RNA–Protein interactions for RNA: ENST00000419472.1

VPS13A-207, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 1 (best)

Gene VPS13A, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-207ENST00000419472 SLC27A2O14975 620 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 SOAT2O75908 522 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 ROR1Q01973 937 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 ARHGAP15Q53QZ3 475 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 SFRP5Q5T4F7 317 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 RRAGBQ5VZM2 374 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 KCTD1Q719H9 257 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 PAWRQ96IZ0 340 aaKnown RBP5.81□□□□□ -1.48
VPS13A-207ENST00000419472 PRDM5Q9NQX1 630 aaPredicted RBP5.81□□□□□ -1.48
VPS13A-207ENST00000419472 ABCF2Q9UG63 623 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 USP18Q9UMW8 372 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 CPS1P31327 1500 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 TRBV23OR9-2A0A075B6M9 112 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 A0A0B4J269 797 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 UBA6A0AVT1 1052 aaPredicted RBP5.81□□□□□ -1.48
VPS13A-207ENST00000419472 H7BY64 318 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 RNF225M0QZC1 329 aaPredicted RBP5.81□□□□□ -1.48
VPS13A-207ENST00000419472 SYT5O00445 386 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 DHX16O60231 1041 aaKnown RBP5.81□□□□□ -1.48
VPS13A-207ENST00000419472 ALX3O95076 343 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 DDX58O95786 925 aaKnown RBP5.81□□□□□ -1.48
VPS13A-207ENST00000419472 C4BPAP04003 597 aaKnown RBP5.81□□□□□ -1.48
VPS13A-207ENST00000419472 PFKMP08237 780 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 AKR1B1P15121 316 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 OAS2P29728 719 aaKnown RBP5.81□□□□□ -1.48
VPS13A-207ENST00000419472 HK3P52790 923 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 PPARAQ07869 468 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 SPIDRQ14159 915 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 NR0B2Q15466 257 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 CILP2Q8IUL8 1156 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 RHOT1Q8IXI2 618 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 NAT16Q8N8M0 369 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 ATP11CQ8NB49 1132 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 TMEM52Q8NDY8 209 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 DMRTA2Q96SC8 542 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 PYM1Q9BRP8 204 aaKnown RBP5.81□□□□□ -1.48
VPS13A-207ENST00000419472 DUSP15Q9H1R2 295 aaPredicted RBP5.81□□□□□ -1.48
VPS13A-207ENST00000419472 SACM1LQ9NTJ5 587 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 SRP68Q9UHB9 627 aaKnown RBP5.81□□□□□ -1.48
VPS13A-207ENST00000419472 RWDD3Q9Y3V2 267 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 E9PCH4 1651 aa5.81□□□□□ -1.48
VPS13A-207ENST00000419472 LTBP4Q8N2S1 1624 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 DOK2O60496 412 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 TPM2P07951 284 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 NPTX2P47972 431 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 USP11P51784 963 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 SEC24CP53992 1094 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 RPS16P62249 146 aaKnown RBP5.8□□□□□ -1.48
VPS13A-207ENST00000419472 FBXO47Q5MNV8 452 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 TTLL5Q6EMB2 1281 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.8□□□□□ -1.48
VPS13A-207ENST00000419472 ADGRG2Q8IZP9 1017 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 GPR161Q8N6U8 529 aaKnown RBP5.8□□□□□ -1.48
VPS13A-207ENST00000419472 UHMK1Q8TAS1 419 aaKnown RBP5.8□□□□□ -1.48
VPS13A-207ENST00000419472 ASB15Q8WXK1 588 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 HERVK_113Q902F9 699 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 SECISBP2LQ93073 1101 aaKnown RBP5.8□□□□□ -1.48
VPS13A-207ENST00000419472 ADAM7Q9H2U9 754 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 LMBRD1Q9NUN5 540 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 ARHGAP28Q9P2N2 729 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 SCOCQ9UIL1 159 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 NUMBLQ9Y6R0 609 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 SPHKAPQ2M3C7 1700 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 TMEM82A0PJX8 343 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 FOXP2O15409 715 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 DGKIO75912 1065 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 DNTTP04053 509 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 FUCA1P04066 466 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 SRFP11831 508 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 XBP1P17861 261 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 POLD1P28340 1107 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 UBA7P41226 1012 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 MCAMP43121 646 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 FNTBP49356 437 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 PFKPQ01813 784 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 FOXO1Q12778 655 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 NFKBIBQ15653 356 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 SGO2Q562F6 1265 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 KLHDC10Q6PID8 442 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 NEK10Q6ZWH5 1172 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 MIGA2Q7L4E1 593 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 HEATR3Q7Z4Q2 680 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 ZSCAN30Q86W11 494 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 MSL3Q8N5Y2 521 aaKnown RBP5.8□□□□□ -1.48
VPS13A-207ENST00000419472 GLB1L3Q8NCI6 653 aaPredicted RBP5.8□□□□□ -1.48
VPS13A-207ENST00000419472 OR1N1Q8NGS0 311 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 WHAMMQ8TF30 809 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 GBP4Q96PP9 640 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 COLEC11Q9BWP8 271 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 EPB41L1Q9H4G0 881 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 SLC6A20Q9NP91 592 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 C1GALT1Q9NS00 363 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 TMEM51Q9NW97 253 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 MYO1AQ9UBC5 1043 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 FEM1BQ9UK73 627 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 CDY2AQ9Y6F7 541 aa5.8□□□□□ -1.48
VPS13A-207ENST00000419472 PGPEP1LA6NFU8 196 aa5.79□□□□□ -1.48
VPS13A-207ENST00000419472 P4HA2O15460 535 aa5.79□□□□□ -1.48
VPS13A-207ENST00000419472 MAP2K3P46734 347 aa5.79□□□□□ -1.48
VPS13A-207ENST00000419472 FOXO4P98177 505 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms