RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 PRAMEF25A6NGN4 478 aa6.96□□□□□ -1.3
NIFKP3-201ENST00000417799 ECE2O60344 883 aa6.96□□□□□ -1.3
NIFKP3-201ENST00000417799 C4BPAP04003 597 aaKnown RBP6.96□□□□□ -1.3
NIFKP3-201ENST00000417799 CYP17A1P05093 508 aa6.96□□□□□ -1.3
NIFKP3-201ENST00000417799 IARSP41252 1262 aaKnown RBP6.96□□□□□ -1.3
NIFKP3-201ENST00000417799 CHAF1AQ13111 956 aaPredicted RBP6.96□□□□□ -1.3
NIFKP3-201ENST00000417799 PAN2Q504Q3 1202 aaKnown RBP6.96□□□□□ -1.3
NIFKP3-201ENST00000417799 OLFML2BQ68BL8 750 aa6.96□□□□□ -1.3
NIFKP3-201ENST00000417799 MPZL3Q6UWV2 235 aa6.96□□□□□ -1.3
NIFKP3-201ENST00000417799 TMC6Q7Z403 805 aa6.96□□□□□ -1.3
NIFKP3-201ENST00000417799 KBTBD3Q8NAB2 608 aa6.96□□□□□ -1.3
NIFKP3-201ENST00000417799 FAM168AQ92567 244 aa6.96□□□□□ -1.3
NIFKP3-201ENST00000417799 ALG3Q92685 438 aa6.96□□□□□ -1.3
NIFKP3-201ENST00000417799 YIPF4Q9BSR8 244 aa6.96□□□□□ -1.3
NIFKP3-201ENST00000417799 FSD1Q9BTV5 496 aa6.96□□□□□ -1.3
NIFKP3-201ENST00000417799 IRF2BPLQ9H1B7 796 aa6.96□□□□□ -1.3
NIFKP3-201ENST00000417799 ZNF552Q9H707 407 aaPredicted RBP6.96□□□□□ -1.3
NIFKP3-201ENST00000417799 DBNDD1Q9H9R9 158 aa6.96□□□□□ -1.3
NIFKP3-201ENST00000417799 GOLGA2P5Q9HBQ8 144 aa6.96□□□□□ -1.3
NIFKP3-201ENST00000417799 PIH1D3Q9NQM4 214 aaKnown RBP6.96□□□□□ -1.3
NIFKP3-201ENST00000417799 BRCA1P38398 1863 aaKnown RBP6.96□□□□□ -1.3
NIFKP3-201ENST00000417799 ACOT7O00154 380 aa6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 HRKO00198 91 aa6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 HIP1O00291 1037 aa6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 RNF113AO15541 343 aaKnown RBP6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 IDH1O75874 414 aaKnown RBP6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 FAHP16930 419 aa6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 ITGB5P18084 799 aa6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 CHMLP26374 656 aa6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 SDHAP31040 664 aa6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 SESN3P58005 492 aa6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 ITKQ08881 620 aa6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 FAPQ12884 760 aa6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 MTMR1Q13613 665 aa6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 BROXQ5VW32 411 aa6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 SPTY2D1Q68D10 685 aaPredicted RBP6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 TTLL5Q6EMB2 1281 aa6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 ZSCAN25Q6NSZ9 544 aa6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 CASC1Q6TDU7 716 aa6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 ZNF605Q86T29 641 aa6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 MIB1Q86YT6 1006 aa6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 FAM126BQ8IXS8 530 aa6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 ZGPATQ8N5A5 531 aaKnown RBP6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 CNTD1Q8N815 330 aa6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 TBC1D22AQ8WUA7 517 aa6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 METTL14Q9HCE5 456 aaKnown RBP6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 DTLQ9NZJ0 730 aa6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 ABCF2Q9UG63 623 aa6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 JAG2Q9Y219 1238 aa6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 COL1A1P02452 1464 aaPredicted RBP6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 FAM205AQ6ZU69 1335 aa6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 SALL1Q9NSC2 1324 aa6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 RFX7Q2KHR2 1363 aa6.95□□□□□ -1.3
NIFKP3-201ENST00000417799 AKAP11Q9UKA4 1901 aa6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 ZNF503-AS2A6NEH8 195 aa6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 YDJCA8MPS7 323 aa6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 FOXP2O15409 715 aa6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 PRKD3O94806 890 aa6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 S100BP04271 92 aaPredicted RBP6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 ZFYP08048 801 aaPredicted RBP6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 JUNBP17275 347 aaPredicted RBP6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 PTX3P26022 381 aaPredicted RBP6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 VIPR1P32241 457 aa6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 LSP1P33241 339 aa6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 PRELPP51888 382 aa6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 PHC1P78364 1004 aa6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 SMAD3P84022 425 aaKnown RBP6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 ZNF200P98182 395 aaPredicted RBP6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 MAP3K12Q12852 859 aa6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 TERF2Q15554 542 aa6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 SMAD2Q15796 467 aaKnown RBP6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 GPR162Q16538 588 aa6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 MFSD14BQ5SR56 506 aa6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 SLC9C2Q5TAH2 1124 aa6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 STRIP1Q5VSL9 837 aa6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 ETV3LQ6ZN32 361 aa6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 CLRN3Q8NCR9 226 aa6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 RUFY2Q8WXA3 655 aa6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 JDP2Q8WYK2 163 aa6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 MTMR8Q96EF0 704 aa6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 TOE1Q96GM8 510 aaKnown RBP6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 LIN37Q96GY3 246 aaPredicted RBP6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 TRIM8Q9BZR9 551 aa6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 DIAPH3Q9NSV4 1193 aa6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 RAI14Q9P0K7 980 aa6.94□□□□□ -1.3
NIFKP3-201ENST00000417799 ARFGEF1Q9Y6D6 1849 aa6.93□□□□□ -1.3
NIFKP3-201ENST00000417799 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.93□□□□□ -1.3
NIFKP3-201ENST00000417799 EIF5BO60841 1220 aaKnown RBP6.93□□□□□ -1.3
NIFKP3-201ENST00000417799 LRG1P02750 347 aa6.93□□□□□ -1.3
NIFKP3-201ENST00000417799 ADD2P35612 726 aa6.93□□□□□ -1.3
NIFKP3-201ENST00000417799 FNTBP49356 437 aa6.93□□□□□ -1.3
NIFKP3-201ENST00000417799 IRAK1P51617 712 aa6.93□□□□□ -1.3
NIFKP3-201ENST00000417799 HERVK_113P62684 666 aa6.93□□□□□ -1.3
NIFKP3-201ENST00000417799 FKBP1AP62942 108 aaKnown RBP6.93□□□□□ -1.3
NIFKP3-201ENST00000417799 SRSF3P84103 164 aaKnown RBP6.93□□□□□ -1.3
NIFKP3-201ENST00000417799 MECOMQ03112 1051 aa6.93□□□□□ -1.3
NIFKP3-201ENST00000417799 UBE3CQ15386 1083 aa6.93□□□□□ -1.3
NIFKP3-201ENST00000417799 DACT2Q5SW24 774 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms