RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 TESMINQ9Y4I5 508 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 CAPN14A8MX76 684 aa4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 SNRPA1P09661 255 aaKnown RBP4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 FPR1P21462 350 aa4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 ALDH1A3P47895 512 aa4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 CLRN1P58418 232 aa4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 TLE1Q04724 770 aa4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 CSRP2Q16527 193 aa4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 PGS1Q32NB8 556 aa4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 SPATS1Q496A3 300 aa4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 DACT2Q5SW24 774 aa4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 IFIT1BQ5T764 474 aaKnown RBP4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 LCE4AQ5TA78 99 aa4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 THEMIS2Q5TEJ8 643 aa4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 C1QL3Q5VWW1 255 aa4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 ANKS6Q68DC2 871 aa4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 CATIPQ7Z7H3 387 aa4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 SGMS1Q86VZ5 419 aa4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 PLXDC1Q8IUK5 500 aa4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 FMNL3Q8IVF7 1028 aa4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 DRC7Q8IY82 874 aa4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 SLC35B2Q8TB61 432 aa4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 DVL3Q92997 716 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 C1GALT1C1Q96EU7 318 aa4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 CLPTM1LQ96KA5 538 aa4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 C8orf49Q96NF6 230 aa4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 CPPED1Q9BRF8 314 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 CPEB1Q9BZB8 566 aaKnown RBP4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 KLC2Q9H0B6 622 aa4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 HDAC5Q9UQL6 1122 aa4.96□□□□□ -1.62
HMGB1P11-201ENST00000413899 KLRG2A4D1S0 409 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 PRR5-ARHGAP8B1AHC4 643 aa4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 PRPF3O43395 683 aaKnown RBP4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 ZNF20P17024 532 aa4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 ATP5JP18859 108 aa4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 ACRV1P26436 265 aa4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 IL12RB1P42701 662 aa4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 PRKD1Q15139 912 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 VPS72Q15906 364 aa4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 MINDY4Q4G0A6 757 aa4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 RSPH3Q86UC2 560 aa4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 GSPT2Q8IYD1 628 aaKnown RBP4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 MYO1HQ8N1T3 1032 aa4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 FBXO18Q8NFZ0 1043 aa4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 ZFP28Q8NHY6 868 aa4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 SLC35G2Q8TBE7 412 aa4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 DIS3LQ8TF46 1054 aaKnown RBP4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 STON2Q8WXE9 905 aa4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 TSR2Q969E8 191 aaKnown RBP4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 RUNDC1Q96C34 613 aa4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 CLIP3Q96DZ5 547 aa4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 TMX3Q96JJ7 454 aa4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 TAAR9Q96RI9 348 aa4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 ADOQ96SZ5 270 aa4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 CDK5RAP1Q96SZ6 601 aaKnown RBP4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 MRI1Q9BV20 369 aa4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 ANLNQ9NQW6 1124 aa4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 AURKAIP1Q9NWT8 199 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 CHPF2Q9P2E5 772 aa4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 SLC23A1Q9UHI7 598 aa4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 POLHQ9Y253 713 aa4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 ACTL7AQ9Y615 435 aa4.95□□□□□ -1.62
HMGB1P11-201ENST00000413899 KRTAP9-7A8MTY7 169 aa4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 GOLGA6L6A8MZA4 724 aa4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 H3BML4 177 aa4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 ERC2O15083 957 aa4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 MUSKO15146 869 aa4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 AP1G1O43747 822 aa4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 ARIH2O95376 493 aa4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 MGAT1P26572 445 aa4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 HIBADHP31937 336 aaKnown RBP4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 MAN2A2P49641 1150 aa4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 HK3P52790 923 aa4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 ADAM17P78536 824 aa4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 MLC1Q15049 377 aa4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 CDSNQ15517 529 aa4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 EFCAB12Q6NXP0 572 aa4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 ZNF585AQ6P3V2 769 aa4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 XYLT1Q86Y38 959 aa4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 C3orf20Q8ND61 904 aa4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 ATXN2LQ8WWM7 1075 aaKnown RBP4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 TFAP2CQ92754 450 aa4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 RGMAQ96B86 450 aa4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 MNTQ99583 582 aa4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 GPR87Q9BY21 358 aa4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 KMT5AQ9NQR1 393 aa4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 MAN1C1Q9NR34 630 aa4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 NOB1Q9ULX3 412 aaKnown RBP4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 TSC22D4Q9Y3Q8 395 aa4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 PNPLA7Q6ZV29 1317 aa4.94□□□□□ -1.62
HMGB1P11-201ENST00000413899 C1QTNF3-AMACRE9PGA6 284 aa4.93□□□□□ -1.62
HMGB1P11-201ENST00000413899 AMHP03971 560 aa4.93□□□□□ -1.62
HMGB1P11-201ENST00000413899 RAP2AP10114 183 aa4.93□□□□□ -1.62
HMGB1P11-201ENST00000413899 MALP21145 153 aa4.93□□□□□ -1.62
HMGB1P11-201ENST00000413899 SCNN1GP51170 649 aa4.93□□□□□ -1.62
HMGB1P11-201ENST00000413899 NOGQ13253 232 aa4.93□□□□□ -1.62
HMGB1P11-201ENST00000413899 ZNF267Q14586 743 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P11-201ENST00000413899 ATP2B3Q16720 1220 aa4.93□□□□□ -1.62
HMGB1P11-201ENST00000413899 GADL1Q6ZQY3 521 aa4.93□□□□□ -1.62
HMGB1P11-201ENST00000413899 Q6ZRM9 215 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms