RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 HOOK1Q9UJC3 728 aaKnown RBP11.9□□□□□ -0.5
CHMP3-205ENST00000409810 PRG3Q9Y2Y8 225 aaPredicted RBP11.9□□□□□ -0.5
CHMP3-205ENST00000409810 A0A0B4J269 797 aa11.89□□□□□ -0.51
CHMP3-205ENST00000409810 PTGESO14684 152 aa11.89□□□□□ -0.51
CHMP3-205ENST00000409810 NRP1O14786 923 aa11.89□□□□□ -0.51
CHMP3-205ENST00000409810 KIAA0391O15091 583 aaKnown RBP11.89□□□□□ -0.51
CHMP3-205ENST00000409810 XPOTO43592 962 aaKnown RBP11.89□□□□□ -0.51
CHMP3-205ENST00000409810 PRPF6O94906 941 aaKnown RBP11.89□□□□□ -0.51
CHMP3-205ENST00000409810 KCNE1P15382 129 aa11.89□□□□□ -0.51
CHMP3-205ENST00000409810 CASP5P51878 434 aa11.89□□□□□ -0.51
CHMP3-205ENST00000409810 FAM160A1Q05DH4 1040 aa11.89□□□□□ -0.51
CHMP3-205ENST00000409810 PSMD2Q13200 908 aa11.89□□□□□ -0.51
CHMP3-205ENST00000409810 SMC1AQ14683 1233 aaKnown RBP11.89□□□□□ -0.51
CHMP3-205ENST00000409810 XKR4Q5GH76 650 aa11.89□□□□□ -0.51
CHMP3-205ENST00000409810 GLRA4Q5JXX5 417 aa11.89□□□□□ -0.51
CHMP3-205ENST00000409810 PLPP4Q5VZY2 271 aa11.89□□□□□ -0.51
CHMP3-205ENST00000409810 TMC7Q7Z402 723 aa11.89□□□□□ -0.51
CHMP3-205ENST00000409810 CD302Q8IX05 232 aa11.89□□□□□ -0.51
CHMP3-205ENST00000409810 GRAMD1CQ8IYS0 662 aa11.89□□□□□ -0.51
CHMP3-205ENST00000409810 VPS52Q8N1B4 723 aa11.89□□□□□ -0.51
CHMP3-205ENST00000409810 UROC1Q96N76 676 aa11.89□□□□□ -0.51
CHMP3-205ENST00000409810 TSPAN18Q96SJ8 248 aa11.89□□□□□ -0.51
CHMP3-205ENST00000409810 CDCA3Q99618 268 aaPredicted RBP11.89□□□□□ -0.51
CHMP3-205ENST00000409810 THEGQ9P2T0 379 aa11.89□□□□□ -0.51
CHMP3-205ENST00000409810 AGO2Q9UKV8 859 aaKnown RBP11.89□□□□□ -0.51
CHMP3-205ENST00000409810 COG5Q9UP83 839 aa11.89□□□□□ -0.51
CHMP3-205ENST00000409810 STYXL1Q9Y6J8 313 aa11.89□□□□□ -0.51
CHMP3-205ENST00000409810 REV3LO60673 3130 aa11.88□□□□□ -0.51
CHMP3-205ENST00000409810 SMIM28A0A1B0GU29 152 aa11.88□□□□□ -0.51
CHMP3-205ENST00000409810 CASTOR2A6NHX0 329 aa11.88□□□□□ -0.51
CHMP3-205ENST00000409810 FSCN2O14926 492 aa11.88□□□□□ -0.51
CHMP3-205ENST00000409810 B4GALT3O60512 393 aa11.88□□□□□ -0.51
CHMP3-205ENST00000409810 KIF20AO95235 890 aa11.88□□□□□ -0.51
CHMP3-205ENST00000409810 LDHAP00338 332 aaKnown RBP11.88□□□□□ -0.51
CHMP3-205ENST00000409810 CXCL8P10145 99 aa11.88□□□□□ -0.51
CHMP3-205ENST00000409810 GARTP22102 1010 aa11.88□□□□□ -0.51
CHMP3-205ENST00000409810 DNAJB1P25685 340 aa11.88□□□□□ -0.51
CHMP3-205ENST00000409810 CASP1P29466 404 aa11.88□□□□□ -0.51
CHMP3-205ENST00000409810 CA8P35219 290 aa11.88□□□□□ -0.51
CHMP3-205ENST00000409810 SNRPFP62306 86 aaKnown RBP11.88□□□□□ -0.51
CHMP3-205ENST00000409810 POU5F1Q01860 360 aaKnown RBP11.88□□□□□ -0.51
CHMP3-205ENST00000409810 EHHADHQ08426 723 aa11.88□□□□□ -0.51
CHMP3-205ENST00000409810 CAMK1Q14012 370 aa11.88□□□□□ -0.51
CHMP3-205ENST00000409810 HSP90AA2PQ14568 343 aaPredicted RBP11.88□□□□□ -0.51
CHMP3-205ENST00000409810 TCEAL5Q5H9L2 206 aa11.88□□□□□ -0.51
CHMP3-205ENST00000409810 ARMCX5Q6P1M9 558 aa11.88□□□□□ -0.51
CHMP3-205ENST00000409810 SLC39A4Q6P5W5 647 aa11.88□□□□□ -0.51
CHMP3-205ENST00000409810 ALKAL1Q6UXT8 129 aa11.88□□□□□ -0.51
CHMP3-205ENST00000409810 TMEM173Q86WV6 379 aaPredicted RBP11.88□□□□□ -0.51
CHMP3-205ENST00000409810 TMEM87AQ8NBN3 555 aa11.88□□□□□ -0.51
CHMP3-205ENST00000409810 DDX27Q96GQ7 796 aaKnown RBP11.88□□□□□ -0.51
CHMP3-205ENST00000409810 IPO9Q96P70 1041 aaKnown RBP11.88□□□□□ -0.51
CHMP3-205ENST00000409810 PPP1R10Q96QC0 940 aaKnown RBP11.88□□□□□ -0.51
CHMP3-205ENST00000409810 FGFBP2Q9BYJ0 223 aa11.88□□□□□ -0.51
CHMP3-205ENST00000409810 HAPLN2Q9GZV7 340 aa11.88□□□□□ -0.51
CHMP3-205ENST00000409810 MARCH5Q9NX47 278 aa11.88□□□□□ -0.51
CHMP3-205ENST00000409810 SSX2IPQ9Y2D8 614 aa11.88□□□□□ -0.51
CHMP3-205ENST00000409810 SF3B1O75533 1304 aaKnown RBP eCLIP11.87□□□□□ -0.51
CHMP3-205ENST00000409810 ANKRD63C9JTQ0 380 aa11.87□□□□□ -0.51
CHMP3-205ENST00000409810 TADA2AO75478 443 aa11.87□□□□□ -0.51
CHMP3-205ENST00000409810 SOD2P04179 222 aa11.87□□□□□ -0.51
CHMP3-205ENST00000409810 RPN1P04843 607 aaKnown RBP11.87□□□□□ -0.51
CHMP3-205ENST00000409810 URODP06132 367 aa11.87□□□□□ -0.51
CHMP3-205ENST00000409810 SRGAP2BP0DMP2 458 aa11.87□□□□□ -0.51
CHMP3-205ENST00000409810 CTSAP10619 480 aa11.87□□□□□ -0.51
CHMP3-205ENST00000409810 IRS1P35568 1242 aa11.87□□□□□ -0.51
CHMP3-205ENST00000409810 TNFSF9P41273 254 aa11.87□□□□□ -0.51
CHMP3-205ENST00000409810 ERVFC1P60507 584 aa11.87□□□□□ -0.51
CHMP3-205ENST00000409810 KCNA1Q09470 495 aa11.87□□□□□ -0.51
CHMP3-205ENST00000409810 ELAVL2Q12926 359 aaKnown RBP11.87□□□□□ -0.51
CHMP3-205ENST00000409810 BMT2Q1RMZ1 405 aa11.87□□□□□ -0.51
CHMP3-205ENST00000409810 SLC10A6Q3KNW5 377 aa11.87□□□□□ -0.51
CHMP3-205ENST00000409810 KMT5BQ4FZB7 885 aa11.87□□□□□ -0.51
CHMP3-205ENST00000409810 SEZ6Q53EL9 994 aa11.87□□□□□ -0.51
CHMP3-205ENST00000409810 FUT10Q6P4F1 479 aa11.87□□□□□ -0.51
CHMP3-205ENST00000409810 EPM2AIP1Q7L775 607 aaPredicted RBP11.87□□□□□ -0.51
CHMP3-205ENST00000409810 HS2ST1Q7LGA3 356 aa11.87□□□□□ -0.51
CHMP3-205ENST00000409810 FMR1NBQ8N0W7 255 aaPredicted RBP11.87□□□□□ -0.51
CHMP3-205ENST00000409810 ZNF507Q8TCN5 953 aa11.87□□□□□ -0.51
CHMP3-205ENST00000409810 HLA-CQ95604 372 aa11.87□□□□□ -0.51
CHMP3-205ENST00000409810 HPS3Q969F9 1004 aa11.87□□□□□ -0.51
CHMP3-205ENST00000409810 TIGD1Q96MW7 591 aa11.87□□□□□ -0.51
CHMP3-205ENST00000409810 HERC2P3Q9BVR0 1158 aa11.87□□□□□ -0.51
CHMP3-205ENST00000409810 ZBP1Q9H171 429 aa11.87□□□□□ -0.51
CHMP3-205ENST00000409810 TLE6Q9H808 572 aa11.87□□□□□ -0.51
CHMP3-205ENST00000409810 SLC39A2Q9NP94 309 aa11.87□□□□□ -0.51
CHMP3-205ENST00000409810 CGNQ9P2M7 1197 aaKnown RBP11.87□□□□□ -0.51
CHMP3-205ENST00000409810 CPSF3Q9UKF6 684 aaKnown RBP11.87□□□□□ -0.51
CHMP3-205ENST00000409810 ADAM28Q9UKQ2 775 aa11.87□□□□□ -0.51
CHMP3-205ENST00000409810 VWA8A3KMH1 1905 aa11.86□□□□□ -0.51
CHMP3-205ENST00000409810 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.86□□□□□ -0.51
CHMP3-205ENST00000409810 TTC26A0AVF1 554 aa11.86□□□□□ -0.51
CHMP3-205ENST00000409810 TISP43B9A030 160 aa11.86□□□□□ -0.51
CHMP3-205ENST00000409810 TMEM189-UBE2V1I3L0A0 370 aa11.86□□□□□ -0.51
CHMP3-205ENST00000409810 KLRC4O43908 158 aa11.86□□□□□ -0.51
CHMP3-205ENST00000409810 FAM189A1O60320 539 aa11.86□□□□□ -0.51
CHMP3-205ENST00000409810 KINO60870 393 aaKnown RBP11.86□□□□□ -0.51
CHMP3-205ENST00000409810 IL18RAPO95256 599 aa11.86□□□□□ -0.51
CHMP3-205ENST00000409810 RPL9P32969 192 aaKnown RBP11.86□□□□□ -0.51
CHMP3-205ENST00000409810 ACOT2P49753 483 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms