
ATG4B-208ENST00000419606 SHHQ15465 462 aa13.91□□□□□ -0.18
ATG4B-208ENST00000419606 KYAT1Q16773 422 aa13.91□□□□□ -0.18
ATG4B-208ENST00000419606 TCERG1LQ5VWI1 586 aa13.91□□□□□ -0.18
ATG4B-208ENST00000419606 INTS8Q75QN2 995 aaKnown RBP13.91□□□□□ -0.18
ATG4B-208ENST00000419606 NPAS4Q8IUM7 802 aa13.91□□□□□ -0.18
ATG4B-208ENST00000419606 TOP1MTQ969P6 601 aa13.91□□□□□ -0.18
ATG4B-208ENST00000419606 SLC35C1Q96A29 364 aa13.91□□□□□ -0.18
ATG4B-208ENST00000419606 C18orf25Q96B23 403 aaPredicted RBP13.91□□□□□ -0.18
ATG4B-208ENST00000419606 KIF12Q96FN5 646 aa13.91□□□□□ -0.18
ATG4B-208ENST00000419606 CGRRF1Q99675 332 aa13.91□□□□□ -0.18
ATG4B-208ENST00000419606 VPS16Q9H269 839 aa13.91□□□□□ -0.18
ATG4B-208ENST00000419606 ELAC1Q9H777 363 aaKnown RBP13.91□□□□□ -0.18
ATG4B-208ENST00000419606 CNTN3Q9P232 1028 aa13.91□□□□□ -0.18
ATG4B-208ENST00000419606 MAGEC2Q9UBF1 373 aaPredicted RBP13.91□□□□□ -0.18
ATG4B-208ENST00000419606 HCSTQ9UBK5 93 aa13.91□□□□□ -0.18
ATG4B-208ENST00000419606 CACNG4Q9UBN1 327 aa13.91□□□□□ -0.18
ATG4B-208ENST00000419606 LRFN2Q9ULH4 789 aa13.91□□□□□ -0.18
ATG4B-208ENST00000419606 GIT1Q9Y2X7 761 aa13.91□□□□□ -0.18
ATG4B-208ENST00000419606 TDRD15B5MCY1 1934 aaKnown RBP13.9□□□□□ -0.18
ATG4B-208ENST00000419606 SMIM28A0A1B0GU29 152 aa13.9□□□□□ -0.18
ATG4B-208ENST00000419606 B4GALT3O60512 393 aa13.9□□□□□ -0.18
ATG4B-208ENST00000419606 IL18RAPO95256 599 aa13.9□□□□□ -0.18
ATG4B-208ENST00000419606 AMHP03971 560 aa13.9□□□□□ -0.18
ATG4B-208ENST00000419606 CDK11BP21127 795 aaKnown RBP13.9□□□□□ -0.18
ATG4B-208ENST00000419606 EEF1GP26641 437 aaKnown RBP13.9□□□□□ -0.18
ATG4B-208ENST00000419606 KCNJ6P48051 423 aa13.9□□□□□ -0.18
ATG4B-208ENST00000419606 GCLMP48507 274 aa13.9□□□□□ -0.18
ATG4B-208ENST00000419606 COPB1P53618 953 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms