RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 RNF149Q8NC42 400 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 CAGE1Q8TC20 777 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 HELQQ8TDG4 1101 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 CTNNBL1Q8WYA6 563 aaPredicted RBP6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 SHC3Q92529 594 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 SEMA4DQ92854 862 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 COPS5Q92905 334 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 OSBPL9Q96SU4 736 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 PTPN18Q99952 460 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 TINF2Q9BSI4 451 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 TLR10Q9BXR5 811 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 PARD6BQ9BYG5 372 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 LOC285556D6RIA3 1793 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 RBBP6Q7Z6E9 1792 aaKnown RBP6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 ADGRA2Q96PE1 1338 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 MANSC4A6NHS7 340 aaPredicted RBP6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 ACKR2O00590 384 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 SRGAP2O75044 1071 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 ERLIN1O75477 346 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 C4BPAP04003 597 aaKnown RBP6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 PRKCBP05771 671 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 INSRRP14616 1297 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 TMOD1P28289 359 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 USP8P40818 1118 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 ACOT2P49753 483 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 HUNKP57058 714 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 NLRP11P59045 1033 aaKnown RBP6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 ACVR2BQ13705 512 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 RPS6KA1Q15418 735 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 ZACNQ401N2 412 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 CFAP221Q4G0U5 840 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 DUSP28Q4G0W2 176 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 MEI1Q5TIA1 1274 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 CCDC181Q5TID7 509 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 CST9Q5W186 159 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 CRELD2Q6UXH1 353 aaPredicted RBP6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 ZNF572Q7Z3I7 529 aaPredicted RBP6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 TRIM50Q86XT4 487 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 RHPN2Q8IUC4 686 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 METTL13Q8N6R0 699 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 MSANTD4Q8NCY6 345 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 TAS1R2Q8TE23 839 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 ZNF516Q92618 1163 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 DHX38Q92620 1227 aaKnown RBP6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 TAF4BQ92750 862 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 MAML3Q96JK9 1138 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 ZBTB45Q96K62 511 aaPredicted RBP6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 MMS19Q96T76 1030 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 ACO2Q99798 780 aaKnown RBP6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 PACSIN1Q9BY11 444 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 NFKBIZQ9BYH8 718 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 CCDC113Q9H0I3 377 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 ISCUQ9H1K1 167 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 FZD8Q9H461 694 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 RNPEPQ9H4A4 650 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 PDE11AQ9HCR9 933 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 RBAKQ9NYW8 714 aaPredicted RBP6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 PAPPA2Q9BXP8 1791 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 A0A0G2JMZ2 1700 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 CCDC151A5D8V7 595 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 CES2O00748 559 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 OGTO15294 1046 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 RTN2O75298 545 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 LRRN2O75325 713 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 LGALS2P05162 132 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 PNMA6AP0CW24 399 aaPredicted RBP6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 ADCYAP1R1P41586 468 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 ZNF157P51786 506 aaPredicted RBP6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 PTENP60484 403 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 CDC42EP1Q00587 391 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 POU5F1Q01860 360 aaKnown RBP6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 MCL1Q07820 350 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 DRP2Q13474 957 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 BIRC3Q13489 604 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 TCEAL1Q15170 157 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 TSHZ1Q6ZSZ6 1077 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 SLFN11Q7Z7L1 901 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 RHOT2Q8IXI1 618 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 LRRC71Q8N4P6 559 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 TPCN2Q8NHX9 752 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 LNX1Q8TBB1 728 aaPredicted RBP6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 PTCD2Q8WV60 388 aaKnown RBP6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 AFG1LQ8WV93 481 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 HNRNPLLQ8WVV9 542 aaKnown RBP6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 RFFLQ8WZ73 363 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 TATDN2Q93075 761 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 PBKQ96KB5 322 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 CAPZA3Q96KX2 299 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 KREMEN1Q96MU8 473 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 CGRRF1Q99675 332 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 SELENOOQ9BVL4 669 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 CCDC94Q9BW85 323 aaPredicted RBP6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 HAPLN2Q9GZV7 340 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 KATNBL1Q9H079 304 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 ARFGAP3Q9NP61 516 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 C1orf112Q9NSG2 853 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 SEPT11Q9NVA2 429 aaKnown RBP6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 ANKFY1Q9P2R3 1169 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 RAB21Q9UL25 225 aa6.75□□□□□ -1.33
GTF3C3-202ENST00000409364 WDR90Q96KV7 1748 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms