RNA–Protein interactions for RNA: ENST00000417652.5

NCL-203, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-203ENST00000417652 HPSEQ9Y251 543 aa7.51□□□□□ -1.21
NCL-203ENST00000417652 R3HCC1Q9Y3T6 440 aaKnown RBP7.51□□□□□ -1.21
NCL-203ENST00000417652 TDRD15B5MCY1 1934 aaKnown RBP7.5□□□□□ -1.21
NCL-203ENST00000417652 CHD7Q9P2D1 2997 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 TRANK1O15050 2925 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 SZT2Q5T011 3432 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 RALGAPA2Q2PPJ7 1873 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 SMIM28A0A1B0GU29 152 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 CASTOR2A6NHX0 329 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 ANKRD63C9JTQ0 380 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 GOLGA6L22H0YM25 854 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 C2CD2LO14523 706 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 NCK2O43639 380 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 PRPF40AO75400 957 aaKnown RBP7.5□□□□□ -1.21
NCL-203ENST00000417652 LDHAP00338 332 aaKnown RBP7.5□□□□□ -1.21
NCL-203ENST00000417652 RPN1P04843 607 aaKnown RBP7.5□□□□□ -1.21
NCL-203ENST00000417652 POU3F3P20264 500 aaPredicted RBP7.5□□□□□ -1.21
NCL-203ENST00000417652 ACOT2P49753 483 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 PLCB3Q01970 1234 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 FAM160A1Q05DH4 1040 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 HSP90AA2PQ14568 343 aaPredicted RBP7.5□□□□□ -1.21
NCL-203ENST00000417652 SMC1AQ14683 1233 aaKnown RBP7.5□□□□□ -1.21
NCL-203ENST00000417652 KMT5BQ4FZB7 885 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 TCEAL5Q5H9L2 206 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 PLPP4Q5VZY2 271 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 ARMCX5Q6P1M9 558 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 DDX53Q86TM3 631 aaKnown RBP7.5□□□□□ -1.21
NCL-203ENST00000417652 CEP57Q86XR8 500 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 COLGALT2Q8IYK4 626 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 SLC39A11Q8N1S5 342 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 CEP120Q8N960 986 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 RABGGTAQ92696 567 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 HLA-CQ95604 372 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 KIF12Q96FN5 646 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 DDX27Q96GQ7 796 aaKnown RBP7.5□□□□□ -1.21
NCL-203ENST00000417652 IGSF21Q96ID5 467 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 GBP4Q96PP9 640 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 FAM213AQ9BRX8 229 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 GOLPH3LQ9H4A5 285 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 PCIF1Q9H4Z3 704 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 PLEKHA5Q9HAU0 1116 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 PTPRHQ9HD43 1115 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 NGRNQ9NPE2 291 aaKnown RBP7.5□□□□□ -1.21
NCL-203ENST00000417652 RMND1Q9NWS8 449 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 LZTS1Q9Y250 596 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 NUB1Q9Y5A7 615 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 TRIP11Q15643 1979 aa7.5□□□□□ -1.21
NCL-203ENST00000417652 CITO14578 2027 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 ZMYM2Q9UBW7 1377 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 A0A0B4J269 797 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 FAM237AA0A1B0GTK4 181 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.49□□□□□ -1.21
NCL-203ENST00000417652 FRMD3A2A2Y4 597 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 GOLGA8IPA6NC78 632 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 GOLGA8JA6NMD2 632 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 LACTBL1A8MY62 500 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 PER2O15055 1255 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 EIF3DO15371 548 aaKnown RBP eCLIP7.49□□□□□ -1.214e-20■□□□□ 8.2
NCL-203ENST00000417652 TRAPPC3O43617 180 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 B3GAT3O94766 335 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 SLC34A2O95436 690 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 PIGRP01833 764 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 URODP06132 367 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 SRGAP2BP0DMP2 458 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 CXCL8P10145 99 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 GARTP22102 1010 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 PROZP22891 400 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 DNAJB1P25685 340 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 NRIP1P48552 1158 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 CASP5P51878 434 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 ERVFC1P60507 584 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 SPAG1Q07617 926 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 KCNA1Q09470 495 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 AAK1Q2M2I8 961 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 DCLRE1AQ6PJP8 1040 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 CD302Q8IX05 232 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 BEST2Q8NFU1 509 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 GOLGA5Q8TBA6 731 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 HASPINQ8TF76 798 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 CACTINQ8WUQ7 758 aaKnown RBP7.49□□□□□ -1.21
NCL-203ENST00000417652 SMARCE1Q969G3 411 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 SAAL1Q96ER3 474 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 SNX27Q96L92 541 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 UROC1Q96N76 676 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 FIZ1Q96SL8 496 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 EMILIN2Q9BXX0 1053 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 TSHZ2Q9NRE2 1034 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 MRPL17Q9NRX2 175 aaKnown RBP7.49□□□□□ -1.21
NCL-203ENST00000417652 CLDND1Q9NY35 253 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 COG5Q9UP83 839 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 SSX2IPQ9Y2D8 614 aa7.49□□□□□ -1.21
NCL-203ENST00000417652 SF3B1O75533 1304 aaKnown RBP eCLIP7.49□□□□□ -1.21
NCL-203ENST00000417652 FSD2A1L4K1 749 aa7.48□□□□□ -1.21
NCL-203ENST00000417652 ZNF233A6NK53 670 aa7.48□□□□□ -1.21
NCL-203ENST00000417652 TISP43B9A030 160 aa7.48□□□□□ -1.21
NCL-203ENST00000417652 PODXLO00592 558 aa7.48□□□□□ -1.21
NCL-203ENST00000417652 PTGESO14684 152 aa7.48□□□□□ -1.21
NCL-203ENST00000417652 KIAA0391O15091 583 aaKnown RBP7.48□□□□□ -1.21
NCL-203ENST00000417652 CLIC2O15247 247 aa7.48□□□□□ -1.21
NCL-203ENST00000417652 INPPL1O15357 1258 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms