RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 PTPRJQ12913 1337 aa16.83■□□□□ 0.28
SHMT2-202ENST00000414700 LRRIQ3A6PVS8 624 aaPredicted RBP16.83■□□□□ 0.28
SHMT2-202ENST00000414700 NPTXRO95502 500 aa16.83■□□□□ 0.28
SHMT2-202ENST00000414700 DLATP10515 647 aaKnown RBP16.83■□□□□ 0.28
SHMT2-202ENST00000414700 SKILP12757 684 aa16.83■□□□□ 0.28
SHMT2-202ENST00000414700 KRT13P13646 458 aa16.83■□□□□ 0.28
SHMT2-202ENST00000414700 TLE2Q04725 743 aa16.83■□□□□ 0.28
SHMT2-202ENST00000414700 FAAP100Q0VG06 881 aa16.83■□□□□ 0.28
SHMT2-202ENST00000414700 PCBP1Q15365 356 aaKnown RBP eCLIP16.83■□□□□ 0.28
SHMT2-202ENST00000414700 FAM26DQ5JW98 314 aa16.83■□□□□ 0.28
SHMT2-202ENST00000414700 ANKRD33Q7Z3H0 272 aa16.83■□□□□ 0.28
SHMT2-202ENST00000414700 ANKLE1Q8NAG6 615 aa16.83■□□□□ 0.28
SHMT2-202ENST00000414700 PADI3Q9ULW8 664 aa16.83■□□□□ 0.28
SHMT2-202ENST00000414700 KIAA0391O15091 583 aaKnown RBP16.82■□□□□ 0.28
SHMT2-202ENST00000414700 LDHAP00338 332 aaKnown RBP16.82■□□□□ 0.28
SHMT2-202ENST00000414700 AFPP02771 609 aaKnown RBP16.82■□□□□ 0.28
SHMT2-202ENST00000414700 CXCL8P10145 99 aa16.82■□□□□ 0.28
SHMT2-202ENST00000414700 MCF2P10911 925 aa16.82■□□□□ 0.28
SHMT2-202ENST00000414700 APBA1Q02410 837 aa16.82■□□□□ 0.28
SHMT2-202ENST00000414700 ENOX2Q16206 610 aaKnown RBP16.82■□□□□ 0.28
SHMT2-202ENST00000414700 SLC27A1Q6PCB7 646 aa16.82■□□□□ 0.28
SHMT2-202ENST00000414700 CCAR2Q8N163 923 aaKnown RBP16.82■□□□□ 0.28
SHMT2-202ENST00000414700 SEZ6LQ9BYH1 1024 aa16.82■□□□□ 0.28
SHMT2-202ENST00000414700 KIAA1586Q9HCI6 787 aa16.82■□□□□ 0.28
SHMT2-202ENST00000414700 LRRN2O75325 713 aa16.82■□□□□ 0.28
SHMT2-202ENST00000414700 STAG3L1P0CL83 205 aa16.82■□□□□ 0.28
SHMT2-202ENST00000414700 EN2P19622 333 aaPredicted RBP16.82■□□□□ 0.28
SHMT2-202ENST00000414700 GCLMP48507 274 aa16.82■□□□□ 0.28
SHMT2-202ENST00000414700 KCNMA1Q12791 1236 aa16.82■□□□□ 0.28
SHMT2-202ENST00000414700 LRRC26Q2I0M4 334 aa16.82■□□□□ 0.28
SHMT2-202ENST00000414700 UBXN11Q5T124 520 aa16.82■□□□□ 0.28
SHMT2-202ENST00000414700 ADPGKQ9BRR6 497 aa16.82■□□□□ 0.28
SHMT2-202ENST00000414700 CXCL16Q9H2A7 254 aa16.82■□□□□ 0.28
SHMT2-202ENST00000414700 NXF3Q9H4D5 531 aaKnown RBP16.82■□□□□ 0.28
SHMT2-202ENST00000414700 C11orf49Q9H6J7 331 aa16.82■□□□□ 0.28
SHMT2-202ENST00000414700 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.82■□□□□ 0.28
SHMT2-202ENST00000414700 ATP11BQ9Y2G3 1177 aa16.82■□□□□ 0.28
SHMT2-202ENST00000414700 MROH7Q68CQ1 1323 aa16.81■□□□□ 0.28
SHMT2-202ENST00000414700 CAND2O75155 1236 aa16.81■□□□□ 0.28
SHMT2-202ENST00000414700 FMO5P49326 533 aa16.81■□□□□ 0.28
SHMT2-202ENST00000414700 HNRNPH2P55795 449 aaKnown RBP16.81■□□□□ 0.28
SHMT2-202ENST00000414700 CCZ1BP86790 482 aa16.81■□□□□ 0.28
SHMT2-202ENST00000414700 CCZ1P86791 482 aaPredicted RBP16.81■□□□□ 0.28
SHMT2-202ENST00000414700 GOLGA8FQ08AF8 430 aa16.81■□□□□ 0.28
SHMT2-202ENST00000414700 GOLGA8DPQ0D2H9 430 aa16.81■□□□□ 0.28
SHMT2-202ENST00000414700 GPNMBQ14956 572 aa16.81■□□□□ 0.28
SHMT2-202ENST00000414700 FKBP15Q5T1M5 1219 aa16.81■□□□□ 0.28
SHMT2-202ENST00000414700 SPECC1LQ69YQ0 1117 aa16.81■□□□□ 0.28
SHMT2-202ENST00000414700 BRSK2Q8IWQ3 736 aa16.81■□□□□ 0.28
SHMT2-202ENST00000414700 CAGE1Q8TC20 777 aa16.81■□□□□ 0.28
SHMT2-202ENST00000414700 ZNF516Q92618 1163 aa16.81■□□□□ 0.28
SHMT2-202ENST00000414700 FAM212AQ96EL1 285 aa16.81■□□□□ 0.28
SHMT2-202ENST00000414700 ERGIC2Q96RQ1 377 aa16.81■□□□□ 0.28
SHMT2-202ENST00000414700 TMX1Q9H3N1 280 aa16.81■□□□□ 0.28
SHMT2-202ENST00000414700 ERVK-5Q9HDB9 667 aa16.81■□□□□ 0.28
SHMT2-202ENST00000414700 SIK3Q9Y2K2 1263 aa16.81■□□□□ 0.28
SHMT2-202ENST00000414700 MGEA5O60502 916 aa16.8■□□□□ 0.28
SHMT2-202ENST00000414700 AXLP30530 894 aa16.8■□□□□ 0.28
SHMT2-202ENST00000414700 MCCD1P59942 119 aaPredicted RBP16.8■□□□□ 0.28
SHMT2-202ENST00000414700 RBL2Q08999 1139 aa16.8■□□□□ 0.28
SHMT2-202ENST00000414700 PAK2Q13177 524 aa16.8■□□□□ 0.28
SHMT2-202ENST00000414700 ARID5BQ14865 1188 aa16.8■□□□□ 0.28
SHMT2-202ENST00000414700 PSMD6Q15008 389 aa16.8■□□□□ 0.28
SHMT2-202ENST00000414700 C1orf53Q5VUE5 145 aa16.8■□□□□ 0.28
SHMT2-202ENST00000414700 SCARA3Q6AZY7 606 aa16.8■□□□□ 0.28
SHMT2-202ENST00000414700 LRRC8DQ7L1W4 858 aa16.8■□□□□ 0.28
SHMT2-202ENST00000414700 TMEM130Q8N3G9 435 aa16.8■□□□□ 0.28
SHMT2-202ENST00000414700 L2HGDHQ9H9P8 463 aa16.8■□□□□ 0.28
SHMT2-202ENST00000414700 FHOD1Q9Y613 1164 aa16.8■□□□□ 0.28
SHMT2-202ENST00000414700 RNF225M0QZC1 329 aaPredicted RBP16.8■□□□□ 0.28
SHMT2-202ENST00000414700 EPHB6O15197 1021 aa16.8■□□□□ 0.28
SHMT2-202ENST00000414700 TWF2Q6IBS0 349 aaKnown RBP16.8■□□□□ 0.28
SHMT2-202ENST00000414700 TMC2Q8TDI7 906 aa16.8■□□□□ 0.28
SHMT2-202ENST00000414700 TMEM117Q9H0C3 514 aa16.8■□□□□ 0.28
SHMT2-202ENST00000414700 SNTG2Q9NY99 539 aa16.8■□□□□ 0.28
SHMT2-202ENST00000414700 FEZ2Q9UHY8 353 aaPredicted RBP16.8■□□□□ 0.28
SHMT2-202ENST00000414700 A0A1W2PQC6 194 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 DCDC2CA8MYV0 355 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 GPR182O15218 404 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 SELPP16109 830 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 SLC9A1P19634 815 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 PPP2R3AQ06190 1150 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 SLC10A6Q3KNW5 377 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 OR5B17Q8NGF7 314 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 FNBP1Q96RU3 617 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 APOL6Q9BWW8 343 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 PPP1R12CQ9BZL4 782 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 TRIM6Q9C030 488 aaPredicted RBP16.79■□□□□ 0.28
SHMT2-202ENST00000414700 RNF39Q9H2S5 420 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 FAM207AQ9NSI2 230 aaPredicted RBP16.79■□□□□ 0.28
SHMT2-202ENST00000414700 RNF19AQ9NV58 838 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 TANC1Q9C0D5 1861 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 MEIS3P2A8K0S8 358 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 TLR3O15455 904 aaKnown RBP16.79■□□□□ 0.28
SHMT2-202ENST00000414700 NBNO60934 754 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 GYPCP04921 128 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 CLTAP09496 248 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 ACTN1P12814 892 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 TNNI1P19237 187 aa16.79■□□□□ 0.28
SHMT2-202ENST00000414700 AKAP5P24588 427 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms