RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 ARL5CA6NH57 179 aa18.07■□□□□ 0.48
SUMO1-208ENST00000409627 SLC16A3O15427 465 aaKnown RBP18.07■□□□□ 0.48
SUMO1-208ENST00000409627 CASP4P49662 377 aa18.07■□□□□ 0.48
SUMO1-208ENST00000409627 PPP2R3AQ06190 1150 aa18.07■□□□□ 0.48
SUMO1-208ENST00000409627 ANO6Q4KMQ2 910 aa18.07■□□□□ 0.48
SUMO1-208ENST00000409627 NOMO2Q5JPE7 1267 aa18.07■□□□□ 0.48
SUMO1-208ENST00000409627 CEP135Q66GS9 1140 aa18.07■□□□□ 0.48
SUMO1-208ENST00000409627 FAM117BQ6P1L5 589 aa18.07■□□□□ 0.48
SUMO1-208ENST00000409627 CMTR2Q8IYT2 770 aaKnown RBP18.07■□□□□ 0.48
SUMO1-208ENST00000409627 CSGALNACT2Q8N6G5 542 aa18.07■□□□□ 0.48
SUMO1-208ENST00000409627 GSTCDQ8NEC7 633 aa18.07■□□□□ 0.48
SUMO1-208ENST00000409627 URGCPQ8TCY9 931 aa18.07■□□□□ 0.48
SUMO1-208ENST00000409627 NOC3LQ8WTT2 800 aaKnown RBP18.07■□□□□ 0.48
SUMO1-208ENST00000409627 CASD1Q96PB1 797 aa18.07■□□□□ 0.48
SUMO1-208ENST00000409627 RPS6KC1Q96S38 1066 aa18.07■□□□□ 0.48
SUMO1-208ENST00000409627 BPIFA3Q9BQP9 254 aa18.07■□□□□ 0.48
SUMO1-208ENST00000409627 MRPL9Q9BYD2 267 aaKnown RBP18.07■□□□□ 0.48
SUMO1-208ENST00000409627 NAT10Q9H0A0 1025 aaKnown RBP18.07■□□□□ 0.48
SUMO1-208ENST00000409627 GZF1Q9H116 711 aaPredicted RBP18.07■□□□□ 0.48
SUMO1-208ENST00000409627 ASB7Q9H672 318 aa18.07■□□□□ 0.48
SUMO1-208ENST00000409627 CNTN3Q9P232 1028 aa18.07■□□□□ 0.48
SUMO1-208ENST00000409627 INSL6Q9Y581 213 aa18.07■□□□□ 0.48
SUMO1-208ENST00000409627 KIAA1671Q9BY89 1806 aa18.07■□□□□ 0.48
SUMO1-208ENST00000409627 TBKBP1A7MCY6 615 aa18.06■□□□□ 0.48
SUMO1-208ENST00000409627 AKAP3O75969 853 aa18.06■□□□□ 0.48
SUMO1-208ENST00000409627 IL18RAPO95256 599 aa18.06■□□□□ 0.48
SUMO1-208ENST00000409627 FGFR1OPO95684 399 aaKnown RBP18.06■□□□□ 0.48
SUMO1-208ENST00000409627 KCNE1P15382 129 aa18.06■□□□□ 0.48
SUMO1-208ENST00000409627 PSMC2P35998 433 aaKnown RBP18.06■□□□□ 0.48
SUMO1-208ENST00000409627 GATMP50440 423 aa18.06■□□□□ 0.48
SUMO1-208ENST00000409627 CYP24A1Q07973 514 aa18.06■□□□□ 0.48
SUMO1-208ENST00000409627 RDH13Q8NBN7 331 aa18.06■□□□□ 0.48
SUMO1-208ENST00000409627 ENOX1Q8TC92 643 aaKnown RBP18.06■□□□□ 0.48
SUMO1-208ENST00000409627 MFSD14AQ96MC6 490 aa18.06■□□□□ 0.48
SUMO1-208ENST00000409627 ZFP42Q96MM3 310 aa18.06■□□□□ 0.48
SUMO1-208ENST00000409627 TSPAN18Q96SJ8 248 aa18.06■□□□□ 0.48
SUMO1-208ENST00000409627 YME1L1Q96TA2 773 aa18.06■□□□□ 0.48
SUMO1-208ENST00000409627 RAD9AQ99638 391 aa18.06■□□□□ 0.48
SUMO1-208ENST00000409627 ZBED2Q9BTP6 218 aa18.06■□□□□ 0.48
SUMO1-208ENST00000409627 KANSL3Q9P2N6 904 aa18.06■□□□□ 0.48
SUMO1-208ENST00000409627 INPP5FQ9Y2H2 1132 aa18.06■□□□□ 0.48
SUMO1-208ENST00000409627 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.05■□□□□ 0.48
SUMO1-208ENST00000409627 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.05■□□□□ 0.48
SUMO1-208ENST00000409627 LACTBL1A8MY62 500 aa18.05■□□□□ 0.48
SUMO1-208ENST00000409627 PTGESO14684 152 aa18.05■□□□□ 0.48
SUMO1-208ENST00000409627 TLL1O43897 1013 aa18.05■□□□□ 0.48
SUMO1-208ENST00000409627 CAVIN2O95810 425 aa18.05■□□□□ 0.48
SUMO1-208ENST00000409627 EPB41P11171 864 aaKnown RBP18.05■□□□□ 0.48
SUMO1-208ENST00000409627 SCNN1GP51170 649 aa18.05■□□□□ 0.48
SUMO1-208ENST00000409627 AFF1P51825 1210 aaKnown RBP18.05■□□□□ 0.48
SUMO1-208ENST00000409627 ZNF445P59923 1031 aa18.05■□□□□ 0.48
SUMO1-208ENST00000409627 ENPEPQ07075 957 aa18.05■□□□□ 0.48
SUMO1-208ENST00000409627 GRIK3Q13003 919 aa18.05■□□□□ 0.48
SUMO1-208ENST00000409627 PSMD6Q15008 389 aa18.05■□□□□ 0.48
SUMO1-208ENST00000409627 SURF1Q15526 300 aa18.05■□□□□ 0.48
SUMO1-208ENST00000409627 SPATA1Q5VX52 437 aa18.05■□□□□ 0.48
SUMO1-208ENST00000409627 FAM109BQ6ICB4 259 aaPredicted RBP18.05■□□□□ 0.48
SUMO1-208ENST00000409627 LRSAM1Q6UWE0 723 aa18.05■□□□□ 0.48
SUMO1-208ENST00000409627 FILIP1Q7Z7B0 1213 aa18.05■□□□□ 0.48
SUMO1-208ENST00000409627 FAM186BQ8IYM0 893 aa18.05■□□□□ 0.48
SUMO1-208ENST00000409627 LRRC43Q8N309 656 aa18.05■□□□□ 0.48
SUMO1-208ENST00000409627 SP7Q8TDD2 431 aaPredicted RBP18.05■□□□□ 0.48
SUMO1-208ENST00000409627 CXCL16Q9H2A7 254 aa18.05■□□□□ 0.48
SUMO1-208ENST00000409627 DERAQ9Y315 318 aa18.05■□□□□ 0.48
SUMO1-208ENST00000409627 NLRC5Q86WI3 1866 aa18.05■□□□□ 0.48
SUMO1-208ENST00000409627 SMIM28A0A1B0GU29 152 aa18.04■□□□□ 0.48
SUMO1-208ENST00000409627 GRXCR1A8MXD5 290 aa18.04■□□□□ 0.48
SUMO1-208ENST00000409627 WNT7BP56706 349 aa18.04■□□□□ 0.48
SUMO1-208ENST00000409627 INTS8Q75QN2 995 aaKnown RBP18.04■□□□□ 0.48
SUMO1-208ENST00000409627 NT5DC4Q86YG4 428 aa18.04■□□□□ 0.48
SUMO1-208ENST00000409627 FAM212AQ96EL1 285 aa18.04■□□□□ 0.48
SUMO1-208ENST00000409627 EEF2KMTQ96G04 330 aa18.04■□□□□ 0.48
SUMO1-208ENST00000409627 ZMAT2Q96NC0 199 aaKnown RBP18.04■□□□□ 0.48
SUMO1-208ENST00000409627 PPP1R10Q96QC0 940 aaKnown RBP18.04■□□□□ 0.48
SUMO1-208ENST00000409627 SRRTQ9BXP5 876 aaKnown RBP18.04■□□□□ 0.48
SUMO1-208ENST00000409627 TBC1D13Q9NVG8 400 aa18.04■□□□□ 0.48
SUMO1-208ENST00000409627 MIOSQ9NXC5 875 aa18.04■□□□□ 0.48
SUMO1-208ENST00000409627 PCDHA11Q9Y5I1 949 aa18.04■□□□□ 0.48
SUMO1-208ENST00000409627 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.04■□□□□ 0.48
SUMO1-208ENST00000409627 GNA14O95837 355 aa18.03■□□□□ 0.48
SUMO1-208ENST00000409627 POMCP01189 267 aa18.03■□□□□ 0.48
SUMO1-208ENST00000409627 THP07101 528 aa18.03■□□□□ 0.48
SUMO1-208ENST00000409627 RABGGTBP53611 331 aa18.03■□□□□ 0.48
SUMO1-208ENST00000409627 MCCD1P59942 119 aaPredicted RBP18.03■□□□□ 0.48
SUMO1-208ENST00000409627 MYL5Q02045 173 aa18.03■□□□□ 0.48
SUMO1-208ENST00000409627 BTG3Q14201 252 aaPredicted RBP18.03■□□□□ 0.48
SUMO1-208ENST00000409627 TPD52L1Q16890 204 aaPredicted RBP18.03■□□□□ 0.48
SUMO1-208ENST00000409627 PAN2Q504Q3 1202 aaKnown RBP18.03■□□□□ 0.48
SUMO1-208ENST00000409627 GLRA4Q5JXX5 417 aa18.03■□□□□ 0.48
SUMO1-208ENST00000409627 TMC2Q8TDI7 906 aa18.03■□□□□ 0.48
SUMO1-208ENST00000409627 BORCS6Q96GS4 357 aa18.03■□□□□ 0.48
SUMO1-208ENST00000409627 THAP9Q9H5L6 903 aa18.03■□□□□ 0.48
SUMO1-208ENST00000409627 METTL14Q9HCE5 456 aaKnown RBP18.03■□□□□ 0.48
SUMO1-208ENST00000409627 PDE11AQ9HCR9 933 aa18.03■□□□□ 0.48
SUMO1-208ENST00000409627 SLC38A7Q9NVC3 462 aa18.03■□□□□ 0.48
SUMO1-208ENST00000409627 PLAGL2Q9UPG8 496 aa18.03■□□□□ 0.48
SUMO1-208ENST00000409627 COLQQ9Y215 455 aaPredicted RBP18.03■□□□□ 0.48
SUMO1-208ENST00000409627 C2CD2Q9Y426 696 aa18.03■□□□□ 0.48
SUMO1-208ENST00000409627 NFE2L3Q9Y4A8 694 aa18.03■□□□□ 0.48
SUMO1-208ENST00000409627 IKBKBO14920 756 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms