RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 PPP2R5CQ13362 524 aa14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 EMC2Q15006 297 aa14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 CAMK4Q16566 473 aa14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 AMHR2Q16671 573 aa14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 CPLX2Q6PUV4 134 aaKnown RBP14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 SASS6Q6UVJ0 657 aa14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 MOXD1Q6UVY6 613 aa14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 PRSS55Q6UWB4 352 aaPredicted RBP14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 PARM1Q6UWI2 310 aa14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 CCDC73Q6ZRK6 1079 aa14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 CDR2LQ86X02 465 aaPredicted RBP14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 SUMF1Q8NBK3 374 aa14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 HAS1Q92839 578 aa14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 PRKD2Q9BZL6 878 aa14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 NXF3Q9H4D5 531 aaKnown RBP14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 KCNMB3Q9NPA1 279 aa14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 XPNPEP1Q9NQW7 623 aa14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 SLC2A4RGQ9NR83 387 aa14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 KCNJ14Q9UNX9 436 aa14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 MTF2Q9Y483 593 aaPredicted RBP14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 GPR179Q6PRD1 2367 aa14.03□□□□□ -0.16
CHRNA1-205ENST00000409542 CEP250Q9BV73 2442 aa14.03□□□□□ -0.16
CHRNA1-205ENST00000409542 AKAP5P24588 427 aa14.03□□□□□ -0.16
CHRNA1-205ENST00000409542 RFC5P40937 340 aa14.03□□□□□ -0.16
CHRNA1-205ENST00000409542 PTENP60484 403 aa14.03□□□□□ -0.16
CHRNA1-205ENST00000409542 GUCY1B3Q02153 619 aa14.03□□□□□ -0.16
CHRNA1-205ENST00000409542 FAM160A1Q05DH4 1040 aa14.03□□□□□ -0.16
CHRNA1-205ENST00000409542 SSRP1Q08945 709 aaKnown RBP14.03□□□□□ -0.16
CHRNA1-205ENST00000409542 FUT10Q6P4F1 479 aa14.03□□□□□ -0.16
CHRNA1-205ENST00000409542 DAGLBQ8NCG7 672 aa14.03□□□□□ -0.16
CHRNA1-205ENST00000409542 CNNM3Q8NE01 707 aa14.03□□□□□ -0.16
CHRNA1-205ENST00000409542 ENGASEQ8NFI3 743 aa14.03□□□□□ -0.16
CHRNA1-205ENST00000409542 PJA1Q8NG27 643 aa14.03□□□□□ -0.16
CHRNA1-205ENST00000409542 HDAC7Q8WUI4 952 aa14.03□□□□□ -0.16
CHRNA1-205ENST00000409542 DYDC2Q96IM9 177 aa14.03□□□□□ -0.16
CHRNA1-205ENST00000409542 HINFPQ9BQA5 517 aa14.03□□□□□ -0.16
CHRNA1-205ENST00000409542 PAAF1Q9BRP4 392 aa14.03□□□□□ -0.16
CHRNA1-205ENST00000409542 CSRNP2Q9H175 543 aa14.03□□□□□ -0.16
CHRNA1-205ENST00000409542 PLEKHA4Q9H4M7 779 aa14.03□□□□□ -0.16
CHRNA1-205ENST00000409542 CBX8Q9HC52 389 aa14.03□□□□□ -0.16
CHRNA1-205ENST00000409542 UBN1Q9NPG3 1134 aa14.03□□□□□ -0.16
CHRNA1-205ENST00000409542 ZDHHC7Q9NXF8 308 aa14.03□□□□□ -0.16
CHRNA1-205ENST00000409542 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.03□□□□□ -0.16
CHRNA1-205ENST00000409542 KLK14Q9P0G3 267 aa14.03□□□□□ -0.16
CHRNA1-205ENST00000409542 NCOR2Q9Y618 2525 aa14.02□□□□□ -0.16
CHRNA1-205ENST00000409542 STK36Q9NRP7 1315 aa14.02□□□□□ -0.16
CHRNA1-205ENST00000409542 ARID2Q68CP9 1835 aa14.02□□□□□ -0.16
CHRNA1-205ENST00000409542 B4GALT5O43286 388 aa14.02□□□□□ -0.16
CHRNA1-205ENST00000409542 ERLIN2O94905 339 aa14.02□□□□□ -0.16
CHRNA1-205ENST00000409542 YWHABP31946 246 aaKnown RBP14.02□□□□□ -0.16
CHRNA1-205ENST00000409542 STARD6P59095 220 aa14.02□□□□□ -0.16
CHRNA1-205ENST00000409542 SNW1Q13573 536 aaKnown RBP14.02□□□□□ -0.16
CHRNA1-205ENST00000409542 CTTNQ14247 550 aaKnown RBP14.02□□□□□ -0.16
CHRNA1-205ENST00000409542 ANO6Q4KMQ2 910 aa14.02□□□□□ -0.16
CHRNA1-205ENST00000409542 XKR9Q5GH70 373 aa14.02□□□□□ -0.16
CHRNA1-205ENST00000409542 RTP2Q5QGT7 225 aa14.02□□□□□ -0.16
CHRNA1-205ENST00000409542 GRASPQ7Z6J2 395 aaPredicted RBP14.02□□□□□ -0.16
CHRNA1-205ENST00000409542 C4orf19Q8IY42 314 aa14.02□□□□□ -0.16
CHRNA1-205ENST00000409542 ASAP3Q8TDY4 903 aa14.02□□□□□ -0.16
CHRNA1-205ENST00000409542 LXNQ9BS40 222 aa14.02□□□□□ -0.16
CHRNA1-205ENST00000409542 COLEC11Q9BWP8 271 aa14.02□□□□□ -0.16
CHRNA1-205ENST00000409542 GOLPH3LQ9H4A5 285 aa14.02□□□□□ -0.16
CHRNA1-205ENST00000409542 DLL3Q9NYJ7 618 aa14.02□□□□□ -0.16
CHRNA1-205ENST00000409542 FNIP2Q9P278 1114 aa14.02□□□□□ -0.16
CHRNA1-205ENST00000409542 DPP7Q9UHL4 492 aa14.02□□□□□ -0.16
CHRNA1-205ENST00000409542 ASAP2O43150 1006 aa14.01□□□□□ -0.17
CHRNA1-205ENST00000409542 ZMYND10O75800 440 aa14.01□□□□□ -0.17
CHRNA1-205ENST00000409542 TPM2P07951 284 aa14.01□□□□□ -0.17
CHRNA1-205ENST00000409542 ARF4P18085 180 aaPredicted RBP14.01□□□□□ -0.17
CHRNA1-205ENST00000409542 FSHRP23945 695 aa14.01□□□□□ -0.17
CHRNA1-205ENST00000409542 CEBPZQ03701 1054 aaKnown RBP14.01□□□□□ -0.17
CHRNA1-205ENST00000409542 MBTD1Q05BQ5 628 aa14.01□□□□□ -0.17
CHRNA1-205ENST00000409542 CAPSQ13938 189 aa14.01□□□□□ -0.17
CHRNA1-205ENST00000409542 PUM1Q14671 1186 aaKnown RBP eCLIP14.01□□□□□ -0.17
CHRNA1-205ENST00000409542 EPHA7Q15375 998 aa14.01□□□□□ -0.17
CHRNA1-205ENST00000409542 USP41Q3LFD5 358 aa14.01□□□□□ -0.17
CHRNA1-205ENST00000409542 ADALQ6DHV7 355 aa14.01□□□□□ -0.17
CHRNA1-205ENST00000409542 LINC00301Q8NCQ3 95 aa14.01□□□□□ -0.17
CHRNA1-205ENST00000409542 TCP11Q8WWU5 503 aa14.01□□□□□ -0.17
CHRNA1-205ENST00000409542 RUBCNQ92622 972 aa14.01□□□□□ -0.17
CHRNA1-205ENST00000409542 FAM20AQ96MK3 541 aa14.01□□□□□ -0.17
CHRNA1-205ENST00000409542 MTRQ99707 1265 aa14.01□□□□□ -0.17
CHRNA1-205ENST00000409542 CXCL16Q9H2A7 254 aa14.01□□□□□ -0.17
CHRNA1-205ENST00000409542 GJB4Q9NTQ9 266 aa14.01□□□□□ -0.17
CHRNA1-205ENST00000409542 ADAM28Q9UKQ2 775 aa14.01□□□□□ -0.17
CHRNA1-205ENST00000409542 GIT1Q9Y2X7 761 aa14.01□□□□□ -0.17
CHRNA1-205ENST00000409542 MIA3Q5JRA6 1907 aa14□□□□□ -0.17
CHRNA1-205ENST00000409542 NOTCH4Q99466 2003 aa14□□□□□ -0.17
CHRNA1-205ENST00000409542 A0A087WWV3 80 aa14□□□□□ -0.17
CHRNA1-205ENST00000409542 GOLGA6L6A8MZA4 724 aa14□□□□□ -0.17
CHRNA1-205ENST00000409542 INO80B-WBP1J3KQ70 363 aa14□□□□□ -0.17
CHRNA1-205ENST00000409542 ADAM12O43184 909 aa14□□□□□ -0.17
CHRNA1-205ENST00000409542 AP5Z1O43299 807 aa14□□□□□ -0.17
CHRNA1-205ENST00000409542 KINO60870 393 aaKnown RBP14□□□□□ -0.17
CHRNA1-205ENST00000409542 DEXIO95424 95 aa14□□□□□ -0.17
CHRNA1-205ENST00000409542 AXLP30530 894 aa14□□□□□ -0.17
CHRNA1-205ENST00000409542 ME1P48163 572 aa14□□□□□ -0.17
CHRNA1-205ENST00000409542 CYP4A11Q02928 519 aa14□□□□□ -0.17
CHRNA1-205ENST00000409542 SPIRE1Q08AE8 756 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms