RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 LY86O95711 162 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 PYGLP06737 847 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 HNRNPLP14866 589 aaKnown RBP eCLIP5.36□□□□□ -1.55
BRCA1-204ENST00000412061 GSPT1P15170 499 aaKnown RBP5.36□□□□□ -1.55
BRCA1-204ENST00000412061 PPM1AP35813 382 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 PIK3CBP42338 1070 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 PRIM2P49643 509 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 MEOX1P50221 254 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 TNFAIP2Q03169 654 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 CD69Q07108 199 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 CFAP161Q6P656 301 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 TLDC1Q6P9B6 456 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 NPNTQ6UXI9 565 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 ATG14Q6ZNE5 492 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 MIGA2Q7L4E1 593 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 DPP9Q86TI2 863 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 REXO1L1PQ8IX06 675 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 UNC5BQ8IZJ1 945 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 PRR18Q8N4B5 295 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 GPR156Q8NFN8 814 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 NUDT10Q8NFP7 164 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 RIN2Q8WYP3 895 aaPredicted RBP5.36□□□□□ -1.55
BRCA1-204ENST00000412061 HDAC10Q969S8 669 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 GCC1Q96CN9 775 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 NUDT11Q96G61 164 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 UIMC1Q96RL1 719 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 B3GNT5Q9BYG0 378 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 NUP62CLQ9H1M0 184 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 AGO4Q9HCK5 861 aaKnown RBP5.36□□□□□ -1.55
BRCA1-204ENST00000412061 EPB41L4AQ9HCS5 686 aaPredicted RBP5.36□□□□□ -1.55
BRCA1-204ENST00000412061 DMRT3Q9NQL9 472 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 GPRC5BQ9NZH0 403 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 L1RE1Q9UN81 338 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 LIMCH1Q9UPQ0 1083 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 KCTD3Q9Y597 815 aa5.36□□□□□ -1.55
BRCA1-204ENST00000412061 RPTORQ8N122 1335 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 A0A1W2PR48 441 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 SH3D21A4FU49 640 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 M0R3H8 397 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 B3GALT2O43825 422 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 PHF2O75151 1096 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 TMEM127O75204 238 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 LTA4HP09960 611 aaKnown RBP5.35□□□□□ -1.55
BRCA1-204ENST00000412061 GAAP10253 952 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 TNFSF4P23510 183 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 EDNRBP24530 442 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 CACNB3P54284 484 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 EIF5P55010 431 aaKnown RBP5.35□□□□□ -1.55
BRCA1-204ENST00000412061 DLX2Q07687 328 aaPredicted RBP5.35□□□□□ -1.55
BRCA1-204ENST00000412061 PPP3CAQ08209 521 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 MGAT2Q10469 447 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 PPFIA1Q13136 1202 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 NOMO1Q15155 1222 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 PGS1Q32NB8 556 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 VWA3BQ502W6 1294 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 CCDC184Q52MB2 194 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 PRR16Q569H4 304 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 ZNF385BQ569K4 471 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 TRIM68Q6AZZ1 485 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 Q6ZUG5 572 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 GPR155Q7Z3F1 870 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 MARCH10Q8NA82 808 aaPredicted RBP5.35□□□□□ -1.55
BRCA1-204ENST00000412061 NAXEQ8NCW5 288 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 KIAA1191Q96A73 305 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 PPM1MQ96MI6 270 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 YTHDC1Q96MU7 727 aaKnown RBP5.35□□□□□ -1.55
BRCA1-204ENST00000412061 KATNBL1Q9H079 304 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 TMEM168Q9H0V1 697 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 CERS4Q9HA82 394 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 ASAP1Q9ULH1 1129 aa5.35□□□□□ -1.55
BRCA1-204ENST00000412061 LRRFIP2Q9Y608 721 aaKnown RBP5.35□□□□□ -1.55
BRCA1-204ENST00000412061 KPNA5O15131 536 aa5.34□□□□□ -1.55
BRCA1-204ENST00000412061 AKR1B10O60218 316 aa5.34□□□□□ -1.55
BRCA1-204ENST00000412061 PRAMEF4O60810 478 aa5.34□□□□□ -1.55
BRCA1-204ENST00000412061 CYP1A1P04798 512 aaPredicted RBP5.34□□□□□ -1.55
BRCA1-204ENST00000412061 RPLP2P05387 115 aaKnown RBP5.34□□□□□ -1.55
BRCA1-204ENST00000412061 MCCP23508 829 aa5.34□□□□□ -1.55
BRCA1-204ENST00000412061 RRM1P23921 792 aa5.34□□□□□ -1.55
BRCA1-204ENST00000412061 CTSSP25774 331 aa5.34□□□□□ -1.55
BRCA1-204ENST00000412061 CNGB1Q14028 1251 aaPredicted RBP5.34□□□□□ -1.55
BRCA1-204ENST00000412061 PDE1CQ14123 709 aaPredicted RBP5.34□□□□□ -1.55
BRCA1-204ENST00000412061 PCOLCEQ15113 449 aa5.34□□□□□ -1.55
BRCA1-204ENST00000412061 CNN3Q15417 329 aaKnown RBP5.34□□□□□ -1.55
BRCA1-204ENST00000412061 C3orf36Q3SXR2 165 aa5.34□□□□□ -1.55
BRCA1-204ENST00000412061 CCDC38Q502W7 563 aa5.34□□□□□ -1.55
BRCA1-204ENST00000412061 DGKKQ5KSL6 1271 aa5.34□□□□□ -1.55
BRCA1-204ENST00000412061 TAS1R1Q7RTX1 841 aa5.34□□□□□ -1.55
BRCA1-204ENST00000412061 KRT78Q8N1N4 520 aa5.34□□□□□ -1.55
BRCA1-204ENST00000412061 PIK3C3Q8NEB9 887 aa5.34□□□□□ -1.55
BRCA1-204ENST00000412061 NSUN6Q8TEA1 469 aaKnown RBP5.34□□□□□ -1.55
BRCA1-204ENST00000412061 SNX33Q8WV41 574 aa5.34□□□□□ -1.55
BRCA1-204ENST00000412061 SNRNP27Q8WVK2 155 aaKnown RBP5.34□□□□□ -1.55
BRCA1-204ENST00000412061 DPF2Q92785 391 aa5.34□□□□□ -1.55
BRCA1-204ENST00000412061 LPPQ93052 612 aa5.34□□□□□ -1.55
BRCA1-204ENST00000412061 TBC1D20Q96BZ9 403 aa5.34□□□□□ -1.55
BRCA1-204ENST00000412061 AJUBAQ96IF1 538 aa5.34□□□□□ -1.55
BRCA1-204ENST00000412061 SLC38A3Q99624 504 aa5.34□□□□□ -1.55
BRCA1-204ENST00000412061 C7orf25Q9BPX7 421 aa5.34□□□□□ -1.55
BRCA1-204ENST00000412061 CARD11Q9BXL7 1154 aa5.34□□□□□ -1.55
BRCA1-204ENST00000412061 BARX1Q9HBU1 254 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms