RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 MAFO75444 373 aaPredicted RBP17.61■□□□□ 0.41
CPNE1-208ENST00000414711 CCDC192P0DO97 292 aa17.61■□□□□ 0.41
CPNE1-208ENST00000414711 FAM171A1Q5VUB5 890 aa17.61■□□□□ 0.41
CPNE1-208ENST00000414711 C1orf228Q6PIY5 440 aa17.61■□□□□ 0.41
CPNE1-208ENST00000414711 SRGAP1Q7Z6B7 1085 aa17.61■□□□□ 0.41
CPNE1-208ENST00000414711 TMTC2Q8N394 836 aa17.61■□□□□ 0.41
CPNE1-208ENST00000414711 HASPINQ8TF76 798 aa17.61■□□□□ 0.41
CPNE1-208ENST00000414711 MTA3Q9BTC8 594 aa17.61■□□□□ 0.41
CPNE1-208ENST00000414711 ANKFY1Q9P2R3 1169 aa17.61■□□□□ 0.41
CPNE1-208ENST00000414711 CACNG4Q9UBN1 327 aa17.61■□□□□ 0.41
CPNE1-208ENST00000414711 hCG_1984214I3L0E3 225 aa17.6■□□□□ 0.41
CPNE1-208ENST00000414711 ERLIN2O94905 339 aa17.6■□□□□ 0.41
CPNE1-208ENST00000414711 STBD1O95210 358 aa17.6■□□□□ 0.41
CPNE1-208ENST00000414711 PTH1RQ03431 593 aa17.6■□□□□ 0.41
CPNE1-208ENST00000414711 GRIK3Q13003 919 aa17.6■□□□□ 0.41
CPNE1-208ENST00000414711 RAB33AQ14088 237 aa17.6■□□□□ 0.41
CPNE1-208ENST00000414711 WDR44Q5JSH3 913 aa17.6■□□□□ 0.41
CPNE1-208ENST00000414711 RTL10Q7L3V2 364 aa17.6■□□□□ 0.41
CPNE1-208ENST00000414711 MICU3Q86XE3 530 aa17.6■□□□□ 0.41
CPNE1-208ENST00000414711 ZNF713Q8N859 430 aaPredicted RBP17.6■□□□□ 0.41
CPNE1-208ENST00000414711 FANCBQ8NB91 859 aa17.6■□□□□ 0.41
CPNE1-208ENST00000414711 GSTCDQ8NEC7 633 aa17.6■□□□□ 0.41
CPNE1-208ENST00000414711 DEPDC1BQ8WUY9 529 aa17.6■□□□□ 0.41
CPNE1-208ENST00000414711 LENG9Q96B70 501 aa17.6■□□□□ 0.41
CPNE1-208ENST00000414711 ASB16Q96NS5 453 aa17.6■□□□□ 0.41
CPNE1-208ENST00000414711 JPH2Q9BR39 696 aaPredicted RBP17.6■□□□□ 0.41
CPNE1-208ENST00000414711 OSBPL3Q9H4L5 887 aa17.6■□□□□ 0.41
CPNE1-208ENST00000414711 BARHL2Q9NY43 387 aa17.6■□□□□ 0.41
CPNE1-208ENST00000414711 GIT1Q9Y2X7 761 aa17.6■□□□□ 0.41
CPNE1-208ENST00000414711 GPSM3Q9Y4H4 160 aa17.6■□□□□ 0.41
CPNE1-208ENST00000414711 SLC12A7Q9Y666 1083 aa17.6■□□□□ 0.41
CPNE1-208ENST00000414711 FREM2Q5SZK8 3169 aa17.6■□□□□ 0.41
CPNE1-208ENST00000414711 ARNTLO00327 626 aa17.59■□□□□ 0.41
CPNE1-208ENST00000414711 ZNF263O14978 683 aa17.59■□□□□ 0.41
CPNE1-208ENST00000414711 HYAL3O43820 417 aaPredicted RBP17.59■□□□□ 0.41
CPNE1-208ENST00000414711 GAS7O60861 476 aa17.59■□□□□ 0.41
CPNE1-208ENST00000414711 SRGAP2CP0DJJ0 459 aa17.59■□□□□ 0.41
CPNE1-208ENST00000414711 CSRP1P21291 193 aaKnown RBP17.59■□□□□ 0.41
CPNE1-208ENST00000414711 MLLT6P55198 1093 aaPredicted RBP17.59■□□□□ 0.41
CPNE1-208ENST00000414711 PRSS36Q5K4E3 855 aa17.59■□□□□ 0.41
CPNE1-208ENST00000414711 DGKKQ5KSL6 1271 aa17.59■□□□□ 0.41
CPNE1-208ENST00000414711 PDXDC1Q6P996 788 aa17.59■□□□□ 0.41
CPNE1-208ENST00000414711 C19orf48Q6RUI8 117 aa17.59■□□□□ 0.41
CPNE1-208ENST00000414711 PLEKHM2Q8IWE5 1019 aa17.59■□□□□ 0.41
CPNE1-208ENST00000414711 CCDC51Q96ER9 411 aa17.59■□□□□ 0.41
CPNE1-208ENST00000414711 PAAF1Q9BRP4 392 aa17.59■□□□□ 0.41
CPNE1-208ENST00000414711 UNC45AQ9H3U1 944 aa17.59■□□□□ 0.41
CPNE1-208ENST00000414711 NXF3Q9H4D5 531 aaKnown RBP17.59■□□□□ 0.41
CPNE1-208ENST00000414711 MSRB2Q9Y3D2 182 aa17.59■□□□□ 0.41
CPNE1-208ENST00000414711 LNP1A1A4G5 178 aa17.58■□□□□ 0.4
CPNE1-208ENST00000414711 AKAP3O75969 853 aa17.58■□□□□ 0.4
CPNE1-208ENST00000414711 KIF4AO95239 1232 aa17.58■□□□□ 0.4
CPNE1-208ENST00000414711 OR1D2P34982 312 aa17.58■□□□□ 0.4
CPNE1-208ENST00000414711 PXNP49023 591 aaPredicted RBP17.58■□□□□ 0.4
CPNE1-208ENST00000414711 NOTUMQ6P988 496 aa17.58■□□□□ 0.4
CPNE1-208ENST00000414711 PROSER1Q86XN7 944 aa17.58■□□□□ 0.4
CPNE1-208ENST00000414711 HACE1Q8IYU2 909 aa17.58■□□□□ 0.4
CPNE1-208ENST00000414711 CSGALNACT1Q8TDX6 532 aa17.58■□□□□ 0.4
CPNE1-208ENST00000414711 SMARCD2Q92925 531 aa17.58■□□□□ 0.4
CPNE1-208ENST00000414711 TCEAL4Q96EI5 215 aa17.58■□□□□ 0.4
CPNE1-208ENST00000414711 TMEM87BQ96K49 555 aa17.58■□□□□ 0.4
CPNE1-208ENST00000414711 ZC3H10Q96K80 434 aaKnown RBP17.58■□□□□ 0.4
CPNE1-208ENST00000414711 RIT2Q99578 217 aa17.58■□□□□ 0.4
CPNE1-208ENST00000414711 LAMA5O15230 3695 aa17.58■□□□□ 0.4
CPNE1-208ENST00000414711 WDR27A2RRH5 827 aa17.57■□□□□ 0.4
CPNE1-208ENST00000414711 SLC38A8A6NNN8 435 aa17.57■□□□□ 0.4
CPNE1-208ENST00000414711 TSPAN1O60635 241 aa17.57■□□□□ 0.4
CPNE1-208ENST00000414711 CIITAP33076 1130 aa17.57■□□□□ 0.4
CPNE1-208ENST00000414711 SOX9P48436 509 aa17.57■□□□□ 0.4
CPNE1-208ENST00000414711 KPNA1P52294 538 aaPredicted RBP17.57■□□□□ 0.4
CPNE1-208ENST00000414711 LRCH2Q5VUJ6 765 aa17.57■□□□□ 0.4
CPNE1-208ENST00000414711 PLA2G4FQ68DD2 849 aa17.57■□□□□ 0.4
CPNE1-208ENST00000414711 RDM1Q8NG50 284 aa17.57■□□□□ 0.4
CPNE1-208ENST00000414711 PSPC1Q8WXF1 523 aaKnown RBP17.57■□□□□ 0.4
CPNE1-208ENST00000414711 CORO1BQ9BR76 489 aa17.57■□□□□ 0.4
CPNE1-208ENST00000414711 TEKT3Q9BXF9 490 aa17.57■□□□□ 0.4
CPNE1-208ENST00000414711 TRIM6Q9C030 488 aaPredicted RBP17.57■□□□□ 0.4
CPNE1-208ENST00000414711 KLK13Q9UKR3 277 aa17.57■□□□□ 0.4
CPNE1-208ENST00000414711 PDCD11Q14690 1871 aaKnown RBP17.56■□□□□ 0.4
CPNE1-208ENST00000414711 ZMYM2Q9UBW7 1377 aa17.56■□□□□ 0.4
CPNE1-208ENST00000414711 NCANO14594 1321 aa17.56■□□□□ 0.4
CPNE1-208ENST00000414711 CCDC163A0A0D9SF12 145 aa17.56■□□□□ 0.4
CPNE1-208ENST00000414711 CASTOR2A6NHX0 329 aa17.56■□□□□ 0.4
CPNE1-208ENST00000414711 DDX11L8A8MPP1 907 aa17.56■□□□□ 0.4
CPNE1-208ENST00000414711 MSH4O15457 936 aa17.56■□□□□ 0.4
CPNE1-208ENST00000414711 EXTL3O43909 919 aa17.56■□□□□ 0.4
CPNE1-208ENST00000414711 PTPN2P17706 415 aa17.56■□□□□ 0.4
CPNE1-208ENST00000414711 AKAP5P24588 427 aa17.56■□□□□ 0.4
CPNE1-208ENST00000414711 VIPR2P41587 438 aa17.56■□□□□ 0.4
CPNE1-208ENST00000414711 LIFRP42702 1097 aa17.56■□□□□ 0.4
CPNE1-208ENST00000414711 LAMTOR4Q0VGL1 99 aa17.56■□□□□ 0.4
CPNE1-208ENST00000414711 ELAVL2Q12926 359 aaKnown RBP17.56■□□□□ 0.4
CPNE1-208ENST00000414711 HDAC1Q13547 482 aaPredicted RBP17.56■□□□□ 0.4
CPNE1-208ENST00000414711 PLK5Q496M5 336 aa17.56■□□□□ 0.4
CPNE1-208ENST00000414711 MIER3Q7Z3K6 550 aa17.56■□□□□ 0.4
CPNE1-208ENST00000414711 PRPF31Q8WWY3 499 aaKnown RBP17.56■□□□□ 0.4
CPNE1-208ENST00000414711 SLC7A3Q8WY07 619 aa17.56■□□□□ 0.4
CPNE1-208ENST00000414711 CPB2Q96IY4 423 aa17.56■□□□□ 0.4
CPNE1-208ENST00000414711 CSRNP2Q9H175 543 aa17.56■□□□□ 0.4
CPNE1-208ENST00000414711 C8orf33Q9H7E9 229 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms