RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 NRP1O14786 923 aa14.38□□□□□ -0.11
HDAC8-210ENST00000412342 OGTO15294 1046 aa14.38□□□□□ -0.11
HDAC8-210ENST00000412342 ADRB2P07550 413 aa14.38□□□□□ -0.11
HDAC8-210ENST00000412342 KCNE1P15382 129 aa14.38□□□□□ -0.11
HDAC8-210ENST00000412342 ALDH7A1P49419 539 aaKnown RBP14.38□□□□□ -0.11
HDAC8-210ENST00000412342 ERVFC1P60507 584 aa14.38□□□□□ -0.11
HDAC8-210ENST00000412342 TUSC3Q13454 348 aa14.38□□□□□ -0.11
HDAC8-210ENST00000412342 PTPROQ16827 1216 aa14.38□□□□□ -0.11
HDAC8-210ENST00000412342 KMT5BQ4FZB7 885 aa14.38□□□□□ -0.11
HDAC8-210ENST00000412342 GLRA4Q5JXX5 417 aa14.38□□□□□ -0.11
HDAC8-210ENST00000412342 RNF168Q8IYW5 571 aaPredicted RBP14.38□□□□□ -0.11
HDAC8-210ENST00000412342 KIAA0895Q8NCT3 520 aa14.38□□□□□ -0.11
HDAC8-210ENST00000412342 ACAP3Q96P50 834 aa14.38□□□□□ -0.11
HDAC8-210ENST00000412342 PAAF1Q9BRP4 392 aa14.38□□□□□ -0.11
HDAC8-210ENST00000412342 CACNG4Q9UBN1 327 aa14.38□□□□□ -0.11
HDAC8-210ENST00000412342 CPSF3Q9UKF6 684 aaKnown RBP14.38□□□□□ -0.11
HDAC8-210ENST00000412342 PCDHGC5Q9Y5F6 944 aa14.38□□□□□ -0.11
HDAC8-210ENST00000412342 UBE4BO95155 1302 aa14.38□□□□□ -0.11
HDAC8-210ENST00000412342 SMIM28A0A1B0GU29 152 aa14.37□□□□□ -0.11
HDAC8-210ENST00000412342 TTC26A0AVF1 554 aa14.37□□□□□ -0.11
HDAC8-210ENST00000412342 CARNS1A5YM72 827 aa14.37□□□□□ -0.11
HDAC8-210ENST00000412342 GOLGA6L4A6NEF3 574 aa14.37□□□□□ -0.11
HDAC8-210ENST00000412342 TGFB1I1O43294 461 aa14.37□□□□□ -0.11
HDAC8-210ENST00000412342 NR1I2O75469 434 aa14.37□□□□□ -0.11
HDAC8-210ENST00000412342 RPN1P04843 607 aaKnown RBP14.37□□□□□ -0.11
HDAC8-210ENST00000412342 THP07101 528 aa14.37□□□□□ -0.11
HDAC8-210ENST00000412342 CLTAP09496 248 aa14.37□□□□□ -0.11
HDAC8-210ENST00000412342 CXCL8P10145 99 aa14.37□□□□□ -0.11
HDAC8-210ENST00000412342 SOX4Q06945 474 aaPredicted RBP14.37□□□□□ -0.11
HDAC8-210ENST00000412342 STK4Q13043 487 aa14.37□□□□□ -0.11
HDAC8-210ENST00000412342 ENOX2Q16206 610 aaKnown RBP14.37□□□□□ -0.11
HDAC8-210ENST00000412342 TIGD5Q53EQ6 642 aa14.37□□□□□ -0.11
HDAC8-210ENST00000412342 SLFN12LQ6IEE8 588 aa14.37□□□□□ -0.11
HDAC8-210ENST00000412342 CRELD2Q6UXH1 353 aaPredicted RBP14.37□□□□□ -0.11
HDAC8-210ENST00000412342 ZSWIM2Q8NEG5 633 aa14.37□□□□□ -0.11
HDAC8-210ENST00000412342 TIGD1Q96MW7 591 aa14.37□□□□□ -0.11
HDAC8-210ENST00000412342 FAM193BQ96PV7 902 aaPredicted RBP14.37□□□□□ -0.11
HDAC8-210ENST00000412342 MSTO1Q9BUK6 570 aa14.37□□□□□ -0.11
HDAC8-210ENST00000412342 TMEM206Q9H813 350 aa14.37□□□□□ -0.11
HDAC8-210ENST00000412342 SLC39A2Q9NP94 309 aa14.37□□□□□ -0.11
HDAC8-210ENST00000412342 TOPORSQ9NS56 1045 aaPredicted RBP14.37□□□□□ -0.11
HDAC8-210ENST00000412342 EXOC7Q9UPT5 735 aa14.37□□□□□ -0.11
HDAC8-210ENST00000412342 PRUNE2Q8WUY3 3088 aa14.37□□□□□ -0.11
HDAC8-210ENST00000412342 RHOBTB3O94955 611 aa14.36□□□□□ -0.11
HDAC8-210ENST00000412342 ALDH2P05091 517 aa14.36□□□□□ -0.11
HDAC8-210ENST00000412342 OR1G1P47890 313 aa14.36□□□□□ -0.11
HDAC8-210ENST00000412342 YARSP54577 528 aaKnown RBP14.36□□□□□ -0.11
HDAC8-210ENST00000412342 COL19A1Q14993 1142 aa14.36□□□□□ -0.11
HDAC8-210ENST00000412342 POSTNQ15063 836 aa14.36□□□□□ -0.11
HDAC8-210ENST00000412342 CCDC85BQ15834 202 aaPredicted RBP14.36□□□□□ -0.11
HDAC8-210ENST00000412342 KYAT1Q16773 422 aa14.36□□□□□ -0.11
HDAC8-210ENST00000412342 DDX53Q86TM3 631 aaKnown RBP14.36□□□□□ -0.11
HDAC8-210ENST00000412342 MICALL1Q8N3F8 863 aa14.36□□□□□ -0.11
HDAC8-210ENST00000412342 TMEM169Q96HH4 297 aa14.36□□□□□ -0.11
HDAC8-210ENST00000412342 CBWD1Q9BRT8 395 aa14.36□□□□□ -0.11
HDAC8-210ENST00000412342 ZBP1Q9H171 429 aa14.36□□□□□ -0.11
HDAC8-210ENST00000412342 NSUN3Q9H649 340 aaKnown RBP14.36□□□□□ -0.11
HDAC8-210ENST00000412342 PLEKHA5Q9HAU0 1116 aa14.36□□□□□ -0.11
HDAC8-210ENST00000412342 TLR9Q9NR96 1032 aa14.36□□□□□ -0.11
HDAC8-210ENST00000412342 AGO2Q9UKV8 859 aaKnown RBP14.36□□□□□ -0.11
HDAC8-210ENST00000412342 FAN1Q9Y2M0 1017 aa14.36□□□□□ -0.11
HDAC8-210ENST00000412342 PRG3Q9Y2Y8 225 aaPredicted RBP14.36□□□□□ -0.11
HDAC8-210ENST00000412342 VWA8A3KMH1 1905 aa14.36□□□□□ -0.11
HDAC8-210ENST00000412342 BRWD1Q9NSI6 2320 aa14.35□□□□□ -0.11
HDAC8-210ENST00000412342 CASTOR2A6NHX0 329 aa14.35□□□□□ -0.11
HDAC8-210ENST00000412342 CSPG5O95196 566 aa14.35□□□□□ -0.11
HDAC8-210ENST00000412342 GARTP22102 1010 aa14.35□□□□□ -0.11
HDAC8-210ENST00000412342 IGFBP6P24592 240 aaPredicted RBP14.35□□□□□ -0.11
HDAC8-210ENST00000412342 MATR3P43243 847 aaKnown RBP eCLIP14.35□□□□□ -0.11
HDAC8-210ENST00000412342 ACOT2P49753 483 aa14.35□□□□□ -0.11
HDAC8-210ENST00000412342 PSMD2Q13200 908 aa14.35□□□□□ -0.11
HDAC8-210ENST00000412342 PNOCQ13519 176 aa14.35□□□□□ -0.11
HDAC8-210ENST00000412342 KCNB1Q14721 858 aa14.35□□□□□ -0.11
HDAC8-210ENST00000412342 ZBTB6Q15916 424 aa14.35□□□□□ -0.11
HDAC8-210ENST00000412342 TCEAL5Q5H9L2 206 aa14.35□□□□□ -0.11
HDAC8-210ENST00000412342 KANK3Q6NY19 840 aa14.35□□□□□ -0.11
HDAC8-210ENST00000412342 CD300LGQ6UXG3 332 aa14.35□□□□□ -0.11
HDAC8-210ENST00000412342 STXBP4Q6ZWJ1 553 aa14.35□□□□□ -0.11
HDAC8-210ENST00000412342 ADGRD2Q7Z7M1 963 aa14.35□□□□□ -0.11
HDAC8-210ENST00000412342 ELOA2Q8IYF1 753 aaPredicted RBP14.35□□□□□ -0.11
HDAC8-210ENST00000412342 SPATA20Q8TB22 786 aa14.35□□□□□ -0.11
HDAC8-210ENST00000412342 POMGNT1Q8WZA1 660 aa14.35□□□□□ -0.11
HDAC8-210ENST00000412342 RABGGTAQ92696 567 aa14.35□□□□□ -0.11
HDAC8-210ENST00000412342 GOLGA2P5Q9HBQ8 144 aa14.35□□□□□ -0.11
HDAC8-210ENST00000412342 EXOC1Q9NV70 894 aa14.35□□□□□ -0.11
HDAC8-210ENST00000412342 LACTBL1A8MY62 500 aa14.34□□□□□ -0.11
HDAC8-210ENST00000412342 TMEM189-UBE2V1I3L0A0 370 aa14.34□□□□□ -0.11
HDAC8-210ENST00000412342 KIF4AO95239 1232 aa14.34□□□□□ -0.11
HDAC8-210ENST00000412342 WNT7BP56706 349 aa14.34□□□□□ -0.11
HDAC8-210ENST00000412342 POU5F1Q01860 360 aaKnown RBP14.34□□□□□ -0.11
HDAC8-210ENST00000412342 KRT17Q04695 432 aa14.34□□□□□ -0.11
HDAC8-210ENST00000412342 HYAL1Q12794 435 aa14.34□□□□□ -0.11
HDAC8-210ENST00000412342 HSP90AA2PQ14568 343 aaPredicted RBP14.34□□□□□ -0.11
HDAC8-210ENST00000412342 SYCP3Q8IZU3 236 aa14.34□□□□□ -0.11
HDAC8-210ENST00000412342 TMEM130Q8N3G9 435 aa14.34□□□□□ -0.11
HDAC8-210ENST00000412342 C3orf58Q8NDZ4 430 aa14.34□□□□□ -0.11
HDAC8-210ENST00000412342 PPM1EQ8WY54 764 aa14.34□□□□□ -0.11
HDAC8-210ENST00000412342 C18orf25Q96B23 403 aaPredicted RBP14.34□□□□□ -0.11
HDAC8-210ENST00000412342 TCF25Q9BQ70 676 aa14.34□□□□□ -0.11
HDAC8-210ENST00000412342 PRDM6Q9NQX0 595 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms